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FFCP PHASE1:Mm9::chr5:151062534..151062585,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320365
|EntrezGene=320365
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|UniProt=E9PVT7,E9Q8I9,Q4VA57,Q8BIX6,Q8BUA0
|association_with_transcript=29bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|association_with_transcript=29bp_to_ENSMUST00000052630,ENSMUST00000087204,NM_172887,uc009atv.2_5end
|cluster_id=chr5:151062534..151062585,+
|description=CAGE_peak_5_at_Fry_5end
|description=CAGE_peak_5_at_Fry_5end
|id=chr5:151062534..151062585,+
|id=chr5:151062534..151062585,+
|ontology_enrichment_celltype=CL:0000117!2.12e-10!23;CL:0000337!2.12e-10!23;CL:0000540!3.01e-09!33;CL:0000047!3.01e-09!33;CL:0000031!3.01e-09!33;CL:0000404!3.01e-09!33
|ontology_enrichment_celltype=CL:0000117!2.12e-10!23;CL:0000337!2.12e-10!23;CL:0000540!3.01e-09!33;CL:0000047!3.01e-09!33;CL:0000031!3.01e-09!33;CL:0000404!3.01e-09!33
|ontology_enrichment_celltype_v019_2=CL:0000117,2.56e-11,23;CL:0000337,2.56e-11,23;CL:0000540,3.63e-08,33;CL:0000047,3.63e-08,33;CL:0000031,3.63e-08,33;CL:0000404,3.63e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!9.94e-20!102;UBERON:0000924!9.94e-20!102;UBERON:0006601!9.94e-20!102;UBERON:0002346!1.93e-17!71;UBERON:0003075!1.93e-17!71;UBERON:0007284!1.93e-17!71;UBERON:0001017!4.91e-17!73;UBERON:0005743!4.91e-17!73;UBERON:0000033!5.58e-17!63;UBERON:0001049!7.34e-17!52;UBERON:0005068!7.34e-17!52;UBERON:0006241!7.34e-17!52;UBERON:0007135!7.34e-17!52;UBERON:0000073!2.09e-16!75;UBERON:0001016!2.09e-16!75;UBERON:0000955!4.81e-16!50;UBERON:0006238!4.81e-16!50;UBERON:0002020!6.22e-16!34;UBERON:0002616!1.70e-15!49;UBERON:0003056!1.80e-13!49;UBERON:0002791!2.46e-13!29;UBERON:0003528!2.46e-13!29;UBERON:0001893!2.46e-13!29;UBERON:0003080!8.80e-13!40;UBERON:0002780!3.40e-12!39;UBERON:0001890!3.40e-12!39;UBERON:0006240!3.40e-12!39;UBERON:0000956!5.59e-09!21;UBERON:0001869!5.59e-09!21;UBERON:0000203!5.59e-09!21;UBERON:0002021!1.68e-08!10;UBERON:0000411!1.68e-08!10;UBERON:0001950!1.68e-08!10;UBERON:0002619!2.82e-08!17;UBERON:0007811!1.66e-07!86;UBERON:0000153!1.82e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.45e-26,54;UBERON:0001049,3.41e-24,52;UBERON:0005068,3.41e-24,52;UBERON:0006241,3.41e-24,52;UBERON:0007135,3.41e-24,52;UBERON:0004121,6.56e-24,95;UBERON:0000924,6.56e-24,95;UBERON:0006601,6.56e-24,95;UBERON:0001017,1.52e-23,73;UBERON:0001016,1.59e-22,75;UBERON:0002020,7.94e-22,34;UBERON:0010371,6.27e-21,73;UBERON:0002346,8.53e-21,64;UBERON:0003075,8.53e-21,64;UBERON:0007284,8.53e-21,64;UBERON:0000955,8.77e-20,47;UBERON:0006238,8.77e-20,47;UBERON:0002616,6.79e-19,46;UBERON:0003528,2.13e-17,29;UBERON:0002791,2.13e-17,29;UBERON:0001893,2.13e-17,29;UBERON:0003080,4.48e-16,40;UBERON:0002780,3.93e-15,39;UBERON:0001890,3.93e-15,39;UBERON:0006240,3.93e-15,39;UBERON:0003056,1.17e-14,49;UBERON:0002021,7.27e-14,10;UBERON:0000411,7.27e-14,10;UBERON:0001950,7.27e-14,10;UBERON:0010314,8.28e-14,92;UBERON:0002619,1.44e-11,17;UBERON:0000956,3.39e-10,21;UBERON:0001869,3.39e-10,21;UBERON:0000203,3.39e-10,21;UBERON:0002420,5.07e-09,8;UBERON:0007245,5.07e-09,8;UBERON:0010009,5.07e-09,8;UBERON:0010011,5.07e-09,8;UBERON:0000454,5.07e-09,8;UBERON:0003076,5.59e-09,12;UBERON:0003057,5.59e-09,12;UBERON:0000025,6.09e-07,114;UBERON:0004111,6.71e-07,122;UBERON:0002240,9.21e-07,6;UBERON:0005174,9.21e-07,6;UBERON:0001137,9.21e-07,6
|phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0.0992909512008853,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.630974884054146,3.14216082844184,1.98781686856452,0.61245399607477,0.670918297127655,1.83843757322004,13.2139057199266,9.44886301830389,7.68032666281217,3.82470234417562,4.02545631850602,3.64639359389732,8.09630697104005,5.06486349028512,5.34793867218835,4.71405736757868,4.27115042397309,2.60959224155421,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,1.29347577849275,0,0.247194967734374,1.15679485535929,0,0.808834249737046,0,0,0,29.5708604981663,24.0863712835473,0.510914110417183,0,0,0,10.0359728401231,12.3525162761029,2.89005009859588,18.5992022605736,19.1786592997748,9.55825004973976,13.7905073607594,0.407357455401265,0.373220911830279,0.505445516867349,0.631325567659422,0,0.229902104433473,0.720248519221397,1.35634336052144,0.476255494059295,0.768682321709099,1.03071897015702,3.3631