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FFCP PHASE1:Mm9::chr2:130249978..130250029,-: Difference between revisions

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(Created page with "{{FFCP |id=chr2:130249978..130250029,- |short_description=p1@Fam113a |description=CAGE_peak_1_at_Fam113a_5end |association_with_transcript=0bp_to_ENSMUST00000089581,ENSMUS...")
 
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{{FFCP
{{FFCP
|id=chr2:130249978..130250029,-
|DHSsupport=NA
|short_description=p1@Fam113a
|DPIdataset=NA
|description=CAGE_peak_1_at_Fam113a_5end
|association_with_transcript=0bp_to_ENSMUST00000089581,ENSMUST00000123977,ENSMUST00000131561,ENSMUST00000153663,NM_178762,uc008miv.2,uc008miw.2,uc008mix.2,uc008miy.2_5end
|EntrezGene=319513
|EntrezGene=319513
|HGNC=
|HGNC=
|MCL_coexpression_id=1392
|TSSclassifier=NA
|UniProt=Q6P1Z5,Q8BFT7,Q8BUE8,Q8BUZ8
|UniProt=Q6P1Z5,Q8BFT7,Q8BUE8,Q8BUZ8
|association_with_transcript=0bp_to_ENSMUST00000089581,ENSMUST00000123977,ENSMUST00000131561,ENSMUST00000153663,NM_178762,uc008miv.2,uc008miw.2,uc008mix.2,uc008miy.2_5end
|cluster_id=chr2:130249978..130250029,-
|description=CAGE_peak_1_at_Fam113a_5end
|id=chr2:130249978..130250029,-
|ontology_enrichment_celltype=CL:0000117!9.14e-09!23;CL:0000337!9.14e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000117,9.14e-09,23;CL:0000337,9.14e-09,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.57e-21!73;UBERON:0005743!2.57e-21!73;UBERON:0000033!1.71e-20!63;UBERON:0000073!1.06e-19!75;UBERON:0001016!1.06e-19!75;UBERON:0001049!2.45e-19!52;UBERON:0005068!2.45e-19!52;UBERON:0006241!2.45e-19!52;UBERON:0007135!2.45e-19!52;UBERON:0002346!5.65e-19!71;UBERON:0003075!5.65e-19!71;UBERON:0007284!5.65e-19!71;UBERON:0004121!6.48e-19!102;UBERON:0000924!6.48e-19!102;UBERON:0006601!6.48e-19!102;UBERON:0000955!6.52e-19!50;UBERON:0006238!6.52e-19!50;UBERON:0003056!1.64e-18!49;UBERON:0002616!2.99e-18!49;UBERON:0003080!1.07e-16!40;UBERON:0002780!4.20e-16!39;UBERON:0001890!4.20e-16!39;UBERON:0006240!4.20e-16!39;UBERON:0002020!1.97e-13!34;UBERON:0000153!2.02e-12!94;UBERON:0002791!2.53e-12!29;UBERON:0003528!2.53e-12!29;UBERON:0001893!2.53e-12!29;UBERON:0007811!8.29e-11!86;UBERON:0000956!1.35e-09!21;UBERON:0001869!1.35e-09!21;UBERON:0000203!1.35e-09!21;UBERON:0000468!4.37e-08!333;UBERON:0002619!1.16e-07!17;UBERON:0000025!1.79e-07!114;UBERON:0004111!3.54e-07!122;UBERON:0000479!8.73e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.57e-21,73;UBERON:0002346,4.64e-20,64;UBERON:0003075,4.64e-20,64;UBERON:0007284,4.64e-20,64;UBERON:0001016,1.06e-19,75;UBERON:0000073,1.51e-19,54;UBERON:0004121,2.04e-19,95;UBERON:0000924,2.04e-19,95;UBERON:0006601,2.04e-19,95;UBERON:0001049,2.45e-19,52;UBERON:0005068,2.45e-19,52;UBERON:0006241,2.45e-19,52;UBERON:0007135,2.45e-19,52;UBERON:0003056,1.64e-18,49;UBERON:0000955,3.18e-18,47;UBERON:0006238,3.18e-18,47;UBERON:0002616,1.45e-17,46;UBERON:0010371,1.81e-17,73;UBERON:0003080,1.07e-16,40;UBERON:0002780,4.20e-16,39;UBERON:0001890,4.20e-16,39;UBERON:0006240,4.20e-16,39;UBERON:0002020,1.97e-13,34;UBERON:0003528,2.53e-12,29;UBERON:0002791,2.53e-12,29;UBERON:0001893,2.53e-12,29;UBERON:0010314,4.21e-11,92;UBERON:0000956,1.35e-09,21;UBERON:0001869,1.35e-09,21;UBERON:0000203,1.35e-09,21;UBERON:0002619,1.16e-07,17;UBERON:0000025,1.79e-07,114;UBERON:0004111,3.54e-07,122;UBERON:0000479,8.62e-07,349
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25821495763,10.245326504709,12.6650286972783,8.4964538222437,10.9929096114697,7.0674104335688,5.57344385154709,14.2908042009993,27.6209539955253,17.9419855252775,18.0349754598236,16.7228021975881,12.5285028773399,17.0645686745686,14.5522975920735,9.89553324814021,11.2199498535511,32.1306880698588,30.8192106695916,8.84831137758899,12.1635129174099,11.1954943309662,8.05509102462329,6.26593434836185,6.15912199821921,5.88957702647847,4.87375439676105,6.46185279668145,6.17275133905499,6.45287584875779,5.75001496364539,4.81059208201647,7.71387554398355,11