FFCP PHASE1:Mm9::chr7:123174485..123174514,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:123174485..123174514,- to FFCP PHASE1:Mm9::chr7:123174485..123174514,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20679 | |EntrezGene=20679 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BSS6 | |UniProt=Q8BSS6 | ||
|association_with_transcript=46bp_to_ENSMUST00000106612,NM_001025560,uc009jir.1_5end | |||
|cluster_id=chr7:123174485..123174514,- | |||
|description=CAGE_peak_6_at_Sox6_5end | |||
|id=chr7:123174485..123174514,- | |||
|ontology_enrichment_celltype=CL:0000221!5.06e-07!44;CL:0000133!5.06e-07!44;CL:0002319!5.38e-07!43 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.62e-08!18;UBERON:0000948!5.62e-08!18;UBERON:0005498!5.62e-08!18;UBERON:0004140!5.62e-08!18;UBERON:0009881!5.62e-08!18;UBERON:0004141!5.62e-08!18;UBERON:0003084!5.62e-08!18;UBERON:0007005!5.62e-08!18;UBERON:0004139!5.62e-08!18;UBERON:0004291!5.62e-08!18;UBERON:0001017!1.46e-07!73;UBERON:0005743!1.46e-07!73;UBERON:0003103!2.05e-07!43;UBERON:0000073!2.60e-07!75;UBERON:0001016!2.60e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.34e-16,18;UBERON:0000948,2.34e-16,18;UBERON:0005498,2.34e-16,18;UBERON:0004140,2.34e-16,18;UBERON:0009881,2.34e-16,18;UBERON:0004141,2.34e-16,18;UBERON:0003084,2.34e-16,18;UBERON:0007005,2.34e-16,18;UBERON:0004139,2.34e-16,18;UBERON:0004291,2.34e-16,18;UBERON:0004535,9.38e-12,23;UBERON:0001009,9.38e-12,23;UBERON:0003103,2.98e-07,43;UBERON:0004872,7.54e-07,33 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,5.16312946244604,6.79119451761232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.18025156380447,1.97717564461025,1.74986909166855,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,2.09720077362883,3.07374644257244,5.28817022773236,3.91517221161903,4.20649922702764,0.571301968807607,0.220868540951614,2.08234358665422,2.97120960156533,0,1.10115880999389,0.383062014255563,0.307213066512487,0.659431438650969,1.18933936683133,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.854230084794618,0.372798891650601,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,0,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.86759614151947,0.884610551949874,1.29413479957927,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,0.376963056338593,1.56441888173049,0.511430914660661,0.62336413367868,0.973447578406546,0.611036183101898,0.746441823660558,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,0.720248519221397,0.90422890701429,0.476255494059295,0.512454881139399,0.562210347358373,1.03481348295606,0.646703978798527,1.51284864134255,1.05570674498369,0.219195732427575,0.834141747676794,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0,2.48550927042602,1.87620847984877,2.34080679899319,4.02466050494857,3.93528463494808,3.5481435964097,3.48800917125612,4.29237442239391,3.38619492864792,4.11399624783701,3.94001913789829,3.64809642956351,4.82459958503597,4.61055242111206,3.35516046900929,0.841159794256509,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0,0.280543279561274,0.948548056863859,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.739012760666419,0.947457058852424,1.62964976442026,1.18821560042632,1.40814148973101,1.34005005953453,0,0.780534591431195,0.630540576424764,0,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.586058432961016,0,4.79694761688309,0,0.780877488593277,0.215423397732799,1.67278158566786,3.34198011123591,3.11384183867716,2.02405350837447,0.876767573733936,2.37172666767914,0.642642632843614,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.900305470156551,0.388076051348264,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0.8244312647074,0.968786560175433,0.542816324353403,0,0,0.291480836629851,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.909188012978695,0.26175594198403,0,0,0,0.598066184175915,0.66183396182839,0.194451188344048,0.258319646955462,0,0.234714477291508,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,1.37016503954128,2.2661816921691,0.675022500231806,0,0,0.51776031175182,0.830298780673413,0.798049746802062,0.341467211508268,1.21553358534147,0.209613162627982,0.367687016900028,0.888986911206461,1.23621034343337,1.28367683836726,1.51618327058278,1.77435509923168,1.32038438970253,0.842773567228942,0.832326981263301,0.976402972245426,0.952587382566147,1.73826488917283,0.192909220463705,2.06042950401653,1.32479028120958,1.37147700954166,0.887379030796687,0.953744759789284,0.872078499793971,1.69396884747595,1.09998990259179,1.28049581010941,2.36762740294059,1.62964936615034,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,1.70430525304563,1.15743966588685,1.24905288968973,1.16965804222704,0.429742108096597,0.765153328275374,1.76473135295612,0.927471342481686 