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FFCP PHASE1:Mm9::chr10:127896265..127896276,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:127896265..127896276,+
|DHSsupport=NA
|short_description=p4@Smarcc2
|DPIdataset=NA
|description=CAGE_peak_4_at_Smarcc2_5end
|association_with_transcript=-15bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|EntrezGene=68094
|EntrezGene=68094
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6PDG5,Q3UID0
|UniProt=Q6PDG5,Q3UID0
|association_with_transcript=-15bp_to_ENSMUST00000026433,ENSMUST00000099131,ENSMUST00000105235,NM_001114096,NM_001114097,NM_198160,uc007hmw.2,uc007hmx.2,uc007hmy.2_5end
|cluster_id=chr10:127896265..127896276,+
|description=CAGE_peak_4_at_Smarcc2_5end
|id=chr10:127896265..127896276,+
|ontology_enrichment_celltype=CL:0000117!4.84e-12!23;CL:0000337!4.84e-12!23;CL:0000540!3.29e-09!33;CL:0000047!3.29e-09!33;CL:0000031!3.29e-09!33;CL:0000404!3.29e-09!33;CL:0000393!1.47e-07!39;CL:0000211!1.47e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,8.28e-16,23;CL:0000337,8.28e-16,23;CL:0000540,1.62e-12,33;CL:0000047,1.62e-12,33;CL:0000031,1.62e-12,33;CL:0000404,1.62e-12,33;CL:0000393,1.15e-10,39;CL:0000211,1.15e-10,39;CL:0002319,1.97e-07,43;CL:0000221,4.55e-07,44;CL:0000133,4.55e-07,44;CL:0002609,8.19e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!2.66e-17!86;UBERON:0000153!6.63e-16!94;UBERON:0000033!1.87e-15!63;UBERON:0000955!7.52e-15!50;UBERON:0006238!7.52e-15!50;UBERON:0001049!7.81e-15!52;UBERON:0005068!7.81e-15!52;UBERON:0006241!7.81e-15!52;UBERON:0007135!7.81e-15!52;UBERON:0000073!2.28e-14!75;UBERON:0001016!2.28e-14!75;UBERON:0001017!2.47e-14!73;UBERON:0005743!2.47e-14!73;UBERON:0002616!2.52e-14!49;UBERON:0003056!3.41e-14!49;UBERON:0002020!5.40e-14!34;UBERON:0004121!4.14e-13!102;UBERON:0000924!4.14e-13!102;UBERON:0006601!4.14e-13!102;UBERON:0003080!6.38e-13!40;UBERON:0002791!8.03e-13!29;UBERON:0003528!8.03e-13!29;UBERON:0001893!8.03e-13!29;UBERON:0002780!2.54e-12!39;UBERON:0001890!2.54e-12!39;UBERON:0006240!2.54e-12!39;UBERON:0002346!5.82e-12!71;UBERON:0003075!5.82e-12!71;UBERON:0007284!5.82e-12!71;UBERON:0000956!4.52e-09!21;UBERON:0001869!4.52e-09!21;UBERON:0000203!4.52e-09!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-18,54;UBERON:0002346,5.54e-18,64;UBERON:0003075,5.54e-18,64;UBERON:0007284,5.54e-18,64;UBERON:0001017,6.51e-18,73;UBERON:0002020,1.10e-17,34;UBERON:0003056,2.55e-17,49;UBERON:0001049,4.15e-17,52;UBERON:0005068,4.15e-17,52;UBERON:0006241,4.15e-17,52;UBERON:0007135,4.15e-17,52;UBERON:0001016,6.28e-17,75;UBERON:0004121,9.90e-17,95;UBERON:0000924,9.90e-17,95;UBERON:0006601,9.90e-17,95;UBERON:0003528,2.18e-16,29;UBERON:0002791,2.18e-16,29;UBERON:0001893,2.18e-16,29;UBERON:0010371,3.04e-16,73;UBERON:0000955,1.58e-15,47;UBERON:0006238,1.58e-15,47;UBERON:0003080,7.32e-15,40;UBERON:0002616,7.58e-15,46;UBERON:0002780,4.57e-14,39;UBERON:0001890,4.57e-14,39;UBERON:0006240,4.57e-14,39;UBERON:0010314,1.42e-12,92;UBERON:0000956,5.23e-12,21;UBERON:0001869,5.23e-12,21;UBERON:0000203,5.23e-12,21;UBERON:0002619,1.05e-08,17;UBERON:0000483,9.02e-08,174;UBERON:0000119,1.97e-07,176
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951,0.335769232728157,0.965947970160952,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,1.89038500578056,2.05524755931193,4.5323633843382,2.70009000092722,2.2516060161211,4.98456649882625,4.65984280576638,1.14166082342594,0.798049746802062,1.36586884603307,0.972426868273176,1.04806581313991,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.936415074698824,1.21647789569252,0.918967503289812,0.476293691283074,1.0429589335037,0.77163688185482,3.29668720642645,0.883193520806384,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.658765662907314,0.761531471025089,1.64635175585495,0.789209134313529,0.679020569229309,0.561142271657738,0.474540072496697,0.985044823755635,1.22769312950907,1.08455788830176,1.73615949883027,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0
