FFCP PHASE1:Mm9::chr8:74659146..74659163,+: Difference between revisions
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{{FFCP|EntrezGene=326618|HGNC=|MCL_coexpression_id=1896|UniProt=Q6IRU2|association_with_transcript=0bp_to_ENSMUST00000003575_5end|description=CAGE_peak_3_at_Tpm4_5end|id=chr8:74659146..74659163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.64e-10!17;UBERON:0005181!2.64e-10!17;UBERON:0002224!2.64e-10!17;UBERON:0000915!2.64e-10!17;UBERON:0008947!2.64e-10!17;UBERON:0003258!2.64e-10!17;UBERON:0002048!9.67e-09!14;UBERON:0000117!9.67e-09!14;UBERON:0000171!9.67e-09!14;UBERON:0000170!9.67e-09!14;UBERON:0005597!9.67e-09!14;UBERON:0000118!9.67e-09!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.64e-10,17;UBERON:0005181,2.64e-10,17;UBERON:0002224,2.64e-10,17;UBERON:0000915,2.64e-10,17;UBERON:0008947,2.64e-10,17;UBERON:0003258,2.64e-10,17;UBERON:0002048,9.67e-09,14;UBERON:0000117,9.67e-09,14;UBERON:0000171,9.67e-09,14;UBERON:0000170,9.67e-09,14;UBERON:0005597,9.67e-09,14;UBERON:0000118,9.67e-09,14|phase1_expression=12.6517589212787,8.37540978334467,7.27998783023258,4.53696316960245,3.00537437967808,5.70789524500425,5.84031601488814,14.332688902015,16.8946466582,20.5976783163354,12.1564757440109,4.86610169871552,14.8944635040149,12.6759583507546,3.66420737997229,3.64455481301687,0,14.8267217718372,13.8485577941796,14.429248161133,6.97354979238772,4.46809280403984,3.91799683708403,4.63978026100879,5.73523202667925,6.31655160526522,4.73838195774982,4.95583835177545,2.09025761402011,3.78045194639896,4.6563407237614,0,0,0,3.46621943701529,4.3221007793208,3.67504841272264,13.811543814318,23.440060335714,9.94695113550217,17.6469446409304,20.4913645487534,15.0508209439658,13.7227531593379,14.5982780956101,28.6332933372223,3.9119567217402,12.8634842264463,24.8245386489953,21.970578595394,25.0575694709399,10.062679505548,13.0870432725034,5.80289713609076,9.74672017513146,46.3066984864705,40.4012150313647,27.8462929829819,4.24864567805155,0,6.97214543856797,27.7852516296688,12.450127145556,4.94944844504769,3.9554654502679,4.2628806896766,3.89480143673926,4.2264013585371,8.19147937236973,6.61529097825284,7.99234853135252,3.14216082844184,2.87129103237098,10.2892271340561,9.87208351487835,2.75765635983006,3.30347642998166,2.17068474744819,1.22885226604995,3.42904348098504,5.03182039813253,4.16730696445408,1.95428099300967,1.68828783009504,2.90316670775939,5.30331453852602,5.41012387036591,3.91438836233131,39.3018943399225,42.3956452199067,29.5661778475711,7.74381489283248,8.15965600449301,0.539703191637817,1.29955283489534,0.448026887097336,3.5111105032938,49.2543632250587,42.8646907594733,45.5808051118339,9.01397886570755,55.1803852881567,78.9896243090602,78.2173373468664,29.4427815775251,33.9502219736632,29.8259422558722,6.39429726426736,18.9024655062435,7.71899123137089,13.1848848342263,9.74289530598852,11.5307748628029,13.565037649736,13.0523464920632,13.4463252722753,18.7868175478124,9.39895819979426,12.3845477272982,26.2062296914803,14.575540218386,13.5765070877862,7.45567044872489,2.92780797011547,2.72280718857492,4.59822699375465,10.0644704584973,5.39912457894067,7.75128385145695,3.59497534571574,3.20250421973039,6.91098936620754,1.56441888173049,3.3243009452943,3.94797284663164,2.10913641988085,32.6904357959515,14.9288364732112,9.60346482047964,3.36706969418358,19.5180664444056,22.7603083389138,21.7875177064473,18.2352829581215,15.3082123090488,16.5266699167456,13.6804517857204,5.17406741478031,31.2573589752621,22.6927296201383,25.8648152521005,24.1115305670332,21.409638190371,21.2433821578522,23.2533814140976,18.7092210809384,4.91549231119264,2.83082697826187,1.70498099637356,20.9197030260857,21.1073453982987,17.6460820231795,19.176323582402,15.7411385397923,17.8949850949359,15.5797742982773,19.3156849007726,14.478902453529,21.3927804887525,17.8942535846214,12.8088719082452,11.2573990317506,17.564009223284,12.6154033634749,2.3131894342054,6.68879980465349,2.64335026387038,4.7601101999438