Personal tools

FFCP PHASE1:Mm9::chr16:74411812..74411873,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268902
|EntrezGene=268902
|HGNC=
|HGNC=
|MCL_coexpression_id=1700
|MCL_coexpression_id=1700
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-130bp_to_ENSMUST00000140062_5end
|association_with_transcript=-130bp_to_ENSMUST00000140062_5end
|cluster_id=chr16:74411812..74411873,-
|description=CAGE_peak_1_at_Robo2_5end
|description=CAGE_peak_1_at_Robo2_5end
|id=chr16:74411812..74411873,-
|id=chr16:74411812..74411873,-
|ontology_enrichment_celltype=CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0000117!1.03e-08!23;CL:0000337!1.03e-08!23;CL:0000221!7.29e-07!44;CL:0000133!7.29e-07!44;CL:0002319!9.61e-07!43
|ontology_enrichment_celltype=CL:0000540!1.97e-09!33;CL:0000047!1.97e-09!33;CL:0000031!1.97e-09!33;CL:0000404!1.97e-09!33;CL:0000117!1.03e-08!23;CL:0000337!1.03e-08!23;CL:0000221!7.29e-07!44;CL:0000133!7.29e-07!44;CL:0002319!9.61e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000540,1.05e-09,33;CL:0000047,1.05e-09,33;CL:0000031,1.05e-09,33;CL:0000404,1.05e-09,33;CL:0000117,5.83e-09,23;CL:0000337,5.83e-09,23;CL:0000221,5.30e-07,44;CL:0000133,5.30e-07,44;CL:0002319,7.05e-07,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.23e-12!333;UBERON:0004121!7.81e-11!102;UBERON:0000924!7.81e-11!102;UBERON:0006601!7.81e-11!102;UBERON:0000922!2.58e-10!328;UBERON:0003056!1.88e-09!49;UBERON:0002346!3.67e-09!71;UBERON:0003075!3.67e-09!71;UBERON:0007284!3.67e-09!71;UBERON:0001017!4.30e-09!73;UBERON:0005743!4.30e-09!73;UBERON:0000073!7.41e-09!75;UBERON:0001016!7.41e-09!75;UBERON:0000033!3.38e-08!63;UBERON:0000479!3.40e-07!349;UBERON:0001049!8.69e-07!52;UBERON:0005068!8.69e-07!52;UBERON:0006241!8.69e-07!52;UBERON:0007135!8.69e-07!52
|ontology_enrichment_uberon=UBERON:0000468!2.23e-12!333;UBERON:0004121!7.81e-11!102;UBERON:0000924!7.81e-11!102;UBERON:0006601!7.81e-11!102;UBERON:0000922!2.58e-10!328;UBERON:0003056!1.88e-09!49;UBERON:0002346!3.67e-09!71;UBERON:0003075!3.67e-09!71;UBERON:0007284!3.67e-09!71;UBERON:0001017!4.30e-09!73;UBERON:0005743!4.30e-09!73;UBERON:0000073!7.41e-09!75;UBERON:0001016!7.41e-09!75;UBERON:0000033!3.38e-08!63;UBERON:0000479!3.40e-07!349;UBERON:0001049!8.69e-07!52;UBERON:0005068!8.69e-07!52;UBERON:0006241!8.69e-07!52;UBERON:0007135!8.69e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.75e-11,95;UBERON:0000924,4.75e-11,95;UBERON:0006601,4.75e-11,95;UBERON:0010371,3.63e-10,73;UBERON:0002346,3.66e-10,64;UBERON:0003075,3.66e-10,64;UBERON:0007284,3.66e-10,64;UBERON:0003056,1.00e-09,49;UBERON:0001017,3.07e-09,73;UBERON:0001016,7.06e-09,75;UBERON:0000922,9.80e-08,320;UBERON:0001049,7.37e-07,52;UBERON:0005068,7.37e-07,52;UBERON:0006241,7.37e-07,52;UBERON:0007135,7.37e-07,52;UBERON:0000073,9.93e-07,54
|phase1_expression=11.8510146857548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.89147186513637,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.09843091367236,3.11087838518853,1.67983705950435,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,23.8733423814325,22.2176211294254,26.6209189472595,0.338844532069132,0,0.449949858640699,0,0,1.79760066311043,1.15265491596466,28.2035745479059,20.520902626417,28.1835448210852,5.42736870367227,8.1721360152097,22.6607978547665,22.2361492762308,20.2228133054205,3.30347642998166,3.19218345212969,4.14737639791857,20.1786020227197,16.8337264228434,22.3992749339407,1.67509799400829,3.93933827022176,3.81995619442025,19.1508580557884,21.6404954814636,31.6879057903011,0.454357159999104,5.36558076758177,0,0,0,0,0,0.448026887097336,1.26399978118577,0,0,0,6.33795388995062,0,0,0,0.216491041011214,0,0,0.22836775943812,2.58937883647172,1.1875371125186,5.03107447621794,1.82679286987285,3.92046345335299,1.3565037649736,3.76283862834255,0.628