FFCP PHASE1:Mm9::chr7:123647951..123647966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=53322 | |EntrezGene=53322 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=P81117,Q3UKN6 | |UniProt=P81117,Q3UKN6 | ||
|association_with_transcript=63bp_to_ENSMUST00000032895,NM_001130479,NM_016773,uc009jjj.2,uc009jjk.2_5end | |association_with_transcript=63bp_to_ENSMUST00000032895,NM_001130479,NM_016773,uc009jjj.2,uc009jjk.2_5end | ||
|cluster_id=chr7:123647951..123647966,+ | |||
|description=CAGE_peak_3_at_Nucb2_5end | |description=CAGE_peak_3_at_Nucb2_5end | ||
|id=chr7:123647951..123647966,+ | |id=chr7:123647951..123647966,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000464!1.80e-11!57;UBERON:0001264!1.91e-07!12;UBERON:0003922!1.91e-07!12;UBERON:0002114!1.91e-07!12;UBERON:0003923!1.91e-07!12;UBERON:0003924!1.91e-07!12;UBERON:0003921!1.91e-07!12;UBERON:0005153!2.99e-07!17;UBERON:0001045!3.38e-07!13;UBERON:0002108!3.79e-07!16;UBERON:0005178!5.38e-07!17;UBERON:0005181!5.38e-07!17;UBERON:0002224!5.38e-07!17;UBERON:0000915!5.38e-07!17;UBERON:0008947!5.38e-07!17;UBERON:0003258!5.38e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,8.40e-08,12;UBERON:0005153,3.15e-07,17;UBERON:0005178,5.76e-07,17;UBERON:0005181,5.76e-07,17;UBERON:0002224,5.76e-07,17;UBERON:0000915,5.76e-07,17;UBERON:0008947,5.76e-07,17;UBERON:0003258,5.76e-07,17 | |||
|phase1_expression=1.28119077683835,0.697950815278722,0,0,0,1.6787927191189,2.80335168714631,0.258246646883153,0.563154888606667,0.70219357896598,0.171217968225505,0,0,0.0874204024189974,0,0,0,0.630924330716475,1.64537320326887,2.54633791078818,3.57181818634493,0.297872853602656,0.261199789138935,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,1.939241094173,3.23039813075836,1.51218077855958,1.55211357458713,0.635030673459631,0.61506478758457,0,0,0,0,5.85944283031671,7.813353445238,6.80580867165938,5.88231488031014,5.46436387966757,6.311634589405,3.52511090331616,4.66333883609767,2.20256102594018,0,0.436050312760893,0,0.388859798148567,0,0,2.85230430298152,0,0.336093799142464,5.14518872071894,1.71920063963254,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.383381884072945,0,1.10115880999389,0.893811366596314,0.921639199537461,1.05509030184155,1.00636407962651,0.52091337055676,0,1.68828783009504,1.5279824777681,1.17851434189467,0.854230084794618,0,0.454357159999104,1.058001841495,7.24661221754194,0.860423876981386,0,0,0,0.448026887097336,10.3928870897496,2.38602451609281,1.55871602761721,1.7666978725517,0.845060518660083,2.56652954828636,0,0,11.2575341325831,11.6545538118545,12.1325866803548,8.5637909789295,6.73238497482646,2.52351636410202,0.346970653532272,1.52232739156071,1.61430848079241,1.3565037649736,2.82212897125692,0.879666139307728,2.47194967734374,1.73519228303894,1.76922110389975,2.91180329905337,1.54589062922275,3.39412677194655,1.86391761218122,0.878342391034642,0.209446706813455,10.2182822083437,0.479260498023681,0.599902730993408,0.635351135365324,0.898743836428936,1.37250180845588,0.628271760564322,1.91206752211504,0.767146371990992,1.0389402227978,1.1356888414743,2.54598409625791,17.1681619441928,104.879944749975,9.46988351489133,2.21204753036596,1.60931473103431,3.42118046630164,3.0140963567143,2.78949646520444,4.74020765053944,3.18585863503078,10.6068382002996,0.646703978798527,0.756424320671277,1.93546236580344,2.41115305670332,3.33656699070717,6.96504333044333,3.08673204611915,1.19420560091096,2.1066395619397,1.02939162845886,1.98914449576915,1.24275463521301,0.703578179943289,0.720248245844059,0.946978942340841,0.590292695242212,0.925602677324269,0.465067889500816,1.60964040839772,1.16765342367169,0.658239399653922,1.14917224855367,0.56748166682099,0.877199924551994,0.658650345873152,0.671032093801859,1.68231958851302,1.02904612379284,7.93005079161115,1.85115396664481,0.213288250535234,0.464473343720877,0.644337306610467,3.22693639397348,2.89091456998331,2.66315876557583,5.69434873853414,1.4822905925