,28.7939138222566,32.280897388601,21.5208660407896,18.7565677899709,15.3440850252961,17.3105319762429,9.01605216934572,9.55253937399263,13.069430857614,15.1206918751275,15.2071987952914,9.88701349519644,9.07779809473716,4.38110801159608,31.1055357563054,25.705915337189,24.7957018480777,23.6235540300565,21.9166310499417,23.4954996632567,22.7651533647326,12.3992524302866,14.1298855057237,9.25478729413504,3.26097889795864,8.00856507437251,8.84515478009414,7.19558759631532,6.49152388443209,6.51178331331525,5.34714288740982,6.04161888646702,5.67473293712624,4.94210543738547,14.3768206527355,15.2577788544086,9.98520553966594,4.79899868099512,5.56131981917928,5.30687873499704,29.1910040463235,32.5925228245234,32.7559602648472,30.0448801822083,27.6934492980432,30.4861388544105,29.9934987516377,29.8554481222432,44.1378403497335,47.3934435848378,44.1689709181239,24.0879072632135,33.5008864819837,27.9172683062317,7.53956419696361,8.70249094109935,6.88469982226651,9.3818493743609,3.05046120976805,4.45404409050372,37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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=326618 | |||
|HGNC= | |||
|MCL_coexpression_id=1896 | |||
|TSSclassifier=NA | |||
|UniProt=Q6IRU2 | |||
|association_with_transcript=0bp_to_ENSMUST00000003575_5end | |||
|cluster_id=chr8:74659146..74659163,+ | |||
|description=CAGE_peak_3_at_Tpm4_5end | |||
|id=chr8:74659146..74659163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.64e-10!17;UBERON:0005181!2.64e-10!17;UBERON:0002224!2.64e-10!17;UBERON:0000915!2.64e-10!17;UBERON:0008947!2.64e-10!17;UBERON:0003258!2.64e-10!17;UBERON:0002048!9.67e-09!14;UBERON:0000117!9.67e-09!14;UBERON:0000171!9.67e-09!14;UBERON:0000170!9.67e-09!14;UBERON:0005597!9.67e-09!14;UBERON:0000118!9.67e-09!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.64e-10,17;UBERON:0005181,2.64e-10,17;UBERON:0002224,2.64e-10,17;UBERON:0000915,2.64e-10,17;UBERON:0008947,2.64e-10,17;UBERON:0003258,2.64e-10,17;UBERON:0002048,9.67e-09,14;UBERON:0000117,9.67e-09,14;UBERON:0000171,9.67e-09,14;UBERON:0000170,9.67e-09,14;UBERON:0005597,9.67e-09,14;UBERON:0000118,9.67e-09,14 | |||
|phase1_expression=12.6517589212787,8.37540978334467,7.27998783023258,4.53696316960245,3.00537437967808,5.70789524500425,5.84031601488814,14.332688902015,16.8946466582,20.5976783163354,12.1564757440109,4.86610169871552,14.8944635040149,12.6759583507546,3.66420737997229,3.64455481301687,0,14.8267217718372,13.8485577941796,14.429248161133,6.97354979238772,4.46809280403984,3.91799683708403,4.63978026100879,5.73523202667925,6.31655160526522,4.73838195774982,4.95583835177545,2.09025761402011,3.78045194639896,4.6563407237614,0,0,0,3.46621943701529,4.3221007793208,3.67504841272264,13.811543814318,23.440060335714,9.94695113550217,17.6469446409304,20.4913645487534,15.0508209439658,13.7227531593379,14.5982780956101,28.6332933372223,3.9119567217402,12.8634842264463,24.8245386489953,21.970578595394,25.0575694709399,10.062679505548,13.0870432725034,5.80289713609076,9.74672017513146,46.3066984864705,40.4012150313647,27.8462929829819,4.24864567805155,0,6.97214543856797,27.7852516296688,12.450127145556,4.94944844504769,3.9554654502679,4.2628806896766,3.89480143673926,4.2264013585371,8.19147937236973,6.61529097825284,7.99234853135252,3.14216082844184,2.87129103237098,10.2892271340561,9.87208351487835,2.75765635983006,3.30347642998166,2.17068474744819,1.22885226604995,3.42904348098504,5.03182039813253,4.16730696445408,1.95428099300967,1.68828783009504,2.90316670775939,5.30331453852602,5.41012387036591,3.91438836233131,39.3018943399225,42.3956452199067,29.5661778475711,7.74381489283248,8.15965600449301,0.539703191637817,1.29955283489534,0.448026887097336,3.5111105032938,49.2543632250587,42.8646907594733,45.5808051118339,9.01397886570755,55.1803852881567,78.9896243090602,78.2173373468664,29.4427815775251,33.9502219736632,29.8259422558722,6.39429726426736,18.9024655062435,7.71899123137089,13.1848848342263,9.74289530598852,11.5307748