.3365191807606,5.10567692760349,4.66512054369274,2.68615386182526,13.1368923941889,8.82107634620555,14.6521299413812,10.9327873330324,10.5330141847426,22.5900737046827,27.1591889539234,21.7700295106971,17.0134650520251,18.4972280338073,30.215755895588,22.9507650078814,28.8205570063501,26.2822597210839,24.3347346523355,10.1711600632493,18.7541690498485,18.6099630272006,18.7192172142586,11.947950269795,14.1559501506511,13.3348036680969,18.9552252659783,15.7250412699989,18.9522908822848,18.2505095920973,14.7128546281139,15.8254147624101,15.9422629488125,15.45014114906,17.1465728861907,15.0649623728312,12.3461901096771,16.8955219329356,15.8974833745149,17.1434626192708,15.0854435235437,14.5446075867866,18.3136484956734,15.9985946706062,15.6537024599602,17.3781574229134,13.6796249947678,13.0371949292027,14.5896990631012,15.8970924286393,14.3816544268323,14.7323175541088,13.634442024365,21.2197272079256,22.982573170291,17.5448706334056,13.1071342969462,16.0682198937828,13.0148937280514,9.27471342481686
|phase1_expression=13.2923543096979,5.93258192986914,3.18499467572675,7.25914107136392,7.51343594919521,5.03637815735669,5.37309073369709,13.1705789910408,10.559154161375,9.36258105287974,14.3823093309424,12.2849124852818,10.6144452557348,13.2879011676876,2.99798785634096,2.63217847606774,2.09868563438444,7.09789872056035,8.22686601634433,6.79023442876848,11.9060606211498,9.13476751048145,6.26879493933445,4.31979541542198,3.89995777814189,5.16808767703518,4.73838195774982,4.09395342103189,4.18051522804023,2.26827116783938,1.77384408524244,13.3356441426523,12.916360539276,0,4.62162591602039,5.15327400611326,3.26670970019791,2.92972141515835,0,2.09409497589519,0.588231488031014,3.41522742479223,1.45653105909346,15.6112054289716,14.0913934395125,15.2343804294196,22.6893489860931,12.209408757305,11.643367684927,11.4713640453827,12.4587915246573,14.3752564364972,6.20795642413625,1.45072428402269,5.71359458542189,7.20326420900652,10.3152038377952,11.3447860301037,24.4802917640113,37.0293685490423,30.4239073682966,9.4876468979357,13.3394219416671,12.1486461832989,17.7995945262055,13.4991221839759,23.668408730954,28.432154593795,20.7379224616955,21.8709620097339,22.7150958259493,13.9968982357864,17.8903518170807,18.0061474845982,18.3064849644831,22.0612508786405,19.82085857989,15.0671058940522,16.2822925251618,23.6076455037047,23.3293491186145,17.1901412283731,12.5632349550621,15.757353080887,22.1557459276375,18.2669722993674,15.8032565687004,22.5543329448614,4.46784540665786,7.02815508993105,9.56552812715537,18.9293252935905,6.11974200336975,19.9690180905992,20.1430689408777,22.4013443548668,9.97155382935438,11.4188316127299,9.09251016110041,11.3068663843309,14.7885590765515,17.9657068380045,5.09610479413291,7.11066703153331,4.11332977921307,4.81383744402687,2.52762222507392,8.44960709921044,5.95557132388495,16.7739617143252,12.3174582003956,13.3964810457342,11.0695438682908,9.79697163592047,15.1689432205059,10.9329934456818,9.88779870937496,16.33972733195,7.07688441559899,13.1031148457401,6.62524555381181,5.33362778448744,5.59175283654366,14.0534782565543,16.3368431314495,5.36459815938042,2.63593273913025,1.79970819298022,4.3203877204842,23.666921025962,23.7900313465686,23.8743269014442,23.6401075461496,24.2929684463814,19.7398642331582,16.2241263067758,19.7568365869614,7.83763914843586,12.8888606801174,14.9413717679397,15.7445735984871,17.4725599369439,17.2859644613135,20.3451504078215,20.8191687403063,14.9893052733274,14.0552586839593,16.815719098036,11.2095356325078,17.9650776159428,20.4103304030181,19.070028721199,28.9169139194622,18.4573648256748,20.1666493679785,23.4860434845822,2.80885274925294,2.31613116403244,5.11494298912067,7.87077935634907,8.67746421930056,8.28285482720668,10.4167683657493,10.4285042826124,10.0273623376796,8.60375595576509,6.17028823219124,5.48797109125697,5.26591519723137,5.25335885053105,9.1607754786817,7.01759939641595,10.0993053033883,8.18659154438268,24.6039239820029,23.3593