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,1.66828349535359,0.348252166522167,1.64625709126355,0.199034266818493,0,0,0,2.27838349789052,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,0.308534225774757,0,0.536546802799238,0.116765342367169,0.987359099480883,1.14917224855367,0.405344047729279,0.438599962275997,0.219550115291051,0.268412837520744,17.6643556793867,2.6755199218614,0.991256348951394,0,0,0.232236671860439,0.515469845288373,0.605050573870028,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,1.18088118383682,1.255989822731,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,10.7568895291821,8.32202974804643,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.668396022247182,0.283076530788832,0.404810701674894,1.46127928955656,1.18586333383957,4.17717711348349,0.425820255624806,0,0.162886959353576,0.164970122972535,3.98235415019888,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,2.38307724027652,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,0.882113592219848,2.4732937941222,1.29171541356724,1.02531972377865,0.716234064018819,1.47726809770555,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.655087691238533,0.269728692769641,0.165306911450672,0.523511883968059,0.259229946583586,11.8054469486516,0,0,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0.501572104035363,16.3778034358949,19.7939851698086,18.3326564300607,19.0757032401493,26.0331357512844,30.215755895588,29.7009900101995,28.3702358031259,21.7508356312418,24.3347346523355,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,0,1.26348605881899,0.760437899670719,1.50901073108861,0.655490552289177,1.60062881012173,1.14870937911227,0.476293691283074,1.0429589335037,0.964546102318525,0.824171801606613,1.17759136107518,1.37147700954166,1.06485483695602,0,1.0174249164263,1.31753132581463,1.18460451048347,0.73171189149109,0.789209134313529,0.814824683075171,0,0.830445126869219,0.788035859004508,0,0.77468420592983,1.15743966588685,2.74791635731741,1.63752125911786,1.07435527024149,0.382576664137687,2.42650561031467,1.39120701372253
|phase1_expression=0,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16712121740242,0.0992909512008853,0,0.159992422793407,0.45881856213434,0,0,0.430942465371778,0.570070258369122,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,4.24864567805155,5.28990979272033,0.633831403506179,0,0,0,0,0,0,0,0.829516898467821,0.405017814995072,0.630974884054146,3.14216082844184,1.98781686856452,0.61245399607477,0.670918297127655,1.83843757322004,13.2139057199266,9.44886301830389,7.68032666281217,3.82470234417562,4.02545631850602,3.64639359389732,8.09630697104005,5.06486349028512,5.34793867218835,4.71405736757868,4.27115042397309,2.60959224155421,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0.539703191637817,0,0,1.12355536105401,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,1.29347577849275,0,0.247194967734374,1.15679485535929,0,0.808834249737046,0,0,0,29.5708604981663,24.0863712835473,0.510914110417183,0,0,0,10.0359728401231,12.3525162761029,2.89005009859588,18.5992022605736,19.1786592997748,9.55825004973976,13.7905073607594,0.407357455401265,0.373220911830279,0.505445516867349,0.631325567659422,0,0.229902104433473,0.720248519221397,1.35634336052144,0.476255494059295,0.768682321709099,1.03071897015702,3.3631438196072,0.215567992932842,0.567318240503458,0.175951124163949,0,1.66828349535359,0.348252166522167,1.64625709126355,0.199034266818493,0,0,0,2.27838349789052,0.469052119962192,0.720248245844059,0.473489471170421,0.393528463494808,0.308534225774757,0,0.536546802799238,0.116765342367169,0.987359099480883,1.14917224855367,0.405344047729279,0.438599962275997,0.219550115291051,0.268412837520744,17.6643556793867,2.6755199218614,0.991256348951394,0,0,0.232236671860439,0.515469845288373,0.605050573870028,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0.994782360205754,0.38992817423824,0.898819408654221,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.252946148497029,1.18088118383682,1.255989822731,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0,0.275936746304732,10.7568895291821,8.32202974804643,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0,0.668396022247182,0.283076530788832,0.404810701674894,1.46127928955656,1.18586333383957,4.17717711348349,0.425820255624806,0,0.162886959353576,0.164970122972535,3.98235415