Personal tools

FFCP PHASE1:Mm9::chr8:74659146..74659163,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=326618
|EntrezGene=326618
|HGNC=
|HGNC=
|MCL_coexpression_id=1896
|TSSclassifier=NA
|UniProt=Q6IRU2
|UniProt=Q6IRU2
|association_with_transcript=0bp_to_ENSMUST00000003575_5end
|association_with_transcript=0bp_to_ENSMUST00000003575_5end
|cluster_id=chr8:74659146..74659163,+
|description=CAGE_peak_3_at_Tpm4_5end
|description=CAGE_peak_3_at_Tpm4_5end
|id=chr8:74659146..74659163,+
|id=chr8:74659146..74659163,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!2.64e-10!17;UBERON:0005181!2.64e-10!17;UBERON:0002224!2.64e-10!17;UBERON:0000915!2.64e-10!17;UBERON:0008947!2.64e-10!17;UBERON:0003258!2.64e-10!17;UBERON:0002048!9.67e-09!14;UBERON:0000117!9.67e-09!14;UBERON:0000171!9.67e-09!14;UBERON:0000170!9.67e-09!14;UBERON:0005597!9.67e-09!14;UBERON:0000118!9.67e-09!14
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.64e-10,17;UBERON:0005181,2.64e-10,17;UBERON:0002224,2.64e-10,17;UBERON:0000915,2.64e-10,17;UBERON:0008947,2.64e-10,17;UBERON:0003258,2.64e-10,17;UBERON:0002048,9.67e-09,14;UBERON:0000117,9.67e-09,14;UBERON:0000171,9.67e-09,14;UBERON:0000170,9.67e-09,14;UBERON:0005597,9.67e-09,14;UBERON:0000118,9.67e-09,14
|phase1_expression=12.6517589212787,8.37540978334467,7.27998783023258,4.53696316960245,3.00537437967808,5.70789524500425,5.84031601488814,14.332688902015,16.8946466582,20.5976783163354,12.1564757440109,4.86610169871552,14.8944635040149,12.6759583507546,3.66420737997229,3.64455481301687,0,14.8267217718372,13.8485577941796,14.429248161133,6.97354979238772,4.46809280403984,3.91799683708403,4.63978026100879,5.73523202667925,6.31655160526522,4.73838195774982,4.95583835177545,2.09025761402011,3.78045194639896,4.6563407237614,0,0,0,3.46621943701529,4.3221007793208,3.67504841272264,13.811543814318,23.440060335714,9.94695113550217,17.6469446409304,20.4913645487534,15.0508209439658,13.7227531593379,14.5982780956101,28.6332933372223,3.9119567217402,12.8634842264463,24.8245386489953,21.970578595394,25.0575694709399,10.062679505548,13.0870432725034,5.80289713609076,9.74672017513146,46.3066984864705,40.4012150313647,27.8462929829819,4.24864567805155,0,6.97214543856797,27.7852516296688,12.450127145556,4.94944844504769,3.9554654502679,4.2628806896766,3.89480143673926,4.2264013585371,8.19147937236973,6.61529097825284,7.99234853135252,3.14216082844184,2.87129103237098,10.2892271340561,9.87208351487835,2.75765635983006,3.30347642998166,2.17068474744819,1.22885226604995,3.42904348098504,5.03182039813253,4.16730696445408,1.95428099300967,1.68828783009504,2.90316670775939,5.30331453852602,5.41012387036591,3.91438836233131,39.3018943399225,42.3956452199067,29.5661778475711,7.74381489283248,8.15965600449301,0.539703191637817,1.29955283489534,0.448026887097336,3.5111105032938,49.2543632250587,42.8646907594733,45.5808051118339,9.01397886570755,55.1803852881567,78.9896243090602,78.2173373468664,29.4427815775251,33.9502219736632,29.8259422558722,6.39429726426736,18.9024655062435,7.71899123137089,13.1848848342263,9.74289530598852,11.5307748628029,13.565037649736,13.0523464920632,13.4463252722753,18.7868175478124,9.39895819979426,12.3845477272982,26.2062296914803,14.575540218386,13.5765070877862,7.45567044872489,2.92780797011547,2.72280718857492,4.59822699375465,10.0644704584973,5.39912457894067,7.75128385145695,3.59497534571574,3.20250421973039,6.91098936620754,1.56441888173049,3.3243009452943,3.94797284663164,2.10913641988085,32.6904357959515,14.9288364732112,9.60346482047964,3.36706969418358,19.5180664444056,22.7603083389138,21.7875177064473,18.2352829581215,15.3082123090488,16.5266699167456,13.6804517857204,5.17406741478031,31.2573589752621,22.6927296201383,25.8648152521005,24.1115305670332,21.409638190371,21.2433821578522,23.2533814140976,18.7092210809384,4.91549231119264,2.83082697826187,1.70498099637356,20.9197030260857,21.1073453982987,17.6460820231795,19.176323582402,15.7411385397923,17.8949850949359,15.5797742982773,19.3156849007726,14.478902453529,21.3927804887525,17.8942535846214,12.8088719082452,11.2573990317506,17.564009223284,12.6154033634749,2.3131894342054,6