470100976,5.61711931072457,6.87571473325215,15.5700422890721,13.9342003116263,13.1444810548535,10.0841762311671,8.2279876222602,11.4135375667535,6.64340686162316,7.24675400785648,8.04272668160862,7.36138946552258,10.3330966173134,3.59527763461689,4.53889904736858,6.17337947088538,15.5527678781527,13.3670759753383,13.5249282807697,13.4409876377907,14.3524840504043,10.5905088034381,10.0546094027569,9.00421902675573,10.9899109488962,9.87177311374404,14.2297261001831,8.17541018008861,8.64859578498093,4.72210436008193,4.46292267054706,5.30589751455317,6.11102044275408,9.49397253587675,7.45822043165163,10.9824565275233,8.62609239164127,11.1642284300551,14.3537329632698,15.912469310668,13.6342034276653,17.3679667690812,9.23765950833023,11.9379589415405,12.548303186036,13.5796068620151,13.6120344007331,12.2279567932526,13.3304438896168,12.0982861671835,10.4039195110086,10.1873757238436,11.6401981119966,11.6342953448174,10.0157289482219,8.53429445630918,1.50791283939272,2.71952841909355,5.90117127622843,12.6930903300177,20.5504755184374,15.2375192569864,16.8852993737976,8.33154059774431,9.4652465824877,9.37052986311932,12.9254038639679,10.9925647058174,11.8083297263669,11.6061377623421,12.5491317519217,15.7818163272108,13.0444966722353,26.3483479465882,16.3231097989509,25.6414469280848,19.220661203722,18.1467135269789,22.5666735177937,13.595715624679,11.7906187216253,13.7681708221806,19.7852268230118,14.1420168054207,11.8877014857382,11.9966130727577,17.1118741624666,13.5895805912401,18.9753495434998,13.4076206222643,29.6182457005796,13.8647042404109,19.4038025674132,16.5039516974326,22.8768901398533,21.0475204770443,20.8977256164694,24.9661258273971,4.69343416127421,10.591603543191,7.93902232997863,10.5527201882547,15.0161916827192,9.71038091343309,8.59480876822583,10.669158483429,6.70405924248657,21.1384844291981,7.17657699350981,11.5576646059405,11.1116716421827,2.0720530270516,4.37421528707281,6.17701067657611,2.54967644990783,3.49878630809145,3.45499934511059,6.68269432610579,16.449471666219,15.2489600345137,11.7725821495763,10.245326504709,12.6650286972783,8.4964538222437,10.9929096114697,7.0674104335688,5.57344385154709,14.2908042009993,27.6209539955253,17.9419855252775,18.0349754598236,16.7228021975881,12.5285028773399,17.0645686745686,14.5522975920735,9.89553324814021,11.2199498535511,32.1306880698588,30.8192106695916,8.84831137758899,12.1635129174099,11.1954943309662,8.05509102462329,6.26593434836185,6.15912199821921,5.88957702647847,4.87375439676105,6.46185279668145,6.17275133905499,6.45287584875779,5.75001496364539,4.81059208201647,7.71387554398355,11.3365191807606,5.10567692760349,4.66512054369274,2.68615386182526,13.1368923941889,8.82107634620555,14.6521299413812,10.9327873330324,10.5330141847426,22.5900737046827,27.1591889539234,21.7700295106971,17.0134650520251,18.4972280338073,30.215755895588,22.9507650078814,28.8205570063501,26.2822597210839,24.3347346523355,10.1711600632493,18.7541690498485,18.6099630272006,18.7192172142586,11.947950269795,14.1559501506511,13.3348036680969,18.9552252659783,15.7250412699989,18.9522908822848,18.2505095920973,14.7128546281139,15.8254147624101,15.9422629488125,15.45014114906,17.1465728861907,15.0649623728312,12.3461901096771,16.8955219329356,15.8974833745149,17.1434626192708,15.0854435235437,14.5446075867866,18.3136484956734,15.9985946706062,15.6537024599602,17.3781574229134,13.6796249947678,13.0371949292027,14.5896990631012,15.8970924286393,14.3816544268323,14.7323175541088,13.634442024365,21.2197272079256,22.982573170291,17.5448706334056,13.1071342969462,16.0682198937828,13.0148937280514,9.27471342481686
|short_description=p1@Fam113a
}}
}}

Latest revision as of 17:42, 25 September 2015

Short description:p1@Fam113a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Fam113a_5end
Coexpression cluster:MCL_coexpression_mm9:1392
Association with transcript: 0bp_to_ENSMUST00000089581, ENSMUST00000123977, ENSMUST00000131561, ENSMUST00000153663, NM_178762, uc008miv.2, uc008miw.2, uc008mix.2, uc008miy.2_5end