161,2.01068167040216,0.795825888164603,3.31438948102504,5.39291645192533,1.51296634912286,4.38110801159608,0.948339504765408,1.02823661348756,0,0.610953983535943,1.93952487167626,2.03393877681924,1.83385957660346,1.03327103585722,1.8839847340965,2.46794327843601,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,1.09824565275233,7.18841032636773,0.372140947668503,0.624075346229121,1.26289438973556,1.4351793081753,0.964887042726734,9.60716588866344,0.947457058852424,2.44447464663039,2.37643120085263,1.87752198630802,5.52770649557992,16.4250112211349,12.6836871107569,8.98520321405289,6.42247599981447,6.218735977642,13.109065177259,10.7064688756855,13.4523624480806,1.50791283939272,1.63171705145613,134.251646534197,44.1498794087572,1.12385412991454,0.586058432961016,2.13115428989678,1.51482556322624,1.89304931649754,0.780877488593277,5.38558494331997,4.06246956519338,1.78238939265915,1.41538265394416,2.02405350837447,2.63030272120181,1.18586333383957,1.92792789853084,6.67118400478862,0.890328018336276,1.79175655288934,7.25868541079156,176.551033992151,1.21390318077491,4.23252979750651,40.9273023070299,50.2013217897314,69.7877785832715,14.2135561242522,32.354501923498,28.8762876491624,143.48068810286,183.428378920498,136.138917087607,15.6602218646742,1.44048875225048,0.905510786479282,2.57204442037911,1.95074257006501,4.99432689285798,3.45552943264454,2.43571959291679,5.86679270159276,7.83778662196135,40.1361684460031,7.91454014119104,2.26050197374268,2.77439454669517,3.34242563208782,3.93938159388147,4.37221254944776,0.370850604021019,1.36696704638282,2.47664241555867,1.85194527369712,1.50694765603753,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0.552799895217695,16.2294005062569,1.89801596148681,3.04979200690273,2.80813886136683,6.690825472463,7.64268973111622,7.8221320903196,4.87655388779482,8.89970202745701,0.518459893167171,215.604741641163,2.25477175473676,0.448549638131936,0.496375471371293,2.33341426012857,1.54991788173277,1.520605129417,2.11243029562357,2.99470085141085,1.15345278868282,2.89900944991207,2.88030006257865,0.316011120628178,0.810900861160657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|phase1_expression=1.28119077683835,0.697950815278722,0,0,0,1.6787927191189,2.80335168714631,0.258246646883153,0.563154888606667,0.70219357896598,0.171217968225505,0,0,0.0874204024189974,0,0,0,0.630924330716475,1.64537320326887,2.54633791078818,3.57181818634493,0.297872853602656,0.261199789138935,0.799962113967033,0.22940928106717,0.57423196411502,0.430761996159075,1.939241094173,3.23039813075836,1.51218077855958,1.55211357458713,0.635030673459631,0.61506478758457,0,0,0,0,5.85944283031671,7.813353445238,6.80580867165938,5.88231488031014,5.46436387966757,6.311634589405,3.52511090331616,4.66333883609767,2.20256102594018,0,0.436050312760893,0,0.388859798148567,0,0,2.85230430298152,0,0.336093799142464,5.14518872071894,1.71920063963254,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0.889294796111139,0.449949858640699,0,0,0.299600110518405,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.244981598429908,0.383381884072945,0,1.10115880999389,0.893811366596314,0.921639199537461,1.05509030184155,1.00636407962651,0.52091337055676,0,1.68828783009504,1.5279824777681,1.17851434189467,0.854230084794618,0,0.454357159999104,1.058001841495,7.24661221754194,0.860423876981386,0,0,0,0.448026887097336,10.3928870897496,2.38602451609281,1.55871602761721,1.7666978725517,0.845060518660083,2.56652954828636,0,0,11.2575341325831,11.6545538118545,12.1325866803548,8.5637909789295,6.73238497482646,2.52351636410202,0.346970653532272,1.52232739156071,1.61430848079241,1.3565037649736,2.82212897125692,0.879666139307728,2.47194967734374,1.73519228303894,1.76922110389975,2.91180329905337,1.54589062922275,3.39412677194655,1.86391761218122,0.878342391034642,0.209446706813455,10.2182822083437,0.479260498023681,0.599902730993408,0.635351135365324,0.898743836428936,1.37250180845588,0.