.68879980465349,2.64335026387038,4.7601101999438,28.7939138222566,32.280897388601,21.5208660407896,18.7565677899709,15.3440850252961,17.3105319762429,9.01605216934572,9.55253937399263,13.069430857614,15.1206918751275,15.2071987952914,9.88701349519644,9.07779809473716,4.38110801159608,31.1055357563054,25.705915337189,24.7957018480777,23.6235540300565,21.9166310499417,23.4954996632567,22.7651533647326,12.3992524302866,14.1298855057237,9.25478729413504,3.26097889795864,8.00856507437251,8.84515478009414,7.19558759631532,6.49152388443209,6.51178331331525,5.34714288740982,6.04161888646702,5.67473293712624,4.94210543738547,14.3768206527355,15.2577788544086,9.98520553966594,4.79899868099512,5.56131981917928,5.30687873499704,29.1910040463235,32.5925228245234,32.7559602648472,30.0448801822083,27.6934492980432,30.4861388544105,29.9934987516377,29.8554481222432,44.1378403497335,47.3934435848378,44.1689709181239,24.0879072632135,33.5008864819837,27.9172683062317,7.53956419696361,8.70249094109935,6.88469982226651,9.3818493743609,3.05046120976805,4.45404409050372,37.2132326005053,11.3611917241968,17.6684602873104,17.5697434933487,20.0343759891503,13.1432838873904,15.81870585985,19.2492040936406,17.8116708736954,15.1973046113882,17.7879500075936,0.642642632843614,15.6134093729095,21.9020692510724,27.3650091714008,14.3524006986106,7.96470830039777,13.352934988524,11.1859716076958,11.6935149448657,10.335566250827,17.8312385807478,15.247269296925,13.8142817201452,16.3988794056972,10.1131762539461,8.4334886859999,4.12542172992747,6.80879211507576,20.887086907632,17.4634223106719,16.7182887324642,15.2512600932355,18.9070946658195,11.8475294833527,7.61162372786498,42.0062357434042,52.7461856450912,4.85162475720916,26.5466867235783,19.2142667768128,28.5280134910177,18.383340976483,18.5479216711919,8.16146342563582,3.70850604021019,9.22702756308404,28.8941615148511,19.26023084645,10.1718966782533,6.69801715833023,9.15112692826091,4.9293744698218,3.35883485576779,6.90999869022119,6.68269432610579,31.9499353516947,22.1618219168265,20.8450307786076,20.9088296014469,16.8139174084557,18.071822415566,16.4480376893418,12.5642852152334,7.12882353104861,4.97071450469541,1.69107881605257,20.7827999001131,20.6823113071372,25.2786544847262,24.2820468138134,16.2197880471147,19.7160160924867,22.5253585780034,9.75191903159111,2.17425708743405,2.30424005006292,5.05617793005085,14.5962155008918,10.681939545142,9.22437843142345,8.77230808770659,10.1327490938445,9.37524506255757,7.53216588590344,8.27924889574811,5.79171730577999,5.54544018252623,7.9915462206597,8.65906574762965,7.12949103307571,9.29594572822367,32.8539210993616,39.4740969081693,60.7742311237964,10.8186172658027,28.3400537931285,15.3847364384503,21.0081011497485,10.0314420807073,0.564751842617067,2.76195141904306,1.14579102687879,1.54667864109319,2.05524755931193,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,2.5888015587591,38.6088933013137,21.1483182902546,20.317299084742,18.2330037801221,23.89590053959,24.0834996069519,14.446037307105,14.4224540067226,17.9714757371417,18.9522908822848,17.2365923925363,19.2398868213798,21.3502637031332,20.6160990743679,22.3998328926892,20.4806287251722,23.4086338408608,24.1136525579631,21.0163809409686,21.6382412597564,13.3719008430312,14.198064492747,22.1745656651008,12.9358310802772,17.0337978551748,20.392120501894,24.6952763378243,15.5211129748327,22.1360705568755,20.2011217796786,22.4220184254689,23.8380847348864,14.7323175541088,18.5924209423159,18.5190346541896,15.2384452542147,21.5217079769776,15.4707158914775,10.3295699317175,17.8679049486808,19.9406338633562
