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FFCP PHASE1:Mm9::chr10:126632769..126632795,-: Difference between revisions

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(Created page with "{{FFCP |id=chr10:126632769..126632795,- |short_description=p1@Dtx3 |description=CAGE_peak_1_at_Dtx3_5end |association_with_transcript=0bp_to_ENSMUST00000116229,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr10:126632769..126632795,-
|DHSsupport=NA
|short_description=p1@Dtx3
|DPIdataset=NA
|description=CAGE_peak_1_at_Dtx3_5end
|association_with_transcript=0bp_to_ENSMUST00000116229,ENSMUST00000125254,ENSMUST00000144322_5end
|EntrezGene=80904
|EntrezGene=80904
|HGNC=
|HGNC=
|MCL_coexpression_id=1874
|TSSclassifier=NA
|UniProt=E9Q3J1,D3Z4X6
|UniProt=E9Q3J1,D3Z4X6
|association_with_transcript=0bp_to_ENSMUST00000116229,ENSMUST00000125254,ENSMUST00000144322_5end
|cluster_id=chr10:126632769..126632795,-
|description=CAGE_peak_1_at_Dtx3_5end
|id=chr10:126632769..126632795,-
|ontology_enrichment_celltype=CL:0002319!8.17e-10!43;CL:0000221!8.71e-10!44;CL:0000133!8.71e-10!44;CL:0000540!6.50e-09!33;CL:0000047!6.50e-09!33;CL:0000031!6.50e-09!33;CL:0000404!6.50e-09!33;CL:0000117!1.09e-08!23;CL:0000337!1.09e-08!23;CL:0000055!5.27e-08!50;CL:0000393!1.42e-07!39;CL:0000211!1.42e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002319,8.16e-10,43;CL:0000221,8.71e-10,44;CL:0000133,8.71e-10,44;CL:0000540,6.50e-09,33;CL:0000047,6.50e-09,33;CL:0000031,6.50e-09,33;CL:0000404,6.50e-09,33;CL:0000117,1.09e-08,23;CL:0000337,1.09e-08,23;CL:0000393,1.42e-07,39;CL:0000211,1.42e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.15e-29!73;UBERON:0005743!1.15e-29!73;UBERON:0000073!8.55e-28!75;UBERON:0001016!8.55e-28!75;UBERON:0000033!1.05e-25!63;UBERON:0004121!1.29e-25!102;UBERON:0000924!1.29e-25!102;UBERON:0006601!1.29e-25!102;UBERON:0002346!4.26e-25!71;UBERON:0003075!4.26e-25!71;UBERON:0007284!4.26e-25!71;UBERON:0001049!8.67e-25!52;UBERON:0005068!8.67e-25!52;UBERON:0006241!8.67e-25!52;UBERON:0007135!8.67e-25!52;UBERON:0000955!2.04e-24!50;UBERON:0006238!2.04e-24!50;UBERON:0002616!1.19e-23!49;UBERON:0003056!1.10e-21!49;UBERON:0003080!3.25e-19!40;UBERON:0002780!1.68e-18!39;UBERON:0001890!1.68e-18!39;UBERON:0006240!1.68e-18!39;UBERON:0000153!4.52e-18!94;UBERON:0007811!6.54e-16!86;UBERON:0002020!2.86e-15!34;UBERON:0002791!6.30e-14!29;UBERON:0003528!6.30e-14!29;UBERON:0001893!6.30e-14!29;UBERON:0000956!9.33e-10!21;UBERON:0001869!9.33e-10!21;UBERON:0000203!9.33e-10!21;UBERON:0002619!3.36e-09!17;UBERON:0004111!5.72e-08!122;UBERON:0000025!6.68e-08!114;UBERON:0002021!6.32e-07!10;UBERON:0000411!6.32e-07!10;UBERON:0001950!6.32e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.15e-29,73;UBERON:0001016,8.54e-28,75;UBERON:0002346,3.29e-27,64;UBERON:0003075,3.29e-27,64;UBERON:0007284,3.29e-27,64;UBERON:0004121,7.21e-27,95;UBERON:0000924,7.21e-27,95;UBERON:0006601,7.21e-27,95;UBERON:0000073,3.39e-25,54;UBERON:0001049,8.66e-25,52;UBERON:0005068,8.66e-25,52;UBERON:0006241,8.66e-25,52;UBERON:0007135,8.66e-25,52;UBERON:0000955,1.79e-23,47;UBERON:0006238,1.79e-23,47;UBERON:0010371,8.77e-23,73;UBERON:0002616,1.03e-22,46;UBERON:0003056,1.10e-21,49;UBERON:0010314,1.47e-19,92;UBERON:0003080,3.25e-19,40;UBERON:0002780,1.68e-18,39;UBERON:0001890,1.68e-18,39;UBERON:0006240,1.68e-18,39;UBERON:0002020,2.86e-15,34;UBERON:0003528,6.30e-14,29;UBERON:0002791,6.30e-14,29;UBERON:0001893,6.30e-14,29;UBERON:0000956,9.33e-10,21;UBERON:0001869,9.33e-10,21;UBERON:0000203,9.33e-10,21;UBERON:0002619,3.36e-09,17;UBERON:0004111,5.72e-08,122;UBERON:0000025,6.67e-08,114;UBERON:0002021,6.32e-07,10;UBERON:0000411,6.32e-07,10;UBERON:0001950,6.32e-07,10