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,5.16312946244604,6.79119451761232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,2.18025156380447,1.97717564461025,1.74986909166855,0.839918529752175,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,2.09720077362883,3.07374644257244,5.28817022773236,3.91517221161903,4.20649922702764,0.571301968807607,0.220868540951614,2.08234358665422,2.97120960156533,0,1.10115880999389,0.383062014255563,0.307213066512487,0.659431438650969,1.18933936683133,0.52091337055676,0,0,0.916789486660861,0.294628585473668,0.854230084794618,0.372798891650601,0.075726193333184,0.151143120213571,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,1.08245520505607,1.52015919285059,0.505524445014783,0,0,0.29688427812965,0,0,0.230615497256059,0,0.117588707135705,0,0.247194967734374,0.86759614151947,0.884610551949874,1.29413479957927,0.883366073841574,0.484875253135222,0,0,0,0,0,0,0,0,0.915001205637253,0.376963056338593,1.56441888173049,0.511430914660661,0.62336413367868,0.973447578406546,0.611036183101898,0.746441823660558,0.252722758433675,0.420883711772948,0.650602214813519,0.689706313300419,0.720248519221397,0.90422890701429,0.476255494059295,0.512454881139399,0.562210347358373,1.03481348295606,0.646703978798527,1.51284864134255,1.05570674498369,0.219195732427575,0.834141747676794,1.0447564995665,0.411564272815887,0.59710280045548,0,0,0,2.48550927042602,1.87620847984877,2.34080679899319,4.02466050494857,3.93528463494808,3.5481435964097,3.48800917125612,4.29237442239391,3.38619492864792,4.11399624783701,3.94001913789829,3.64809642956351,4.82459958503597,4.61055242111206,3.35516046900929,0.841159794256509,0.720332286654991,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0.379335801906163,0.228497025219458,1.1270773567308,0.610953983535943,0,0.280543279561274,0.948548056863859,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0.358794827043824,0,0.739012760666419,0.947457058852424,1.62964976442026,1.18821560042632,1.40814148973101,1.34005005953453,0,0.780534591431195,0.630540576424764,0,0.318909537314974,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,0.963303539926752,0.586058432961016,0,4.79694761688309,0,0.780877488593277,0.215423397732799,1.67278158566786,3.34198011123591,3.11384183867716,2.02405350837447,0.876767573733936,2.37172666767914,0.642642632843614,0,0.178065603667255,0.325773918707152,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,1.09060118843252,0.712994756769443,0.948110273807448,0,0,0.680879211507576,0.900305470156551,0.388076051348264,0,0.354680467284547,0.178368817602071,0.329098041204242,0,0,0,0,0.8244312647074,0.968786560175433,0.542816324353403,0,0,0.291480836629851,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.436725127492355,0.404593039154462,0.909188012978695,0.26175594198403,0,0,0,0.598066184175915,0.66183396182839,0.194451188344048,0.258319646955462,0,0.234714477291508,0.39061315453185,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,0,0,0.36630324853453,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,1.37016503954128,2.2661816921691,0.675022500231806,0,0,0.51776031175182,0.830298780673413,0.798049746802062,0.341467211508268,1.21553358534147,0.209613162627982,0.367687016900028,0.888986911206461,1.23621034343337,1.28367683836726,1.51618327058278,1.77435509923168,1.32038438970253,0.842773567228942,0.832326981263301,0.976402972245426,0.952587382566147,1.73826488917283,0.192909220463705,2.06042950401653,1.32479028120958,1.37147700954166,0.887379030796687,0.953744759789284,0.872078499793971,1.69396884747595,1.09998990259179,1.28049581010941,2.36762740294059,1.62964936615034,1.12228454331548,0.474540072496697,0.689531376628944,0.409231043169689,1.70430525304563,1.15743966588685,1.24905288968973,1.16965804222704,0.429742108096597,0.765153328275374,1.76473135295612,0.927471342481686 | ||
|short_description=p6@Sox6 | |||
}} | }} |
Latest revision as of 18:38, 25 September 2015
Short description: | p6@Sox6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Sox6_5end |
Coexpression cluster: | NA |
Association with transcript: | 46bp_to_ENSMUST00000106612, NM_001025560, uc009jir.1_5end |
EntrezGene: | Sox6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.34e-16 | 18 |
heart | 2.34e-16 | 18 |
primitive heart tube | 2.34e-16 | 18 |
primary heart field | 2.34e-16 | 18 |
anterior lateral plate mesoderm | 2.34e-16 | 18 |
heart tube | 2.34e-16 | 18 |
heart primordium | 2.34e-16 | 18 |
cardiac mesoderm | 2.34e-16 | 18 |
cardiogenic plate | 2.34e-16 | 18 |
heart rudiment | 2.34e-16 | 18 |
cardiovascular system | 9.38e-12 | 23 |
circulatory system | 9.38e-12 | 23 |
compound organ | 2.98e-07 | 43 |
splanchnic layer of lateral plate mesoderm | 7.54e-07 | 33 |