EntrezGene:Fam113a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Fam113a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G713.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I37.26
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.38
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A27.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.79
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.34
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D815.61
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.09
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B722.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C212.21
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.47
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.20
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.34
Mouse Granule cells, donor1.CNhs12131.11713-123C324.48
Mouse Granule cells, donor2.CNhs12357.11731-123E337.03
Mouse Granule cells, donor3.CNhs12108.11636-122C730.42
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C712.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E717.80
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D213.50
Mouse Microglia, donor1.CNhs12629.11718-123C823.67
Mouse Microglia, donor2.CNhs12634.11736-123E828.43
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.87
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D922.72
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.01
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.31
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.07
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D618.27
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.80
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D94.47
Mouse Schwann, donor2.CNhs12573.11746-123F97.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C819.97
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I711.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E39.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.45
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D613.40
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F59.80
adrenal gland, neonate N00.CNhs11191.1311-23C115.17
adrenal gland, neonate N25.CNhs11223.1377-27I310.93
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H116.34
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F513.10
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I216.34
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A423.67
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F123.87
cortex, adult.CNhs10473.12-14D523.64
cortex, neonate N30.CNhs11107.1392-42F224.29
diencephalon, adult.CNhs10482.20-12F219.74
diencephalon, neonate N30.CNhs11201.1388-42B216.22
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.76
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.84
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G414.94
eyeball, embryo E12.CNhs11016.345-16C615.74
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C917.29
eyeball, embryo E17.CNhs11023.1261-18D420.35
eyeball, neonate N00.CNhs11207.633-15C620.82
eyeball, neonate N01.CNhs11140.1532-43E714.99
eyeball, neonate N02.CNhs11205.1551-44G814.06
eyeball, neonate N16.CNhs11188.777-19A216.82
forelimb, embryo E11.CNhs10596.335-25E211.21
forelimb, embryo E12.CNhs10600.359-14H217.97
forelimb, embryo E13.CNhs10589.384-1E220.41
forelimb, embryo E14.CNhs10577.413-26A819.07
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C418.46
forelimb, embryo E18.CNhs11008.1520-43B520.17
gonad, embryo E13.CNhs11044.1564-45I623.49
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C810.43
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G36.17
heart, neonate N00.CNhs11213.639-21E35.49
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G15.25
heart, neonate N16.CNhs11209.782-15G19.16
heart, neonate N20.CNhs11127.821-26I67.02
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D28.19