|phase1_expression=12.6517589212787,8.37540978334467,7.27998783023258,4.53696316960245,3.00537437967808,5.70789524500425,5.84031601488814,14.332688902015,16.8946466582,20.5976783163354,12.1564757440109,4.86610169871552,14.8944635040149,12.6759583507546,3.66420737997229,3.64455481301687,0,14.8267217718372,13.8485577941796,14.429248161133,6.97354979238772,4.46809280403984,3.91799683708403,4.63978026100879,5.73523202667925,6.31655160526522,4.73838195774982,4.95583835177545,2.09025761402011,3.78045194639896,4.6563407237614,0,0,0,3.46621943701529,4.3221007793208,3.67504841272264,13.811543814318,23.440060335714,9.94695113550217,17.6469446409304,20.4913645487534,15.0508209439658,13.7227531593379,14.5982780956101,28.6332933372223,3.9119567217402,12.8634842264463,24.8245386489953,21.970578595394,25.0575694709399,10.062679505548,13.0870432725034,5.80289713609076,9.74672017513146,46.3066984864705,40.4012150313647,27.8462929829819,4.24864567805155,0,6.97214543856797,27.7852516296688,12.450127145556,4.94944844504769,3.9554654502679,4.2628806896766,3.89480143673926,4.2264013585371,8.19147937236973,6.61529097825284,7.99234853135252,3.14216082844184,2.87129103237098,10.2892271340561,9.87208351487835,2.75765635983006,3.30347642998166,2.17068474744819,1.22885226604995,3.42904348098504,5.03182039813253,4.16730696445408,1.95428099300967,1.68828783009504,2.90316670775939,5.30331453852602,5.41012387036591,3.91438836233131,39.3018943399225,42.3956452199067,29.5661778475711,7.74381489283248,8.15965600449301,0.539703191637817,1.29955283489534,0.448026887097336,3.5111105032938,49.2543632250587,42.8646907594733,45.5808051118339,9.01397886570755,55.1803852881567,78.9896243090602,78.2173373468664,29.4427815775251,33.9502219736632,29.8259422558722,6.39429726426736,18.9024655062435,7.71899123137089,13.1848848342263,9.74289530598852,11.5307748628029,13.565037649736,13.0523464920632,13.4463252722753,18.7868175478124,9.39895819979426,12.3845477272982,26.2062296914803,14.575540218386,13.5765070877862,7.45567044872489,2.92780797011547,2.72280718857492,4.59822699375465,10.0644704584973,5.39912457894067,7.75128385145695,3.59497534571574,3.20250421973039,6.91098936620754,1.56441888173049,3.3243009452943,3.94797284663164,2.10913641988085,32.6904357959515,14.9288364732112,9.60346482047964,3.36706969418358,19.5180664444056,22.7603083389138,21.7875177064473,18.2352829581215,15.3082123090488,16.5266699167456,13.6804517857204,5.17406741478031,31.2573589752621,22.6927296201383,25.8648152521005,24.1115305670332,21.409638190371,21.2433821578522,23.2533814140976,18.7092210809384,4.91549231119264,2.83082697826187,1.70498099637356,20.9197030260857,21.1073453982987,17.6460820231795,19.176323582402,15.7411385397923,17.8949850949359,15.5797742982773,19.3156849007726,14.478902453529,21.3927804887525,17.8942535846214,12.8088719082452,11.2573990317506,17.564009223284,12.6154033634749,2.3131894342054,6.68879980465349,2.64335026387038,4.7601101999438,28.7939138222566,32.280897388601,21.5208660407896,18.7565677899709,15.3440850252961,17.3105319762429,9.01605216934572,9.55253937399263,13.069430857614,15.1206918751275,15.2071987952914,9.88701349519644,9.07779809473716,4.38110801159608,31.1055357563054,25.705915337189,24.7957018480777,23.6235540300565,21.9166310499417,23.4954996632567,22.7651533647326,12.3992524302866,14.1298855057237,9.25478729413504,3.26097889795864,8.00856507437251,8.84515478009414,7.19558759631532,6.49152388443209,6.51178331331525,5.34714288740982,6.04161888646702,5.67473293712624,4.94210543738547,14.3768206527355,15.2577788544086,9.98520553966594,4.79899868099512,5.56131981917928,5.30687873499704,29.1910040463235,32.5925228245234,32.7559602648472,30.0448801822083,27.6934492980432,30.4861388544105,29.9934987516377,29.8554481222432,44.1378403497335,47.3934435848378,44.1689709181239,24.0879072632135,33.5008864819837,27.9172683062317,7.53956419696361,8.70249094109935,6.88469982226651,9.3818493743609,3.05046120976805,4.45404409050372,37.2132326005053,11.3611917241968,17.6684602873104,17.5697434933487,20.0343759891503,13.1432838873904,15.81870585985,19.2492040936406,17.8116708736954,15.1973046113882,17.7879500075936,0.642642632843614,15.6134093729095,21.9020692510724,27.3650091714008,14.3524006986106,7.96470830039777,13.352934988524,11.1859716076958,11.6935149448657,10.335566250827,17.8312385807478,15.247269296925,13.8142817201452,16.3988794056972,10.1131762539461,8.4334886859999,4.12542172992747,6.80879211507576,20.887086907632,17.4634223106719,16.7182887324642,15.2512600932355,18.9070946658195,11.8475294833527,7.61162372786498,42.0062357434042,52.7461856450912,4.85162475720916,26.5466867235783,19.2142667768128,28.5280134910177,18.383340976