332956648377,1.23597483867187,0.144599356919912,0,2.91180329905337,2.42925670306433,3.87900202508178,0,0.878342391034642,1.04723353406728,0.766371165625774,0,0,0,4.04434726393021,3.66000482254901,24.3769443098957,6.08385120672968,2.55715457330331,3.32460871295296,4.38051410282946,7.23059483337246,1.11966273549084,0.758168275301024,2.10441855886474,8.84819012146385,14.4838325793088,19.086585759367,30.4423732028144,25.309577684294,41.6369590925762,37.1995846502123,8.2785078636485,20.0478233427543,28.7441241855085,18.8267702855425,8.54863356467542,23.0779216857246,15.3230953269753,18.314610140307,11.3449532086541,0,0,0,5.59239585845855,9.38104239924385,4.14142741360334,4.02466050494857,2.36117078096885,2.46827380619805,3.0229412817553,0.536546802799238,1.40118410840603,1.15191894939436,1.14917224855367,0.648550476366846,0.146199987425332,0.219550115291051,0.402619256281115,2.52347938276953,5.04232600658494,0,0.528901133327089,9.17139477301506,13.7019636397659,7.98978260196979,7.86565746031036,4.22518283305254,5.89699440948933,0.474529061544512,3.45867804920423,4.27269854960458,3.97912944082302,2.53453313254856,0.898819408654221,1.51296634912286,1.1948476395262,11.0007382552787,21.5929688832387,18.0332377076929,19.1432248174595,13.9645790760691,9.53847150508332,6.26041717530147,2.21415221969403,2.35498091762062,1.35736880313981,0.592905254174298,5.6727335943472,2.94838492669805,3.14806957338795,3.85434230638156,1.92941727801933,2.03700681425136,2.5892652370573,0.972811360650212,1.92192989231657,1.43768206527355,2.97712758134803,1.5601883655728,0.505157755894224,0.896987067609561,0.482443521363367,4.80358294433172,7.57965647081939,14.3409179268983,16.1257831486429,15.7242466353296,21.9433197248779,13.0924002487308,3.31727201358258,24.2758121923534,20.1532867580385,16.4238411717212,6.55453258862952,9.49767400262426,3.7608755231193,0,0,0.491764273019036,0.827810238914197,4.0137647496948,3.7507739709505,0,0.252470927204373,2.83957397474631,4.29482618726302,9.90947629570875,3.58453196928828,5.56996685205985,5.94460714656548,7.2865926301481,7.01414058987149,11.0680577825027,12.5315313404505,6.24536374916382,5.52003371368491,7.16702621155735,7.9185659026817,0,0.728341908464944,1.81394134178851,1.13163047853539,1.18120757152309,3.07435147943927,4.39328098385976,5.45300594216258,2.85197902707777,1.58018378967908,1.05418608574999,0,16.000661470428,10.9837267359099,4.39819524861365,12.6458850668639,19.5074257006501,10.167022603318,8.55654907131029,2.13125464380219,0.938686832254841,0.21183207086382,1.10264199027481,2.30840754118072,21.6362331772513,6.93598636673792,5.72987251215055,3.28281799490123,1.7488850197791,5.93360966433631,0.854354403989263,13.2087595496462,10.7412825874433,1.31857919903284,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,10.7554237817586,8.53941761932765,7.56037385752609,8.78170843260769,4.14888871117737,4.85511646985355,5.78574190077352,2.35580347785627,1.42576470620972,0.621339313086926,0,31.2489581231916,16.7113075361669,20.222923587781,14.2075805825504,14.6991829176977,17.3688713195716,2.0832701575032,1.46803082195995,0.483168241652012,0,0.316011120628178,0.405450430580328,0.821687657318618,0.129920822977795,0.179026695667481,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.15241361331,0,0.487289403698762,0.288635524920988,0.233753804363138,1.36038230169127,0,0,0,2.31827512838629,2.43987218086537,2.01466786693992,3.85863082342319,0,7.90652579663893,6.44455331110048,10.3121192419091,3.60891682921744,2.74033007908257,3.0215755895588,1.35004500046361,1.35096360967266,4.07828168085784,2.07104124700728,4.04770655578289,15.5619700626402,13.8294220660849,9.48116196566347,4.19226325255965,4.22840069435032,14.2237905793034,14.0103838922448,10.5903339165299,9.09709962349671,12.673964994512,11.5062068245506,12.2670374785546,13.4452820050225,11.8891420738119,10.9547548995107,10.7772423128716,8.48800570040302,10.714233420886,12.5119082114238,12.343293085875,11.5359274003569,11.6833733074187,12.4997918303803,14.5869539643762,9.47683608386777,11.8903182367302,13.6796249947678,12.0865661322817,14.0285567914435,11.5075967580449,8.56988996667402,7.36615877705441,12.0850736125053,10.4169569929816,15.4882558321526,10.7608539884888,9.02458427002853,6.31251495827183,2.8676884485537,1.39120701372253