hippocampus, adult.CNhs10478.13-16E824.60
hippocampus, neonate N00.CNhs11228.627-43G123.36
intestinal mucosa, adult.CNhs10506.860-29I35.62
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I515.57
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D813.14
intestine, embryo E16.CNhs10585.463-22H410.08
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F711.41
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E97.25
intestine, neonate N06.CNhs11102.688-20B88.04
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A510.33
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G16.17
kidney, embryo E14.CNhs10606.411-4I915.55
kidney, embryo E15.CNhs10997.434-16F813.37
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I213.44
kidney, embryo E18.CNhs11001.1288-20C714.35
kidney, neonate N00.CNhs11214.646-21G710.59
kidney, neonate N10.CNhs11206.758-6D510.05
kidney, neonate N20.CNhs11113.832-19I19.00
kidney, neonate N25.CNhs11122.1353-25F310.99
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B214.23
liver, embryo E12.CNhs10601.355-15F88.18
liver, embryo E13.CNhs10524.378-3H68.65
liver, embryo E14.CNhs10594.409-16E14.72
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F55.31
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G210.98
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A315.91
liver, neonate N25.CNhs11198.1368-26H113.63
liver, neonate N30.CNhs11106.1382-42D117.37
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F812.55
lung, embryo E15.CNhs11020.432-17C513.58
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C612.10
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A310.19
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A411.63
lung, neonate N25.CNhs11119.1359-25C710.02
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H212.69
medulla oblongata, adult.CNhs10477.17-12C220.55
medulla oblongata, neonate N30.CNhs11200.1396-42A315.24
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C28.33
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E29.37
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.93
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.99
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.81
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.78
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I926.35
ovary, adult.CNhs10507.91-2I716.32
ovary, embryo E18.CNhs11040.505-44H725.64
ovary, neonate N00.CNhs11217.1299-22I419.22
oviduct, adult pregnant day01.CNhs10500.988-6G618.15
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F413.60
pancreas, embryo E15.CNhs11042.1556-45F211.79
pancreas, embryo E16.CNhs11003.460-26E513.77
pancreas, embryo E17.CNhs10599.1558-45G319.79
pancreas, embryo E18.CNhs10580.1535-43I714.14
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D712.00
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B613.59
pancreas, neonate N25.CNhs11094.1555-45E218.98
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G829.62
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C719.40
pituitary gland, embryo E14.CNhs11037.398-44A516.50
pituitary gland, embryo E15.CNhs10592.427-16B922.88
pituitary gland, embryo E16.CNhs11036.449-43F621.05
pituitary gland, embryo E17.CNhs11039.1265-44F520.90
pituitary gland, neonate N00.CNhs11190.1308-22E924.97
placenta, adult pregnant day10.CNhs10472.539-13I74.69
placenta, adult pregnant day17.CNhs10464.577-18G310.59
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C310.55
skin, neonate N00.CNhs11124.650-25G415.02
skin, neonate N03.CNhs11215.662-22H39.71
skin, neonate N06.CNhs11097.693-20I58.59
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C921.14
spleen, adult.CNhs10465.25-2G27.18
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F211.11
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H14.37
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.50
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.45
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G815.25
