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FFCP PHASE2:Mm9::chr8:73278578..73278650,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:19339 |HGNC= |MCL_coexpression_id=1 |TSSclassifier=NA |UniProt=uniprot:P63011,uniprot:D3YZP5,uniprot:Q0PD63 |associ...")
 
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|DHSsupport=NA
|DHSsupport=NA
|DPIdataset=NA
|DPIdataset=NA
|EntrezGene=entrezgene:19339
|EntrezGene=19339
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|MCL_coexpression_id=1
|TSSclassifier=NA
|TSSclassifier=NA
|UniProt=uniprot:P63011,uniprot:D3YZP5,uniprot:Q0PD63
|UniProt=P63011,D3YZP5,Q0PD63
|association_with_transcript=0bp_to_ENSMUST00000034301,ENSMUST00000110090,ENSMUST00000110093,ENSMUST00000143118,NM_001166399,NM_009001,uc009mbi.2,uc009mbj.2_5end
|association_with_transcript=0bp_to_ENSMUST00000034301,ENSMUST00000110090,ENSMUST00000110093,ENSMUST00000143118,NM_001166399,NM_009001,uc009mbi.2,uc009mbj.2_5end
|cluster_id=chr8:73278578..73278650,+
|cluster_id=chr8:73278578..73278650,+