|phase1_expression=1.28119077683835,1.04692622291808,0,0.30246421130683,0,1.00727563147134,0.700837921786577,1.03298658753261,0,0,0.171217968225505,1.11681022593471,0.342401459862411,0.699363219351979,0.333109761815663,0.202475267389826,0.699561878128147,1.73504190947031,1.09691546884591,0.84877930359606,1.78590909317247,1.09220046320974,1.04479915655574,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.221730510655305,0.635030673459631,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,1.5626706890476,0,1.17646297606203,2.04913645487534,0,0.377690453926732,0.912392380975631,1.46837401729345,0,0.872100625521786,0,0.388859798148567,0.279972843250725,0,1.34226084846189,0.725362142011344,1.68046899571232,0,0,1.03134418455488,3.03474691289397,1.5869729378161,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0,0.599200221036809,0.384218305321555,5.59923906465779,4.05017814995072,3.36519938162211,1.71390590642282,0.662605622854841,3.91970557487853,6.80502844229478,2.75765635983006,1.10115880999389,3.70293280447044,4.6081959976873,3.56092976871523,5.12330804173494,3.12548022334056,5.02529398202486,1.12552522006336,3.20876320331301,1.47314292736834,1.28134512719193,3.72798891650601,0.832988126665025,0.906858721281426,0.579728977403356,0,0,0,0.649776417447669,0.448026887097336,0.421333260395256,1.02258193546835,0.519572009205738,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0.216491041011214,0.506719730950197,0,0.79928715803342,0.258937883647172,0.29688427812965,0.520455980298408,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.125666591329675,0.741584903203122,0.289198713839823,0,0.808834249737046,0.662524555381181,0,0,0.585561594023094,2.30391377494801,0.510914110417183,1.31796636956512,1.19980546198682,0.381210681219194,3.89455662452539,0.915001205637253,3.8952849154988,3.12883776346098,4.09144731728529,1.87009240103604,2.27137768294861,0.712875546952214,0.373220911830279,0.252722758433675,0,1.30120442962704,1.14951052216736,1.0803727788321,1.35634336052144,2.17716797284249,1.40925092313335,2.15513966487376,1.03481348295606,1.29340795759705,1.32374256117473,1.58356011747554,0.43839146485515,0.278047249225598,0,0.61734640922383,0.796137067273973,0,0.51469581422943,0.852490498186778,1.44988040774851,0.234526059981096,0.36012412292203,1.18372367792605,1.37734962223183,1.23413690309903,0.930135779001631,0.536546802799238,1.05088808130453,0.329119699826961,1.14917224855367,1.05389452409612,0.730999937126662,0.878200461164203,0,1.89260953707715,3.19004298375782,0.660837565967596,0,0.639864751605702,0.696710015581316,0.77320476793256,1.4117846723634,0.889512175379481,0.951128130562796,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.432276099749388,0.597423819763102,0.569003702859245,1.02823661348756,0,0.407302655690628,0.775809948670503,1.05203729835478,0.822074982615345,0.885660887877613,0.627994911365499,0,0.296452627087149,0.667380422864376,0.393117990226406,0.224862112384854,0.811440485554012,0.241177159752417,0,0.287696137450811,0.810676133875177,0,0,1.11642284300551,0.624075346229121,0.505157755894224,0.179397413521912,0,0.369506380333209,0,0.814824882210129,0.848725428875941,1.17345124144251,0.670025029767263,0.714130922658041,0.780534591431195,1.26108115284953,1.10732344824387,0.478364305972461,0.655453258862952,0.863424909329478,1.01254341007058,0,0,0.491764273019036,0.551873492609465,1.76605648986571,2.69586879162067,0.327869890753351,0.252470927204373,0,0,0.861693590931196,0,0.891194696329576,1.41538265394416,1.61924280669958,2.04579100537918,0.395287777946524,2.57057053137446,0,0.890328018336276,0.977321756121456,0.494910368917606,0,1.21390318077491,0.302323556964751,0.377210159511796,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.900305470156551,0.517434735131018,2.14337035031592,0.709360934569094,0.713475270408282,0.658196082408484,1.522324745573,0.23467170806371,0.21183207086382,0,0.98931751764888,0.322928853391811,0.904693873922338,1.55184047204077,1.47726809770555,0,2.78137953015765,0.512612642393558,0.619160603889667,0.555