628271760564322,1.91206752211504,0.767146371990992,1.0389402227978,1.1356888414743,2.54598409625791,17.1681619441928,104.879944749975,9.46988351489133,2.21204753036596,1.60931473103431,3.42118046630164,3.0140963567143,2.78949646520444,4.74020765053944,3.18585863503078,10.6068382002996,0.646703978798527,0.756424320671277,1.93546236580344,2.41115305670332,3.33656699070717,6.96504333044333,3.08673204611915,1.19420560091096,2.1066395619397,1.02939162845886,1.98914449576915,1.24275463521301,0.703578179943289,0.720248245844059,0.946978942340841,0.590292695242212,0.925602677324269,0.465067889500816,1.60964040839772,1.16765342367169,0.658239399653922,1.14917224855367,0.56748166682099,0.877199924551994,0.658650345873152,0.671032093801859,1.68231958851302,1.02904612379284,7.93005079161115,1.85115396664481,0.213288250535234,0.464473343720877,0.644337306610467,3.22693639397348,2.89091456998331,2.66315876557583,5.69434873853414,1.4822905925161,2.01068167040216,0.795825888164603,3.31438948102504,5.39291645192533,1.51296634912286,4.38110801159608,0.948339504765408,1.02823661348756,0,0.610953983535943,1.93952487167626,2.03393877681924,1.83385957660346,1.03327103585722,1.8839847340965,2.46794327843601,1.1858105083486,0.166845105716094,0.393117990226406,0.224862112384854,0.608580364165509,0.482354319504834,0.763877555344259,0.575392274901621,0.486405680325106,1.09824565275233,7.18841032636773,0.372140947668503,0.624075346229121,1.26289438973556,1.4351793081753,0.964887042726734,9.60716588866344,0.947457058852424,2.44447464663039,2.37643120085263,1.87752198630802,5.52770649557992,16.4250112211349,12.6836871107569,8.98520321405289,6.42247599981447,6.218735977642,13.109065177259,10.7064688756855,13.4523624480806,1.50791283939272,1.63171705145613,134.251646534197,44.1498794087572,1.12385412991454,0.586058432961016,2.13115428989678,1.51482556322624,1.89304931649754,0.780877488593277,5.38558494331997,4.06246956519338,1.78238939265915,1.41538265394416,2.02405350837447,2.63030272120181,1.18586333383957,1.92792789853084,6.67118400478862,0.890328018336276,1.79175655288934,7.25868541079156,176.551033992151,1.21390318077491,4.23252979750651,40.9273023070299,50.2013217897314,69.7877785832715,14.2135561242522,32.354501923498,28.8762876491624,143.48068810286,183.428378920498,136.138917087607,15.6602218646742,1.44048875225048,0.905510786479282,2.57204442037911,1.95074257006501,4.99432689285798,3.45552943264454,2.43571959291679,5.86679270159276,7.83778662196135,40.1361684460031,7.91454014119104,2.26050197374268,2.77439454669517,3.34242563208782,3.93938159388147,4.37221254944776,0.370850604021019,1.36696704638282,2.47664241555867,1.85194527369712,1.50694765603753,0.956859594047176,0.457556346413045,0.339956859987711,0.279902904647316,0.552799895217695,16.2294005062569,1.89801596148681,3.04979200690273,2.80813886136683,6.690825472463,7.64268973111622,7.8221320903196,4.87655388779482,8.89970202745701,0.518459893167171,215.604741641163,2.25477175473676,0.448549638131936,0.496375471371293,2.33341426012857,1.54991788173277,1.520605129417,2.11243029562357,2.99470085141085,1.15345278868282,2.89900944991207,2.88030006257865,0.316011120628178,0.810900861160657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| ||
|short_description=p3@Nucb2 | |short_description=p3@Nucb2 | ||
}} | }} |
Latest revision as of 18:48, 25 September 2015
Short description: | p3@Nucb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nucb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | 63bp_to_ENSMUST00000032895, NM_001130479, NM_016773, uc009jjj.2, uc009jjk.2_5end |
EntrezGene: | Nucb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pancreas | 8.40e-08 | 12 |
epithelial bud | 3.15e-07 | 17 |
thoracic cavity element | 5.76e-07 | 17 |
thoracic segment organ | 5.76e-07 | 17 |
thoracic cavity | 5.76e-07 | 17 |
thoracic segment of trunk | 5.76e-07 | 17 |
respiratory primordium | 5.76e-07 | 17 |
endoderm of foregut | 5.76e-07 | 17 |