Latest revision as of 17:52, 25 September 2015

Short description:p1@Rab3a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab3a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000034301, ENSMUST00000110090, ENSMUST00000110093, ENSMUST00000143118, NM_001166399, NM_009001, uc009mbi.2, uc009mbj.2_5end
EntrezGene:Rab3a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rab3a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G758.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I612.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.73
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.18
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.47
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.46
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3182.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.41
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B916.72
Ileum epithelium, pool2.CNhs13232.10253-104C110.33
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C810.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I324.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G627.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.74
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.36
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B762.59
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C238.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B848.11
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C343.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C441.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C3384.81
Mouse Granule cells, donor2.CNhs12357.11731-123E3420.02
Mouse Granule cells, donor3.CNhs12108.11636-122C7447.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C628.80
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E718.79
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.92
Mouse Microglia, donor1.CNhs12629.11718-123C844.64
Mouse Microglia, donor2.CNhs12634.11736-123E867.24
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5229.78
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5252.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9251.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1810.11
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5726.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2227.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2189.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6256.46
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31383.06
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3977.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7995.06
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4366.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4384.52
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8333.91
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41209.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5961.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6875.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6633.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6563.22
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1485.57
Mouse Schwann, donor1.CNhs12507.11728-123D99.92
Mouse Schwann, donor2.CNhs12573.11746-123F925.24
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A784.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I715.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I818.37
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G652.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.40
accessory axillary lymph node, adult.CNhs10475.1063-29H910.62
adrenal gland, adult.CNhs10508.49-24D774.37
adrenal gland, embryo E14.CNhs11038.406-44C529.15
adrenal gland, embryo E16.CNhs11004.1254-43D652.67
adrenal gland, embryo E17.CNhs11043.1263-45I159.73
adrenal gland, embryo E18.CNhs11026.1262-18F570.69
adrenal gland, neonate N00.CNhs11191.1311-23C145.39
adrenal gland, neonate N25.CNhs11223.1377-27I369.62
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H133.69
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F532.19
bone (os femoris), neonate N16.CNhs11225.1525-43A636.88
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B2584.39
cerebellum, neonate N30.CNhs11135.1395-42I2584.36
colon, adult.CNhs10468.36-18H719.93
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.96
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41058.27
corpus striatum, adult.CNhs10487.19-21D8764.48
corpus striatum, neonate N00.CNhs11226.630-43F1344.29
cortex, adult.CNhs10473.12-14D5946.13
cortex, neonate N30.CNhs11107.1392-42F2874.80
diencephalon, adult.CNhs10482.20-12F2995.93
diencephalon, neonate N30.CNhs11201.1388-42B2818.18
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.77
epididymis, adult.CNhs10490.58-23B243.72
eyeball, adult.CNhs10484.31-12G4104.59
eyeball, embryo E12.CNhs11016.345-16C612.10
eyeball, embryo E14.CNhs10521.399-16E240.46
eyeball, embryo E15.CNhs10593.426-16C949.34
eyeball, embryo E17.CNhs11023.1261-18D452.60
eyeball, neonate N00.CNhs11207.633-15C673.75
eyeball, neonate N01.CNhs11140.1532-43E786.73
eyeball, neonate N02.CNhs11205.1551-44G898.39
eyeball, neonate N16.CNhs11188.777-19A2243.96
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H212.10
forelimb, embryo E13.CNhs10589.384-1E212.14
forelimb, embryo E14.CNhs10577.413-26A818.19
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C420.55
forelimb, embryo E18.CNhs11008.1520-43B515.85
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E913.88
heart, embryo E12.CNhs11015.353-12F517.82
heart, embryo E13.CNhs11013.376-3I915.31
heart, embryo E14.CNhs10597.403-26D419.41
heart, embryo E15.CNhs11017.431-16C821.45
heart, embryo E16.CNhs11021.457-17C623.14
heart, embryo E17.CNhs11025.479-18E521.39
heart, embryo E18.CNhs11030.1283-20G329.78
heart, neonate N00.CNhs11213.639-21E325.45
heart, neonate N03.CNhs11221.1349-25I234.56
heart, neonate N10.CNhs11118.749-24G149.74
heart, neonate N16.CNhs11209.782-15G183.74
heart, neonate N20.CNhs11127.821-26I690.94
heart, neonate N25.CNhs11196.1351-25D379.92
heart, neonate N30.CNhs11202.1390-42D278.78
hippocampus, adult.CNhs10478.13-16E8802.89
hippocampus, neonate N00.CNhs11228.627-43G1346.48
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A314.54
intestine, embryo E12.CNhs11019.1251-16I512.37
intestine, embryo E13.CNhs11010.381-16D515.56
intestine, embryo E15.CNhs10602.976-16D815.98
intestine, embryo E16.CNhs10585.463-22H416.94
intestine, embryo E17.CNhs10582.482-18D319.35
intestine, embryo E18.CNhs10526.1289-20F726.06
intestine, neonate N00.CNhs11126.644-26D113.29
intestine, neonate N01.CNhs11192.1322-23E918.94
intestine, neonate N06.CNhs11102.688-20B814.58
intestine, neonate N07.CNhs11095.720-20F222.68
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E312.54
intestine, neonate N30.CNhs11131.1384-42G116.73
kidney, embryo E14.CNhs10606.411-4I912.52
kidney, embryo E15.CNhs10997.434-16F813.48
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I213.44
kidney, embryo E18.CNhs11001.1288-20C711.25
kidney, neonate N00.CNhs11214.646-21G712.13
kidney, neonate N10.CNhs11206.758-6D514.54
kidney, neonate N20.CNhs11113.832-19I121.99
kidney, neonate N25.CNhs11122.1353-25F315.70
kidney, neonate N30.CNhs11203.1385-42H117.40
liver, adult pregnant day01.CNhs10466.508-5B219.86
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A39.85
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B131.04
lung, embryo E12.CNhs10522.354-16G212.70
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C57.47
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A613.23
lung, embryo E18.CNhs10583.1287-20I618.09
lung, neonate N00.CNhs11224.640-42C624.20
lung, neonate N06.CNhs11212.683-20E517.02
lung, neonate N07.CNhs11111.715-19A321.04
lung, neonate N10.CNhs11219.750-23E615.63
lung, neonate N20.CNhs11109.822-18A428.51
lung, neonate N25.CNhs11119.1359-25C723.66
lung, neonate N30.CNhs11133.1394-42H231.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B637.37
mammary gland, adult pregnant day19.CNhs10476.588-5H242.77
medulla oblongata, adult.CNhs10477.17-12C21082.91
medulla oblongata, neonate N30.CNhs11200.1396-42A3908.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C275.49
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E154.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E382.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.09
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D446.96
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D569.56
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D677.87
olfactory brain, adult.CNhs10489.18-22I9737.11
ovary, adult.CNhs10507.91-2I724.84
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I415.96
oviduct, adult pregnant day01.CNhs10500.988-6G619.96
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F412.14
pancreas, embryo E15.CNhs11042.1556-45F217.84
pancreas, embryo E16.CNhs11003.460-26E526.22
pancreas, embryo E17.CNhs10599.1558-45G345.48
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G925.33
pancreas, neonate N01.CNhs11138.1531-43D719.27
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B649.93
pancreas, neonate N25.CNhs11094.1555-45E224.25
pancreas, neonate N30.CNhs11182.1548-44H544.35
pituitary gland, adult.CNhs10493.21-1G8102.47
pituitary gland, embryo E12.CNhs11018.346-16E614.95
pituitary gland, embryo E13.CNhs11009.370-44C727.04
pituitary gland, embryo E14.CNhs11037.398-44A539.87
pituitary gland, embryo E15.CNhs10592.427-16B958.70
pituitary gland, embryo E16.CNhs11036.449-43F684.19
pituitary gland, embryo E17.CNhs11039.1265-44F596.75
pituitary gland, neonate N00.CNhs11190.1308-22E9119.65
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G38.47
prostate, adult.CNhs10470.859-1F862.63
skin, adult.CNhs10492.30-1C318.30
skin, neonate N00.CNhs11124.650-25G412.92
skin, neonate N03.CNhs11215.662-22H311.76
skin, neonate N06.CNhs11097.693-20I511.10
skin, neonate N10.CNhs11108.762-6C48.21
small intestine, neonate N16.CNhs11114.790-21I114.87
spinal cord, adult.CNhs10505.24-13C91029.67
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D15.84
spleen, neonate N20.CNhs11112.824-19H16.97
spleen, neonate N25.CNhs11099.1354-25G37.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H637.23
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G815.05
stomach, embryo E16.CNhs11022.459-17D414.26
stomach, embryo E17.CNhs11006.1035-18D517.77
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B818.21
stomach, neonate N07.CNhs11210.718-18A920.83
stomach, neonate N25.CNhs11104.1355-25E425.91
stomach, neonate N30.CNhs11134.1386-42I117.89
submandibular gland, adult.CNhs10469.59-29C175.18
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F57.92
testis, embryo E15.CNhs11034.443-27C512.57
testis, embryo E16.CNhs11033.470-26G519.64
testis, embryo E17.CNhs11029.486-18I516.53
testis, embryo E18.CNhs11027.503-18G517.06
testis, neonate N00.CNhs11189.1300-22B713.50
testis, neonate N07.CNhs11222.726-26I413.93
testis, neonate N10.CNhs11204.763-44D915.31
testis, neonate N20.CNhs11110.839-18H38.46
testis, neonate N30.CNhs11130.1391-42E213.83
thymus, adult.CNhs10471.38-12B59.16
thymus, embryo E14.CNhs11041.402-44I47.50
thymus, embryo E15.CNhs11005.430-45I25.55
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G47.15
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D38.00
thymus, neonate N10.CNhs11194.748-24E46.05
thymus, neonate N20.CNhs11186.820-7A25.65
thymus, neonate N25.CNhs11125.1362-25G74.52
thymus, neonate N30.CNhs11132.1393-42G27.83
tongue, adult.CNhs10499.32-1B451.24
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.79
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E435.93
uterus, adult pregnant day19.CNhs10497.590-15F512.20
uterus, adult.CNhs10509.92-27E510.99
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F844.64
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11179.20
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21164.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31124.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7979.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4944.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5932.16
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6927.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71023.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81034.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91118.36
whole body, embryo E11.CNhs11014.324-5I826.47
whole body, embryo E12.CNhs10587.857-27C939.10
whole body, embryo E13.CNhs10512.372-23H262.32
whole body, embryo E14.5.CNhs10578.420-27D247.89
whole body, embryo E14.CNhs10519.395-14B179.65
whole body, embryo E16.CNhs10514.453-14F278.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.01
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G567.79
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G586.01
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G578.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G588.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G577.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G571.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G577.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G573.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G570.97
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G573.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G571.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G564.29
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G564.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G573.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G567.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G565.57
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G571.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G564.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G567.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G578.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G562.08
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G570.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G577.44
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G574.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G569.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G563.02
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G560.58
whole body, embryo E17.5.CNhs10513.490-9F952.86
whole body, embryo E17.CNhs10517.475-3I5183.36
whole body, embryo E18.CNhs10516.493-3B377.20
whole body, neonate N00.CNhs10525.657-19C267.68
whole body, neonate N01.CNhs10576.659-23C661.59
whole body, neonate N06.CNhs10515.692-21D170.37
whole body, neonate N10.CNhs10518.761-6B468.86