|phase1_expression=11.8510146857548,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,2.89147186513637,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,1.09843091367236,3.11087838518853,1.67983705950435,2.87505128729943,0,0,0,1.28629718017973,0.573066879877513,1.03134418455488,23.8733423814325,22.2176211294254,26.6209189472595,0.338844532069132,0,0.449949858640699,0,0,1.79760066311043,1.15265491596466,28.2035745479059,20.520902626417,28.1835448210852,5.42736870367227,8.1721360152097,22.6607978547665,22.2361492762308,20.2228133054205,3.30347642998166,3.19218345212969,4.14737639791857,20.1786020227197,16.8337264228434,22.3992749339407,1.67509799400829,3.93933827022176,3.81995619442025,19.1508580557884,21.6404954814636,31.6879057903011,0.454357159999104,5.36558076758177,0,0,0,0,0,0.448026887097336,1.26399978118577,0,0,0,6.33795388995062,0,0,0,0.216491041011214,0,0,0.22836775943812,2.58937883647172,1.1875371125186,5.03107447621794,1.82679286987285,3.92046345335299,1.3565037649736,3.76283862834255,0.628332956648377,1.23597483867187,0.144599356919912,0,2.91180329905337,2.42925670306433,3.87900202508178,0,0.878342391034642,1.04723353406728,0.766371165625774,0,0,0,4.04434726393021,3.66000482254901,24.3769443098957,6.08385120672968,2.55715457330331,3.32460871295296,4.38051410282946,7.23059483337246,1.11966273549084,0.758168275301024,2.10441855886474,8.84819012146385,14.4838325793088,19.086585759367,30.4423732028144,25.309577684294,41.6369590925762,37.1995846502123,8.2785078636485,20.0478233427543,28.7441241855085,18.8267702855425,8.54863356467542,23.0779216857246,15.3230953269753,18.314610140307,11.3449532086541,0,0,0,5.59239585845855,9.38104239924385,4.14142741360334,4.02466050494857,2.36117078096885,2.46827380619805,3.0229412817553,0.536546802799238,1.40118410840603,1.15191894939436,1.14917224855367,0.648550476366846,0.146199987425332,0.219550115291051,0.402619256281115,2.52347938276953,5.04232600658494,0,0.528901133327089,9.17139477301506,13.7019636397659,7.98978260196979,7.86565746031036,4.22518283305254,5.89699440948933,0.474529061544512,3.45867804920423,4.27269854960458,3.97912944082302,2.53453313254856,0.898819408654221,1.51296634912286,1.1948476395262,11.0007382552787,21.5929688832387,18.0332377076929,19.1432248174595,13.9645790760691,9.53847150508332,6.26041717530147,2.21415221969403,2.35498091762062,1.35736880313981,0.592905254174298,5.6727335943472,2.94838492669805,3.14806957338795,3.85434230638156,1.92941727801933,2.03700681425136,2.5892652370573,0.972811360650212,1.92192989231657,1.43768206527355,2.97712758134803,1.5601883655728,0.505157755894224,0.896987067609561,0.482443521363367,4.80358294433172,7.57965647081939,14.3409179268983,16.1257831486429,15.7242466353296,21.9433197248779,13.0924002487308,3.31727201358258,24.2758121923534,20.1532867580385,16.4238411717212,6.55453258862952,9.49767400262426,3.7608755231193,0,0,0.491764273019036,0.827810238914197,4.0137647496948,3.7507739709505,0,0.252470927204373,2.83957397474631,4.29482618726302,9.90947629570875,3.58453196928828,5.56996685205985,5.94460714656548,7.2865926301481,7.01414058987149,11.0680577825027,12.5315313404505,6.24536374916382,5.52003371368491,7.16702621155735,7.9185659026817,0,0.728341908464944,1.81394134178851,1.13163047853539,1.18120