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A910.99
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C114.29
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F517.94
testis, embryo E15.CNhs11034.443-27C518.03
testis, embryo E16.CNhs11033.470-26G516.72
testis, embryo E17.CNhs11029.486-18I512.53
testis, embryo E18.CNhs11027.503-18G517.06
testis, neonate N00.CNhs11189.1300-22B714.55
testis, neonate N07.CNhs11222.726-26I49.90
testis, neonate N10.CNhs11204.763-44D911.22
testis, neonate N20.CNhs11110.839-18H332.13
testis, neonate N30.CNhs11130.1391-42E230.82
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I412.16
thymus, embryo E15.CNhs11005.430-45I211.20
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C16.27
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F85.89
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C46.46
thymus, neonate N07.CNhs11211.713-19D36.17
thymus, neonate N10.CNhs11194.748-24E46.45
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G74.81
thymus, neonate N30.CNhs11132.1393-42G27.71
tongue, adult.CNhs10499.32-1B411.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.67
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E413.14
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E514.65
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F810.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A122.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A227.16
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A321.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D717.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A418.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A530.22
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.28
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I810.17
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H218.61
whole body, embryo E14.5.CNhs10578.420-27D218.72
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F214.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.73
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G518.95
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.71
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.83
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.94
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.90
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G517.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.65
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.63
whole body, embryo E17.5.CNhs10513.490-9F921.22
whole body, embryo E17.CNhs10517.475-3I522.98
whole body, embryo E18.CNhs10516.493-3B317.54
whole body, neonate N00.CNhs10525.657-19C213.11
whole body, neonate N01.CNhs10576.659-23C616.07
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B49.27





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.14e-0923
neuroblast (sensu Vertebrata)9.14e-0923

Uber anatomy
Ontology termp-valuen
central nervous system2.57e-2173
neurectoderm4.64e-2064
neural plate4.64e-2064
presumptive neural plate4.64e-2064
nervous system1.06e-1975
regional part of nervous system1.51e-1954
ectoderm-derived structure2.04e-1995
ectoderm2.04e-1995
presumptive ectoderm2.04e-1995
neural tube2.45e-1952
neural rod2.45e-1952
future spinal cord2.45e-1952
neural keel2.45e-1952
pre-chordal neural plate1.64e-1849
brain3.18e-1847
future brain3.18e-1847
regional part of brain1.45e-1746
ecto-epithelium1.81e-1773
anterior neural tube1.07e-1640
regional part of forebrain4.20e-1639
forebrain4.20e-1639
future forebrain4.20e-1639
gray matter1.97e-1334
brain grey matter2.53e-1229
regional part of telencephalon2.53e-1229
telencephalon2.53e-1229
structure with developmental contribution from neural crest4.21e-1192
cerebral cortex1.35e-0921
cerebral hemisphere1.35e-0921
pallium1.35e-0921
regional part of cerebral cortex1.16e-0717
tube1.79e-07114
anatomical conduit3.54e-07122
tissue8.62e-07349
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