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.90e-1433
neuronal stem cell8.90e-1433
neuroblast8.90e-1433
electrically signaling cell8.90e-1433
ectodermal cell3.03e-1344
neurectodermal cell3.03e-1344
CNS neuron (sensu Vertebrata)3.21e-1323
neuroblast (sensu Vertebrata)3.21e-1323
neural cell4.05e-1343
electrically responsive cell2.58e-1139
electrically active cell2.58e-1139

Uber anatomy
Ontology termp-valuen
central nervous system4.34e-3173
nervous system4.89e-3075
ectoderm-derived structure8.61e-2995
ectoderm8.61e-2995
presumptive ectoderm8.61e-2995
structure with developmental contribution from neural crest7.90e-2892
neurectoderm2.50e-2764
neural plate2.50e-2764
presumptive neural plate2.50e-2764
regional part of nervous system1.32e-2654
neural tube3.91e-2552
neural rod3.91e-2552
future spinal cord3.91e-2552
neural keel3.91e-2552
ecto-epithelium2.69e-2473
brain4.90e-2247
future brain4.90e-2247
regional part of brain1.95e-2146
pre-chordal neural plate3.12e-2049
gray matter5.61e-1934
anterior neural tube7.02e-1940
regional part of forebrain3.48e-1839
forebrain3.48e-1839
future forebrain3.48e-1839
brain grey matter3.48e-1629
regional part of telencephalon3.48e-1629
telencephalon3.48e-1629
cerebral cortex9.00e-1221
cerebral hemisphere9.00e-1221
pallium9.00e-1221
regional part of cerebral cortex7.37e-1017
anatomical conduit2.55e-09122
tube1.63e-08114
occipital lobe7.85e-0810
visual cortex7.85e-0810
neocortex7.85e-0810
posterior neural tube8.04e-0712
chordal neural plate8.04e-0712
tissue8.25e-07349
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