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3.8796587886149,24.1931963440835,28.8541848499967,24.6749697033181,21.5782954215713,26.7797196550088,28.7931536182433,19.9607058869361,24.853572523477,90.7545631281546,26.1653955576963,23.8260226258221,42.0014566823143,16.1449779347164,38.859908862879,49.2900402312167,36.58743214115,29.2557570947733,65.4692967438476,68.551141489372,44.8735791292013,25.1379266959804,29.4780447063054,27.0235311793814,49.7694213955598,32.7824235389087,30.5296441780721,29.68559496209,35.6411568316961,32.9975472816149,31.9619006883784,29.6271957448847,33.577932732475,47.9195298944433,36.0501309948186,14.4290869693142,9.9582380836518,8.05846158547577,53.8998967349811,54.2402354053916,65.3851298634136,33.2270987572552,39.1226241147583,115.209375893882,110.478056761722,96.2464462578186,54.6493119852927,105.502708044679,118.596841890183,99.2283075340755,119.785440057643,122.348450425735,136.170961990729,22.5218544257663,108.53476556508,75.2935201375732,63.4508531548247,34.5861718336171,24.6350301323019,46.4495661105376,51.9208344242013,49.7424774867314,45.4854981174835,55.005008076182,54.3243863191899,32.9618106293986,39.3114435765897,37.275619352193,45.247900671892,41.718357340148,38.7747533132047,51.09865169961,50.0476328456951,44.573002810104,38.5122499365762,34.5732475423615,43.0225393231692,45.6430495014353,35.7073645302875,43.9027134894654,41.5650144071792,38.0251518768413,71.8262107721905,46.979467177173,37.234694337963,55.6554218710777,33.1564840137967,46.1046800244928,56.7070011919137,58.4829021113521,51.139310863495,50.3088313341058,35.956401316481,27.3604046032097
|phase1_expression=37.7951279167314,1.39590163055744,1.81999695755814,0,0.500895729946347,2.85394762250213,3.03696432774183,33.4429407713682,4.646027831005,6.55380673701582,13.0125655851384,10.3703806693937,19.0032810223638,19.2324885321794,13.9906099962578,17.2103977281352,30.0811607595103,13.8803352757625,12.614527891728,11.8829102503448,50.005454608829,29.5887034578638,38.6575687925624,7.51964387129011,9.63518980482114,2.29692785646008,1.7230479846363,2.15471232685889,1.52018735565099,0.252030129759931,4.6563407237614,20.3209815507082,23.9875267157982,15.8481681015439,0.577703239502549,0.831173226792462,1.22501613757421,0.418531630736908,1.5626706890476,1.0470474879476,0.588231488031014,0.683045484958446,1.94204141212461,39.909291298258,37.7122184136594,47.5386088098755,76.6743517461078,62.1371695684273,58.656210790104,60.8565584102507,34.8566189847153,57.5010257459886,11.9125650300993,21.035502118329,17.1407837562657,18.2654199585522,31.5186783932632,25.2679325215947,88.4122933956442,128.015816983832,95.7085419294331,30.1571633541528,34.6824970483344,17.5480444869873,8.89979726310277,17.0515227587064,53.6284197827944,103.354724131498,41.0610864741572,52.382304072696,46.0611665359527,60.2723577092026,55.2171352379034,46.6689945008975,59.5200375023248,80.8912532216818,45.1475112097494,75.3355294702608,78.6465450271967,99.9698060994869,107.406493589229,69.8023916546058,93.5263046654626,79.9122906244986,77.9271063661731,48.9083451886288,54.5283537460564,78.6605661382768,11.510381386644,23.8806129937442,32.4648227345879,9.46466264679525,2.719885334831,2.69851595818909,1.29955283489534,1.79210754838934,27.3866619256916,33.9156341930335,31.69389256155,32.8605804294616,39.8586877968006,43.6310023208681,25.4805239706646,14.2213340630666,9.30911476348221,7.09407623330276,9.60496445528088,13.1311461676919,22.7865337609511,73.4788588370883,27.9311376093479,27.7063585264048,22.6003187310937,27.1300752994721,50.6807327754888,36.1919783029465,63.7763016754685,30.3658649531814,25.6537060065464,28.7944992906388,28.4885558813908,27.1530141755724,22.3670113461747,166.299492702559,134.255339067425,17.3710797541842,15.6957813102756,22.7963037777495,19.1876042880328,142.301107434582,188.032747758455,89.0889356480209,131.932659025938,130.159167781138,131.945408295321,133.362318241697,48.0681797373493,27.9915683872709,33.6121268716787,50.9269291245267,48.4048047821258,60.4642534660034,53.4784525521887,64.6523668515218,69.1250831377491,52.6547390370733,49.9430191903355,87.1830359390483,47.6405264381581,82.4502509531692,93.6059980552208,84.1711612521887,50.0485048606076,71.043441970522,55.3553946937368,54.5353891082671,26.6841011179029,22.9039637332097,18.7547909601091,44.1177895500619,35.8824871771077,29.7102401410675,52.7940760355019,36.2046186415223,27.6138132068407,28.1366073147993,20.6570519077707,33.5116532593776,34.2284487820039,33.1618277439772,29.9954595319666,31.2867973090211,28.5415149878366,37