757152309,3.07435147943927,4.39328098385976,5.45300594216258,2.85197902707777,1.58018378967908,1.05418608574999,0,16.000661470428,10.9837267359099,4.39819524861365,12.6458850668639,19.5074257006501,10.167022603318,8.55654907131029,2.13125464380219,0.938686832254841,0.21183207086382,1.10264199027481,2.30840754118072,21.6362331772513,6.93598636673792,5.72987251215055,3.28281799490123,1.7488850197791,5.93360966433631,0.854354403989263,13.2087595496462,10.7412825874433,1.31857919903284,0.820165366326151,0.457556346413045,0,0,0,0.954670618015114,10.7554237817586,8.53941761932765,7.56037385752609,8.78170843260769,4.14888871117737,4.85511646985355,5.78574190077352,2.35580347785627,1.42576470620972,0.621339313086926,0,31.2489581231916,16.7113075361669,20.222923587781,14.2075805825504,14.6991829176977,17.3688713195716,2.0832701575032,1.46803082195995,0.483168241652012,0,0.316011120628178,0.405450430580328,0.821687657318618,0.129920822977795,0.179026695667481,0.79472541912506,0.240390899039938,0.147689527174577,0.403865799792591,0.15241361331,0,0.487289403698762,0.288635524920988,0.233753804363138,1.36038230169127,0,0,0,2.31827512838629,2.43987218086537,2.01466786693992,3.85863082342319,0,7.90652579663893,6.44455331110048,10.3121192419091,3.60891682921744,2.74033007908257,3.0215755895588,1.35004500046361,1.35096360967266,4.07828168085784,2.07104124700728,4.04770655578289,15.5619700626402,13.8294220660849,9.48116196566347,4.19226325255965,4.22840069435032,14.2237905793034,14.0103838922448,10.5903339165299,9.09709962349671,12.673964994512,11.5062068245506,12.2670374785546,13.4452820050225,11.8891420738119,10.9547548995107,10.7772423128716,8.48800570040302,10.714233420886,12.5119082114238,12.343293085875,11.5359274003569,11.6833733074187,12.4997918303803,14.5869539643762,9.47683608386777,11.8903182367302,13.6796249947678,12.0865661322817,14.0285567914435,11.5075967580449,8.56988996667402,7.36615877705441,12.0850736125053,10.4169569929816,15.4882558321526,10.7608539884888,9.02458427002853,6.31251495827183,2.8676884485537,1.39120701372253
|short_description=p1@Robo2
|short_description=p1@Robo2
}}
}}

Latest revision as of 17:57, 25 September 2015

Short description:p1@Robo2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Robo2_5end
Coexpression cluster:MCL_coexpression_mm9:1700
Association with transcript: -130bp_to_ENSMUST00000140062_5end
EntrezGene:Robo2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Robo2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.68
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C323.87
Mouse Granule cells, donor2.CNhs12357.11731-123E322.22
Mouse Granule cells, donor3.CNhs12108.11636-122C726.62
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.20
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.52
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D928.18
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.17
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.83
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.82
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F95.37
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.34
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I13.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.04
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F124.38
cortex, adult.CNhs10473.12-14D56.08
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.23
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E214.48
eyeball, embryo E15.CNhs10593.426-16C919.09
eyeball, embryo E17.CNhs11023.1261-18D430.44
eyeball, neonate N00.CNhs11207.633-15C625.31
eyeball, neonate N01.CNhs11140.1532-43E741.64
eyeball, neonate N02.CNhs11205.1551-44G837.20
eyeball, neonate N16.CNhs11188.777-19A28.28
forelimb, embryo E11.CNhs10596.335-25E220.05