583582109135,1.13021074202815,1.0935538217682,0,2.20971958992012,0.839708713941948,0.967399816630967,0.954670618015114,1.42351197111511,1.21991680276109,0.324016022465404,0,0.436725127492355,0.674321731924103,0.247960367176008,0.26175594198403,0.129614973291793,0.621339313086926,0.56369293868419,0.299033092087958,0.66183396182839,0.777804753376191,1.03327858782185,0.844780627453891,0.704143431874524,0.39061315453185,1.36317147753424,1.69108884578204,1.15212002503146,1.26404448251271,0.810900861160657,0.821687657318618,1.29920822977795,1.43221356533985,0.79472541912506,2.88469078847925,1.9199638532695,2.62512769865184,2.057583779685,1.81487133246313,2.33898913775406,2.69393156592922,1.98690733708667,0.226730383615211,0,0.179427713218951,0.335769232728157,0.965947970160952,0.187682475451182,0.36630324853453,0.857473516316263,0.501572104035363,1.6942555278512,0.920650473014354,1.71868654031819,1.89038500578056,2.05524755931193,4.5323633843382,2.70009000092722,2.2516060161211,4.98456649882625,4.65984280576638,1.14166082342594,0.798049746802062,1.36586884603307,0.972426868273176,1.04806581313991,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0.25347929989024,0.188626341386076,0.936415074698824,1.21647789569252,0.918967503289812,0.476293691283074,1.0429589335037,0.77163688185482,3.29668720642645,0.883193520806384,0.342869252385415,0.887379030796687,0.715308569841963,0.726732083161643,0.658765662907314,0.761531471025089,1.64635175585495,0.789209134313529,0.679020569229309,0.561142271657738,0.474540072496697,0.985044823755635,1.22769312950907,1.08455788830176,1.73615949883027,0.249810577937946,0.701794825336225,0.859484216193193,0.382576664137687,0.441182838239031,0
|short_description=p4@Smarcc2
}}
}}

Latest revision as of 18:58, 25 September 2015

Short description:p4@Smarcc2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smarcc2_5end
Coexpression cluster:NA
Association with transcript: -15bp_to_ENSMUST00000026433, ENSMUST00000099131, ENSMUST00000105235, NM_001114096, NM_001114097, NM_198160, uc007hmw.2, uc007hmx.2, uc007hmy.2_5end
EntrezGene:Smarcc2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smarcc2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.10
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.60
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.81
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A43.89
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F13.90
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F24.09
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C62.18
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G13.19
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.90
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.42
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.36
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F82.88
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.69
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.92
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.00e-1854
neurectoderm5.54e-1864
neural plate5.54e-1864
presumptive neural plate5.54e-1864
central nervous system6.51e-1873
gray matter1.10e-1734
pre-chordal neural plate2.55e-1749
neural tube4.15e-1752
neural rod4.15e-1752
future spinal cord4.15e-1752
neural keel4.15e-1752
nervous system6.28e-1775
ectoderm-derived structure9.90e-1795
ectoderm9.90e-1795
presumptive ectoderm9.90e-1795
brain grey matter2.18e-1629
regional part of telencephalon2.18e-1629
telencephalon2.18e-1629
ecto-epithelium3.04e-1673
brain1.58e-1547
future brain1.58e-1547
anterior neural tube7.32e-1540
regional part of brain7.58e-1546
regional part of forebrain4.57e-1439
forebrain4.57e-1439
future forebrain4.57e-1439
structure with developmental contribution from neural crest1.42e-1292
cerebral cortex5.23e-1221
cerebral hemisphere5.23e-1221
pallium5.23e-1221
regional part of cerebral cortex1.05e-0817
epithelium9.02e-08174
cell layer1.97e-07176
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