.4435908341437,151.198473017607,73.5767978511884,7.93005079161115,4.23120906661671,39.6716145995535,42.2670742785998,37.5004312447292,39.9333378754218,34.24621875211,23.9684288901825,8.54152310780121,13.5053142873689,26.8928673416288,24.2726895890204,30.0244694163445,16.178749355776,13.1844210423563,13.9398891278057,45.7099641296927,32.1038320433338,64.2434093336558,37.2681929956925,50.8155516379179,55.0566186139001,46.9215105461989,34.5407746272269,35.4817124921507,45.2867591593008,5.33614728756868,22.5240892716727,26.9285823305088,23.3856596880248,18.2574109249653,22.4294758569748,21.6431974014207,25.3172600956713,17.8348749452539,8.51140380883053,48.8811902193005,11.9085103253921,6.55279113540577,6.81962970457202,5.74071723270119,8.20153986317724,39.5371826956534,43.5830247072115,47.4228081446295,24.6130374374023,26.2853078083122,59.6322276492864,52.607644635809,35.7094575579772,40.3545968911849,34.7699562748577,53.5768022689157,39.8187854759243,34.5369963731791,45.7091025117577,31.6661696272472,10.8781136763742,15.7364567366092,26.7658643915591,110.619356501589,84.5096260329785,20.0000633359544,28.2767438468898,35.3369205746207,37.8725581967739,52.3478856490701,45.88200920689,57.0364605650929,36.2337959409706,42.5051236758639,55.2363571452379,51.7826989109946,169.336333754292,78.208986949756,64.6378141312136,47.5629921312442,117.953637925363,29.2039304347918,17.7229864393136,25.9998258989686,20.1807435338811,33.9597176812889,42.1186152683181,23.0001180919717,27.9920971697679,26.0243086220847,20.542389265828,17.9211634577498,21.6584640821192,113.025949110258,62.3011385348333,83.9537857750077,55.0846180031192,100.374572241527,59.2184474438874,69.6042357146972,52.6724361968257,23.2324990983073,23.9370240076117,37.9308844654535,29.0199805177005,34.8763161663156,24.2457958211187,25.5456816166712,28.7246574553857,19.8206968908299,87.1498919449396,25.9723738812736,23.9408766837338,23.3345104485837,27.1250578086755,27.065457088763,28.8260498240219,43.8544349384147,45.3442705528652,45.8823913030687,36.2774834845743,68.1704066167347,53.8796587886149,24.1931963440835,28.8541848499967,24.6749697033181,21.5782954215713,26.7797196550088,28.7931536182433,19.9607058869361,24.853572523477,90.7545631281546,26.1653955576963,23.8260226258221,42.0014566823143,16.1449779347164,38.859908862879,49.2900402312167,36.58743214115,29.2557570947733,65.4692967438476,68.551141489372,44.8735791292013,25.1379266959804,29.4780447063054,27.0235311793814,49.7694213955598,32.7824235389087,30.5296441780721,29.68559496209,35.6411568316961,32.9975472816149,31.9619006883784,29.6271957448847,33.577932732475,47.9195298944433,36.0501309948186,14.4290869693142,9.9582380836518,8.05846158547577,53.8998967349811,54.2402354053916,65.3851298634136,33.2270987572552,39.1226241147583,115.209375893882,110.478056761722,96.2464462578186,54.6493119852927,105.502708044679,118.596841890183,99.2283075340755,119.785440057643,122.348450425735,136.170961990729,22.5218544257663,108.53476556508,75.2935201375732,63.4508531548247,34.5861718336171,24.6350301323019,46.4495661105376,51.9208344242013,49.7424774867314,45.4854981174835,55.005008076182,54.3243863191899,32.9618106293986,39.3114435765897,37.275619352193,45.247900671892,41.718357340148,38.7747533132047,51.09865169961,50.0476328456951,44.573002810104,38.5122499365762,34.5732475423615,43.0225393231692,45.6430495014353,35.7073645302875,43.9027134894654,41.5650144071792,38.0251518768413,71.8262107721905,46.979467177173,37.234694337963,55.6554218710777,33.1564840137967,46.1046800244928,56.7070011919137,58.4829021113521,51.139310863495,50.3088313341058,35.956401316481,27.3604046032097
|short_description=p1@Dtx3
}}
}}

Latest revision as of 17:32, 25 September 2015

Short description:p1@Dtx3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dtx3_5end
Coexpression cluster:MCL_coexpression_mm9:1874
Association with transcript: 0bp_to_ENSMUST00000116229, ENSMUST00000125254, ENSMUST00000144322_5end
EntrezGene:Dtx3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dtx3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G737.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.44