483,18.5479216711919,8.16146342563582,3.70850604021019,9.22702756308404,28.8941615148511,19.26023084645,10.1718966782533,6.69801715833023,9.15112692826091,4.9293744698218,3.35883485576779,6.90999869022119,6.68269432610579,31.9499353516947,22.1618219168265,20.8450307786076,20.9088296014469,16.8139174084557,18.071822415566,16.4480376893418,12.5642852152334,7.12882353104861,4.97071450469541,1.69107881605257,20.7827999001131,20.6823113071372,25.2786544847262,24.2820468138134,16.2197880471147,19.7160160924867,22.5253585780034,9.75191903159111,2.17425708743405,2.30424005006292,5.05617793005085,14.5962155008918,10.681939545142,9.22437843142345,8.77230808770659,10.1327490938445,9.37524506255757,7.53216588590344,8.27924889574811,5.79171730577999,5.54544018252623,7.9915462206597,8.65906574762965,7.12949103307571,9.29594572822367,32.8539210993616,39.4740969081693,60.7742311237964,10.8186172658027,28.3400537931285,15.3847364384503,21.0081011497485,10.0314420807073,0.564751842617067,2.76195141904306,1.14579102687879,1.54667864109319,2.05524755931193,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,2.5888015587591,38.6088933013137,21.1483182902546,20.317299084742,18.2330037801221,23.89590053959,24.0834996069519,14.446037307105,14.4224540067226,17.9714757371417,18.9522908822848,17.2365923925363,19.2398868213798,21.3502637031332,20.6160990743679,22.3998328926892,20.4806287251722,23.4086338408608,24.1136525579631,21.0163809409686,21.6382412597564,13.3719008430312,14.198064492747,22.1745656651008,12.9358310802772,17.0337978551748,20.392120501894,24.6952763378243,15.5211129748327,22.1360705568755,20.2011217796786,22.4220184254689,23.8380847348864,14.7323175541088,18.5924209423159,18.5190346541896,15.2384452542147,21.5217079769776,15.4707158914775,10.3295699317175,17.8679049486808,19.9406338633562
|short_description=p3@Tpm4
|short_description=p3@Tpm4
}}
}}

Latest revision as of 18:43, 25 September 2015

Short description:p3@Tpm4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tpm4_5end
Coexpression cluster:MCL_coexpression_mm9:1896
Association with transcript: 0bp_to_ENSMUST00000003575_5end
EntrezGene:Tpm4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Tpm4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G712.65
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E716.89
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.85
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B92.09
Ileum epithelium, pool2.CNhs13232.10253-104C13.78
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.47
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.95
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G917.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H220.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D813.72
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B328.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.86
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C425.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.09
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C146.31
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E140.40
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C527.85
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D112.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.87
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D939.30
Mouse Schwann, donor2.CNhs12573.11746-123F942.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I749.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E342.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I845.58
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.01
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H155.18
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I878.99
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B678.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G129.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G233.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.83
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C513.18
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F513.57