forelimb, embryo E12.CNhs10600.359-14H228.74
forelimb, embryo E13.CNhs10589.384-1E218.83
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C415.32
forelimb, embryo E18.CNhs11008.1520-43B518.31
gonad, embryo E13.CNhs11044.1564-45I611.34
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.52
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I59.17
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D87.99
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F75.90
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F23.98
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F821.59
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C713.96
kidney, neonate N00.CNhs11214.646-21G79.54
kidney, neonate N10.CNhs11206.758-6D56.26
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F85.67
liver, embryo E13.CNhs10524.378-3H62.95
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A621.94
lung, embryo E18.CNhs10583.1287-20I613.09
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E524.28
lung, neonate N07.CNhs11111.715-19A320.15
lung, neonate N10.CNhs11219.750-23E616.42
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C79.50
lung, neonate N30.CNhs11133.1394-42H23.76
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.57
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.94
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I912.53
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.17
oviduct, adult pregnant day01.CNhs10500.988-6G67.92
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G94.39
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G816.00
pituitary gland, embryo E12.CNhs11018.346-16E610.98
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A512.65
pituitary gland, embryo E15.CNhs10592.427-16B919.51
pituitary gland, embryo E16.CNhs11036.449-43F610.17
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G421.64
skin, neonate N03.CNhs11215.662-22H36.94
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C113.21
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G88.54
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C64.15
stomach, neonate N03.CNhs11193.1340-24B84.86
stomach, neonate N07.CNhs11210.718-18A95.79
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F531.25
testis, embryo E15.CNhs11034.443-27C516.71
testis, embryo E16.CNhs11033.470-26G520.22
testis, embryo E17.CNhs11029.486-18I514.21
testis, embryo E18.CNhs11027.503-18G514.70
testis, neonate N00.CNhs11189.1300-22B717.37
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.49
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I84.05
whole body, embryo E12.CNhs10587.857-27C915.56
whole body, embryo E13.CNhs10512.372-23H213.83
whole body, embryo E14.5.CNhs10578.420-27D29.48
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.50
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.09
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B310.76
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.05e-0933
neuronal stem cell1.05e-0933
neuroblast1.05e-0933
electrically signaling cell1.05e-0933
CNS neuron (sensu Vertebrata)5.83e-0923
neuroblast (sensu Vertebrata)5.83e-0923
ectodermal cell5.30e-0744
neurectodermal cell5.30e-0744
neural cell7.05e-0743

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.75e-1195
ectoderm4.75e-1195
presumptive ectoderm4.75e-1195
ecto-epithelium3.63e-1073
neurectoderm3.66e-1064
neural plate3.66e-1064
presumptive neural plate3.66e-1064
pre-chordal neural plate1.00e-0949
central nervous system3.07e-0973
nervous system7.06e-0975
embryo9.80e-08320
neural tube7.37e-0752
neural rod7.37e-0752
future spinal cord7.37e-0752
neural keel7.37e-0752
regional part of nervous system9.93e-0754
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:74411812..74411873,-&oldid=4205799"