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.55
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.01
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F110.37
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.23
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.88
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.61
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A350.01
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I938.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.64
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B91.52
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I320.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G623.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D937.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B347.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B776.67
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C262.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B858.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C360.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C434.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C457.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I921.04
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A117.14
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C388.41
Mouse Granule cells, donor2.CNhs12357.11731-123E3128.02
Mouse Granule cells, donor3.CNhs12108.11636-122C795.71
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.16
Mouse Meningeal cells, donor3.CNhs12109.11639-122D134.68
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D217.05
Mouse Microglia, donor1.CNhs12629.11718-123C853.63
Mouse Microglia, donor2.CNhs12634.11736-123E8103.35
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D541.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F552.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D946.06
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F160.27
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D555.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D246.67
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F259.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D680.89
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F375.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D778.65
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D499.97
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4107.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D869.80
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E493.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I677.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.91
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.53
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E178.66
Mouse Schwann, donor1.CNhs12507.11728-123D911.51
Mouse Schwann, donor2.CNhs12573.11746-123F923.88
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G332.46
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A727.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I733.92
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E331.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I832.86
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G639.86
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.13
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D773.48
adrenal gland, embryo E14.CNhs11038.406-44C527.93
adrenal gland, embryo E16.CNhs11004.1254-43D627.71
adrenal gland, embryo E17.CNhs11043.1263-45I122.60
adrenal gland, embryo E18.CNhs11026.1262-18F527.13
adrenal gland, neonate N00.CNhs11191.1311-23C150.68
adrenal gland, neonate N25.CNhs11223.1377-27I336.19
amnion, adult pregnant day17.5.CNhs10488.583-22A863.78
aorta, adult.CNhs10498.46-23H130.37
bone (os femoris), adult.CNhs10483.56-12G225.65
bone (os femoris), neonate N02.CNhs11227.1985-43F528.79
bone (os femoris), neonate N16.CNhs11225.1525-43A628.49
bone (os femoris), neonate N20.CNhs11195.1350-25C327.15
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B2166.30