019888,0,0,0.188605079755898,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,1.05418608574999,2.06271086496374,2.38307724027652,0.18006109403131,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0.21183207086382,0.882113592219848,2.4732937941222,1.29171541356724,1.02531972377865,0.716234064018819,1.47726809770555,0,7.6024373824309,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0,0.655087691238533,0.269728692769641,0.165306911450672,0.523511883968059,0.259229946583586,11.8054469486516,0,0,0,0,0.129159823477731,0.506868376472335,0.117357238645754,0.2604087696879,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0.0962118416403295,0,1.36038230169127,0,0,0,0.965947970160952,0,0.183151624267265,0.214368379079066,0.501572104035363,16.3778034358949,19.7939851698086,18.3326564300607,19.0757032401493,26.0331357512844,30.215755895588,29.7009900101995,28.3702358031259,21.7508356312418,24.3347346523355,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.838452650511929,0.735374033800057,0.44449345560323,0.618105171716683,0,1.26348605881899,0.760437899670719,1.50901073108861,0.655490552289177,1.60062881012173,1.14870937911227,0.476293691283074,1.0429589335037,0.964546102318525,0.824171801606613,1.17759136107518,1.37147700954166,1.06485483695602,0,1.0174249164263,1.31753132581463,1.18460451048347,0.73171189149109,0.789209134313529,0.814824683075171,0,0.830445126869219,0.788035859004508,0,0.77468420592983,1.15743966588685,2.74791635731741,1.63752125911786,1.07435527024149,0.382576664137687,2.42650561031467,1.39120701372253
|short_description=p5@Fry
|short_description=p5@Fry
}}
}}

Latest revision as of 19:02, 25 September 2015

Short description:p5@Fry
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Fry_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 29bp_to_ENSMUST00000052630, ENSMUST00000087204, NM_172887, uc009atv.2_5end
EntrezGene:Fry
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Fry

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A410.04
corpus striatum, adult.CNhs10487.19-21D812.35
corpus striatum, neonate N00.CNhs11226.630-43F12.89
cortex, adult.CNhs10473.12-14D518.60
cortex, neonate N30.CNhs11107.1392-42F219.18
diencephalon, adult.CNhs10482.20-12F29.56
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E817.66
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C210.76
medulla oblongata, neonate N30.CNhs11200.1396-42A38.32
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.60
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.38
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.79
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.03
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A629.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.37
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.56e-1123
neuroblast (sensu Vertebrata)2.56e-1123
neuron3.63e-0833
neuronal stem cell3.63e-0833
neuroblast3.63e-0833
electrically signaling cell3.63e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.45e-2654
neural tube3.41e-2452
neural rod3.41e-2452
future spinal cord3.41e-2452
neural keel3.41e-2452
ectoderm-derived structure6.56e-2495
ectoderm6.56e-2495
presumptive ectoderm6.56e-2495
central nervous system1.52e-2373
nervous system1.59e-2275
gray matter7.94e-2234
ecto-epithelium6.27e-2173
neurectoderm8.53e-2164
neural plate8.53e-2164
presumptive neural plate8.53e-2164
brain8.77e-2047
future brain8.77e-2047
regional part of brain6.79e-1946
brain grey matter2.13e-1729
regional part of telencephalon2.13e-1729
telencephalon2.13e-1729
anterior neural tube4.48e-1640
regional part of forebrain3.93e-1539
forebrain3.93e-1539
future forebrain3.93e-1539
pre-chordal neural plate1.17e-1449
occipital lobe7.27e-1410
visual cortex7.27e-1410
neocortex7.27e-1410
structure with developmental contribution from neural crest8.28e-1492
regional part of cerebral cortex1.44e-1117
cerebral cortex3.39e-1021
cerebral hemisphere3.39e-1021
pallium3.39e-1021
basal ganglion5.07e-098
nuclear complex of neuraxis5.07e-098
aggregate regional part of brain5.07e-098
collection of basal ganglia5.07e-098
cerebral subcortex5.07e-098
posterior neural tube5.59e-0912
chordal neural plate5.59e-0912
tube6.09e-07114
anatomical conduit6.71e-07122
spinal cord9.21e-076
dorsal region element9.21e-076
dorsum9.21e-076
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