adrenal gland, neonate N00.CNhs11191.1311-23C113.05
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A818.79
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G212.38
bone (os femoris), neonate N02.CNhs11227.1985-43F526.21
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C313.58
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.06
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.75
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B22.11
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B132.69
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.93
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G43.37
eyeball, embryo E12.CNhs11016.345-16C619.52
eyeball, embryo E14.CNhs10521.399-16E222.76
eyeball, embryo E15.CNhs10593.426-16C921.79
eyeball, embryo E17.CNhs11023.1261-18D418.24
eyeball, neonate N00.CNhs11207.633-15C615.31
eyeball, neonate N01.CNhs11140.1532-43E716.53
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E231.26
forelimb, embryo E12.CNhs10600.359-14H222.69
forelimb, embryo E13.CNhs10589.384-1E225.86
forelimb, embryo E14.CNhs10577.413-26A824.11
forelimb, embryo E15.CNhs11007.437-20E721.41
forelimb, embryo E17.CNhs10598.1517-43C421.24
forelimb, embryo E18.CNhs11008.1520-43B523.25
gonad, embryo E13.CNhs11044.1564-45I618.71
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E920.92
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I917.65
heart, embryo E14.CNhs10597.403-26D419.18
heart, embryo E15.CNhs11017.431-16C815.74
heart, embryo E16.CNhs11021.457-17C617.89
heart, embryo E17.CNhs11025.479-18E515.58
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E314.48
heart, neonate N03.CNhs11221.1349-25I221.39
heart, neonate N10.CNhs11118.749-24G117.89
heart, neonate N16.CNhs11209.782-15G112.81
heart, neonate N20.CNhs11127.821-26I611.26
heart, neonate N25.CNhs11196.1351-25D317.56
heart, neonate N30.CNhs11202.1390-42D212.62
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G16.69
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D532.28
intestine, embryo E15.CNhs10602.976-16D821.52
intestine, embryo E16.CNhs10585.463-22H418.76
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B813.07
intestine, neonate N07.CNhs11095.720-20F215.12
intestine, neonate N10.CNhs11098.755-23A515.21
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I931.11
kidney, embryo E15.CNhs10997.434-16F825.71
kidney, embryo E16.CNhs10584.464-22A524.80
kidney, embryo E17.CNhs11028.483-18I223.62
kidney, embryo E18.CNhs11001.1288-20C721.92
kidney, neonate N00.CNhs11214.646-21G723.50
kidney, neonate N10.CNhs11206.758-6D522.77
kidney, neonate N20.CNhs11113.832-19I112.40
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E17.20
liver, embryo E15.CNhs10520.433-16D76.49
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.04
liver, neonate N00.CNhs11117.641-24F45.67
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H15.56
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B129.19
lung, embryo E12.CNhs10522.354-16G232.59
lung, embryo E14.CNhs10604.404-26F832.76
lung, embryo E15.CNhs11020.432-17C530.04
lung, embryo E16.CNhs10998.458-17B627.69
lung, embryo E17.CNhs10605.480-44A630.49
lung, embryo E18.CNhs10583.1287-20I629.99
lung, neonate N00.CNhs11224.640-42C629.86
lung, neonate N06.CNhs11212.683-20E544.14
lung, neonate N07.CNhs11111.715-19A347.39
lung, neonate N10.CNhs11219.750-23E644.17
lung, neonate N20.CNhs11109.822-18A424.09
lung, neonate N25.CNhs11119.1359-25C733.50
lung, neonate N30.CNhs11133.1394-42H227.92
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C737.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.36
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D713.14
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I715.61
ovary, embryo E18.CNhs11040.505-44H721.90
ovary, neonate N00.CNhs11217.1299-22I427.37
oviduct, adult pregnant day01.CNhs10500.988-6G614.35
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F413.35
pancreas, embryo E15.CNhs11042.1556-45F211.19
pancreas, embryo E16.CNhs11003.460-26E511.69
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E620.89
pituitary gland, embryo E13.CNhs11009.370-44C717.46
pituitary gland, embryo E14.CNhs11037.398-44A516.72