cerebellum, neonate N30.CNhs11135.1395-42I2134.26
colon, adult.CNhs10468.36-18H717.37
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.70
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.19
corpora quadrigemina, adult.CNhs10501.16-22A4142.30
corpus striatum, adult.CNhs10487.19-21D8188.03
corpus striatum, neonate N00.CNhs11226.630-43F189.09
cortex, adult.CNhs10473.12-14D5131.93
cortex, neonate N30.CNhs11107.1392-42F2130.16
diencephalon, adult.CNhs10482.20-12F2131.95
diencephalon, neonate N30.CNhs11201.1388-42B2133.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B148.07
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.99
epididymis, adult.CNhs10490.58-23B233.61
eyeball, adult.CNhs10484.31-12G450.93
eyeball, embryo E12.CNhs11016.345-16C648.40
eyeball, embryo E14.CNhs10521.399-16E260.46
eyeball, embryo E15.CNhs10593.426-16C953.48
eyeball, embryo E17.CNhs11023.1261-18D464.65
eyeball, neonate N00.CNhs11207.633-15C669.13
eyeball, neonate N01.CNhs11140.1532-43E752.65
eyeball, neonate N02.CNhs11205.1551-44G849.94
eyeball, neonate N16.CNhs11188.777-19A287.18
forelimb, embryo E11.CNhs10596.335-25E247.64
forelimb, embryo E12.CNhs10600.359-14H282.45
forelimb, embryo E13.CNhs10589.384-1E293.61
forelimb, embryo E14.CNhs10577.413-26A884.17
forelimb, embryo E15.CNhs11007.437-20E750.05
forelimb, embryo E17.CNhs10598.1517-43C471.04
forelimb, embryo E18.CNhs11008.1520-43B555.36
gonad, embryo E13.CNhs11044.1564-45I654.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D222.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D518.75
heart, embryo E11.CNhs10586.331-24E944.12
heart, embryo E12.CNhs11015.353-12F535.88
heart, embryo E13.CNhs11013.376-3I929.71
heart, embryo E14.CNhs10597.403-26D452.79
heart, embryo E15.CNhs11017.431-16C836.20
heart, embryo E16.CNhs11021.457-17C627.61
heart, embryo E17.CNhs11025.479-18E528.14
heart, embryo E18.CNhs11030.1283-20G320.66
heart, neonate N00.CNhs11213.639-21E333.51
heart, neonate N03.CNhs11221.1349-25I234.23
heart, neonate N10.CNhs11118.749-24G133.16
heart, neonate N16.CNhs11209.782-15G130.00
heart, neonate N20.CNhs11127.821-26I631.29
heart, neonate N25.CNhs11196.1351-25D328.54
heart, neonate N30.CNhs11202.1390-42D237.44
hippocampus, adult.CNhs10478.13-16E8151.20
hippocampus, neonate N00.CNhs11228.627-43G173.58
intestinal mucosa, adult.CNhs10506.860-29I37.93
intestine, adult.CNhs10496.178-9A34.23
intestine, embryo E12.CNhs11019.1251-16I539.67
intestine, embryo E13.CNhs11010.381-16D542.27
intestine, embryo E15.CNhs10602.976-16D837.50
intestine, embryo E16.CNhs10585.463-22H439.93
intestine, embryo E17.CNhs10582.482-18D334.25
intestine, embryo E18.CNhs10526.1289-20F723.97
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E913.51
intestine, neonate N06.CNhs11102.688-20B826.89
intestine, neonate N07.CNhs11095.720-20F224.27
intestine, neonate N10.CNhs11098.755-23A530.02
intestine, neonate N20.CNhs11187.827-18D116.18
intestine, neonate N25.CNhs11121.1352-25E313.18
intestine, neonate N30.CNhs11131.1384-42G113.94
kidney, embryo E14.CNhs10606.411-4I945.71
kidney, embryo E15.CNhs10997.434-16F832.10
kidney, embryo E16.CNhs10584.464-22A564.24
kidney, embryo E17.CNhs11028.483-18I237.27
kidney, embryo E18.CNhs11001.1288-20C750.82
kidney, neonate N00.CNhs11214.646-21G755.06
kidney, neonate N10.CNhs11206.758-6D546.92
kidney, neonate N20.CNhs11113.832-19I134.54
kidney, neonate N25.CNhs11122.1353-25F335.48
kidney, neonate N30.CNhs11203.1385-42H145.29
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F822.52
liver, embryo E13.CNhs10524.378-3H626.93
liver, embryo E14.CNhs10594.409-16E123.39
liver, embryo E15.CNhs10520.433-16D718.26
liver, embryo E16.CNhs10523.462-17F522.43
liver, embryo E17.CNhs10510.481-18A321.64
liver, embryo E18.CNhs10579.499-43G425.32
liver, neonate N00.CNhs11117.641-24F417.83
liver, neonate N03.CNhs11123.1345-25G28.51
liver, neonate N06.CNhs11101.684-20A848.88
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B96.55
liver, neonate N20.CNhs11220.823-25A36.82
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B139.54
lung, embryo E12.CNhs10522.354-16G243.58
lung, embryo E14.CNhs10604.404-26F847.42