628029,13.565037649736,13.0523464920632,13.4463252722753,18.7868175478124,9.39895819979426,12.3845477272982,26.2062296914803,14.575540218386,13.5765070877862,7.45567044872489,2.92780797011547,2.72280718857492,4.59822699375465,10.0644704584973,5.39912457894067,7.75128385145695,3.59497534571574,3.20250421973039,6.91098936620754,1.56441888173049,3.3243009452943,3.94797284663164,2.10913641988085,32.6904357959515,14.9288364732112,9.60346482047964,3.36706969418358,19.5180664444056,22.7603083389138,21.7875177064473,18.2352829581215,15.3082123090488,16.5266699167456,13.6804517857204,5.17406741478031,31.2573589752621,22.6927296201383,25.8648152521005,24.1115305670332,21.409638190371,21.2433821578522,23.2533814140976,18.7092210809384,4.91549231119264,2.83082697826187,1.70498099637356,20.9197030260857,21.1073453982987,17.6460820231795,19.176323582402,15.7411385397923,17.8949850949359,15.5797742982773,19.3156849007726,14.478902453529,21.3927804887525,17.8942535846214,12.8088719082452,11.2573990317506,17.564009223284,12.6154033634749,2.3131894342054,6.68879980465349,2.64335026387038,4.7601101999438,28.7939138222566,32.280897388601,21.5208660407896,18.7565677899709,15.3440850252961,17.3105319762429,9.01605216934572,9.55253937399263,13.069430857614,15.1206918751275,15.2071987952914,9.88701349519644,9.07779809473716,4.38110801159608,31.1055357563054,25.705915337189,24.7957018480777,23.6235540300565,21.9166310499417,23.4954996632567,22.7651533647326,12.3992524302866,14.1298855057237,9.25478729413504,3.26097889795864,8.00856507437251,8.84515478009414,7.19558759631532,6.49152388443209,6.51178331331525,5.34714288740982,6.04161888646702,5.67473293712624,4.94210543738547,14.3768206527355,15.2577788544086,9.98520553966594,4.79899868099512,5.56131981917928,5.30687873499704,29.1910040463235,32.5925228245234,32.7559602648472,30.0448801822083,27.6934492980432,30.4861388544105,29.9934987516377,29.8554481222432,44.1378403497335,47.3934435848378,44.1689709181239,24.0879072632135,33.5008864819837,27.9172683062317,7.53956419696361,8.70249094109935,6.88469982226651,9.3818493743609,3.05046120976805,4.45404409050372,37.2132326005053,11.3611917241968,17.6684602873104,17.5697434933487,20.0343759891503,13.1432838873904,15.81870585985,19.2492040936406,17.8116708736954,15.1973046113882,17.7879500075936,0.642642632843614,15.6134093729095,21.9020692510724,27.3650091714008,14.3524006986106,7.96470830039777,13.352934988524,11.1859716076958,11.6935149448657,10.335566250827,17.8312385807478,15.247269296925,13.8142817201452,16.3988794056972,10.1131762539461,8.4334886859999,4.12542172992747,6.80879211507576,20.887086907632,17.4634223106719,16.7182887324642,15.2512600932355,18.9070946658195,11.8475294833527,7.61162372786498,42.0062357434042,52.7461856450912,4.85162475720916,26.5466867235783,19.2142667768128,28.5280134910177,18.383340976483,18.5479216711919,8.16146342563582,3.70850604021019,9.22702756308404,28.8941615148511,19.26023084645,10.1718966782533,6.69801715833023,9.15112692826091,4.9293744698218,3.35883485576779,6.90999869022119,6.68269432610579,31.9499353516947,22.1618219168265,20.8450307786076,20.9088296014469,16.8139174084557,18.07182241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| |||
|short_description=p3@Tpm4 | |||
}} |
Latest revision as of 18:43, 25 September 2015
Short description: | p3@Tpm4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tpm4_5end |
Coexpression cluster: | MCL_coexpression_mm9:1896 |
Association with transcript: | 0bp_to_ENSMUST00000003575_5end |
EntrezGene: | Tpm4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.64e-10 | 17 |
thoracic segment organ | 2.64e-10 | 17 |
thoracic cavity | 2.64e-10 | 17 |
thoracic segment of trunk | 2.64e-10 | 17 |
respiratory primordium | 2.64e-10 | 17 |
endoderm of foregut | 2.64e-10 | 17 |
lung | 9.67e-09 | 14 |
respiratory tube | 9.67e-09 | 14 |
respiration organ | 9.67e-09 | 14 |
pair of lungs | 9.67e-09 | 14 |
lung primordium | 9.67e-09 | 14 |
lung bud | 9.67e-09 | 14 |