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F618.91
pituitary gland, embryo E17.CNhs11039.1265-44F511.85
pituitary gland, neonate N00.CNhs11190.1308-22E97.61
placenta, adult pregnant day10.CNhs10472.539-13I742.01
placenta, adult pregnant day17.CNhs10464.577-18G352.75
prostate, adult.CNhs10470.859-1F84.85
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G419.21
skin, neonate N03.CNhs11215.662-22H328.53
skin, neonate N06.CNhs11097.693-20I518.38
skin, neonate N10.CNhs11108.762-6C418.55
small intestine, neonate N16.CNhs11114.790-21I18.16
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G29.23
spleen, embryo E16.CNhs11035.461-43C128.89
spleen, embryo E18.CNhs11011.1271-21F219.26
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H16.70
spleen, neonate N25.CNhs11099.1354-25G39.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E331.95
stomach, embryo E15.CNhs10603.1252-16G822.16
stomach, embryo E16.CNhs11022.459-17D420.85
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C616.81
stomach, neonate N03.CNhs11193.1340-24B818.07
stomach, neonate N07.CNhs11210.718-18A916.45
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I17.13
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F520.78
testis, embryo E15.CNhs11034.443-27C520.68
testis, embryo E16.CNhs11033.470-26G525.28
testis, embryo E17.CNhs11029.486-18I524.28
testis, embryo E18.CNhs11027.503-18G516.22
testis, neonate N00.CNhs11189.1300-22B719.72
testis, neonate N07.CNhs11222.726-26I422.53
testis, neonate N10.CNhs11204.763-44D99.75
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I414.60
thymus, embryo E15.CNhs11005.430-45I210.68
thymus, embryo E16.CNhs11002.456-26C59.22
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F89.38
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C48.28
thymus, neonate N07.CNhs11211.713-19D35.79
thymus, neonate N10.CNhs11194.748-24E45.55
thymus, neonate N20.CNhs11186.820-7A27.99
thymus, neonate N25.CNhs11125.1362-25G78.66
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H332.85
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F739.47
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G560.77
urinary bladder, adult.CNhs10481.879-12E410.82
uterus, adult pregnant day19.CNhs10497.590-15F528.34
uterus, adult.CNhs10509.92-27E515.38
vagina, adult.CNhs10502.89-27D521.01
vesicular gland, adult.CNhs10491.51-27F810.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I838.61
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H220.32
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B123.90
whole body, embryo E16.CNhs10514.453-14F224.08
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G517.97
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.24
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G521.35
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G522.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.11
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G521.64
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.20
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.94
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G517.03
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G524.70
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G522.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G523.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G518.59
whole body, embryo E17.5.CNhs10513.490-9F918.52
whole body, embryo E17.CNhs10517.475-3I515.24
whole body, embryo E18.CNhs10516.493-3B321.52
whole body, neonate N00.CNhs10525.657-19C215.47
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D117.87
whole body, neonate N10.CNhs10518.761-6B419.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element2.64e-1017
thoracic segment organ2.64e-1017
thoracic cavity2.64e-1017
thoracic segment of trunk2.64e-1017
respiratory primordium2.64e-1017
endoderm of foregut2.64e-1017
lung9.67e-0914
respiratory tube9.67e-0914
respiration organ9.67e-0914
pair of lungs9.67e-0914
lung primordium9.67e-0914
lung bud9.67e-0914
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:74659146..74659163,%2B&oldid=4207696"