lung, embryo E15.CNhs11020.432-17C524.61
lung, embryo E16.CNhs10998.458-17B626.29
lung, embryo E17.CNhs10605.480-44A659.63
lung, embryo E18.CNhs10583.1287-20I652.61
lung, neonate N00.CNhs11224.640-42C635.71
lung, neonate N06.CNhs11212.683-20E540.35
lung, neonate N07.CNhs11111.715-19A334.77
lung, neonate N10.CNhs11219.750-23E653.58
lung, neonate N20.CNhs11109.822-18A439.82
lung, neonate N25.CNhs11119.1359-25C734.54
lung, neonate N30.CNhs11133.1394-42H245.71
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A131.67
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.88
mammary gland, adult lactating day02.CNhs10480.595-22B615.74
mammary gland, adult pregnant day19.CNhs10476.588-5H226.77
medulla oblongata, adult.CNhs10477.17-12C2110.62
medulla oblongata, neonate N30.CNhs11200.1396-42A384.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E135.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E237.87
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E352.35
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D745.88
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D857.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D936.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D555.24
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D651.78
olfactory brain, adult.CNhs10489.18-22I9169.34
ovary, adult.CNhs10507.91-2I778.21
ovary, embryo E18.CNhs11040.505-44H764.64
ovary, neonate N00.CNhs11217.1299-22I447.56
oviduct, adult pregnant day01.CNhs10500.988-6G6117.95
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F226.00
pancreas, embryo E16.CNhs11003.460-26E520.18
pancreas, embryo E17.CNhs10599.1558-45G333.96
pancreas, embryo E18.CNhs10580.1535-43I742.12
pancreas, neonate N00.CNhs11105.645-26G923.00
pancreas, neonate N01.CNhs11138.1531-43D727.99
pancreas, neonate N02.CNhs11139.1539-43D826.02
pancreas, neonate N16.CNhs11136.787-43B620.54
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G8113.03
pituitary gland, embryo E12.CNhs11018.346-16E662.30
pituitary gland, embryo E13.CNhs11009.370-44C783.95
pituitary gland, embryo E14.CNhs11037.398-44A555.08
pituitary gland, embryo E15.CNhs10592.427-16B9100.37
pituitary gland, embryo E16.CNhs11036.449-43F659.22
pituitary gland, embryo E17.CNhs11039.1265-44F569.60
pituitary gland, neonate N00.CNhs11190.1308-22E952.67
placenta, adult pregnant day10.CNhs10472.539-13I723.23
placenta, adult pregnant day17.CNhs10464.577-18G323.94
prostate, adult.CNhs10470.859-1F837.93
skin, adult.CNhs10492.30-1C329.02
skin, neonate N00.CNhs11124.650-25G434.88
skin, neonate N03.CNhs11215.662-22H324.25
skin, neonate N06.CNhs11097.693-20I525.55
skin, neonate N10.CNhs11108.762-6C428.72
small intestine, neonate N16.CNhs11114.790-21I119.82
spinal cord, adult.CNhs10505.24-13C987.15
spleen, adult.CNhs10465.25-2G225.97
spleen, embryo E16.CNhs11035.461-43C123.94
spleen, embryo E18.CNhs11011.1271-21F223.33
spleen, neonate N10.CNhs11116.752-24D127.13
spleen, neonate N20.CNhs11112.824-19H127.07
spleen, neonate N25.CNhs11099.1354-25G328.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C643.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C945.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D345.88
stomach, adult.CNhs10503.33-1H636.28
stomach, embryo E12.CNhs10588.356-43E368.17
stomach, embryo E15.CNhs10603.1252-16G853.88
stomach, embryo E16.CNhs11022.459-17D424.19
stomach, embryo E17.CNhs11006.1035-18D528.85
stomach, embryo E18.CNhs10999.1286-20C624.67
stomach, neonate N03.CNhs11193.1340-24B821.58
stomach, neonate N07.CNhs11210.718-18A926.78
stomach, neonate N25.CNhs11104.1355-25E428.79
stomach, neonate N30.CNhs11134.1386-42I119.96
submandibular gland, adult.CNhs10469.59-29C124.85
testis, adult.CNhs10504.57-7G590.75
testis, embryo E13.CNhs11031.389-23F526.17
testis, embryo E15.CNhs11034.443-27C523.83
testis, embryo E16.CNhs11033.470-26G542.00
testis, embryo E17.CNhs11029.486-18I516.14
testis, embryo E18.CNhs11027.503-18G538.86
testis, neonate N00.CNhs11189.1300-22B749.29
testis, neonate N07.CNhs11222.726-26I436.59
testis, neonate N10.CNhs11204.763-44D929.26
testis, neonate N20.CNhs11110.839-18H365.47
testis, neonate N30.CNhs11130.1391-42E268.55
thymus, adult.CNhs10471.38-12B544.87
thymus, embryo E14.CNhs11041.402-44I425.14
thymus, embryo E15.CNhs11005.430-45I229.48
thymus, embryo E16.CNhs11002.456-26C527.02
thymus, embryo E17.CNhs10581.478-18C149.77
thymus, embryo E18.CNhs10595.1273-19G432.78
thymus, neonate N02.CNhs11181.1541-43F830.53
thymus, neonate N03.CNhs11137.2104-43C729.69
thymus, neonate N06.CNhs11197.681-26C435.64
thymus, neonate N07.CNhs11211.713-19D333.00
thymus, neonate N10.CNhs11194.748-24E431.96
thymus, neonate N20.CNhs11186.820-7A229.63
thymus, neonate N25.CNhs11125.1362-25G733.58
thymus, neonate N30.CNhs11132.1393-42G247.92
tongue, adult.CNhs10499.32-1B436.05
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H314.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.06
urinary bladder, adult.CNhs10481.879-12E453.90
uterus, adult pregnant day19.CNhs10497.590-15F554.24
uterus, adult.CNhs10509.92-27E565.39
vagina, adult.CNhs10502.89-27D533.23
vesicular gland, adult.CNhs10491.51-27F839.12
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1115.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2110.48
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A396.25
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D754.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4105.50
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5118.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A699.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7119.79
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8122.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9136.17
whole body, embryo E11.CNhs11014.324-5I822.52
whole body, embryo E12.CNhs10587.857-27C9108.53
whole body, embryo E13.CNhs10512.372-23H275.29
whole body, embryo E14.5.CNhs10578.420-27D263.45
whole body, embryo E14.CNhs10519.395-14B134.59
whole body, embryo E16.CNhs10514.453-14F224.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G546.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G551.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G549.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G545.49
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G555.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G532.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G539.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.28
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G545.25
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G541.72
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G538.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G551.10
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G550.05
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G544.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G538.51
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.57
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G543.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G545.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G543.90
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G541.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G538.03
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G571.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G546.98
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G555.66
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.16
whole body, embryo E17.5.CNhs10513.490-9F946.10
whole body, embryo E17.CNhs10517.475-3I556.71
whole body, embryo E18.CNhs10516.493-3B358.48
whole body, neonate N00.CNhs10525.657-19C251.14
whole body, neonate N01.CNhs10576.659-23C650.31
whole body, neonate N06.CNhs10515.692-21D135.96
whole body, neonate N10.CNhs10518.761-6B427.36





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell8.16e-1043
ectodermal cell8.71e-1044
neurectodermal cell8.71e-1044
neuron6.50e-0933
neuronal stem cell6.50e-0933
neuroblast6.50e-0933
electrically signaling cell6.50e-0933
CNS neuron (sensu Vertebrata)1.09e-0823
neuroblast (sensu Vertebrata)1.09e-0823
electrically responsive cell1.42e-0739
electrically active cell1.42e-0739

Uber anatomy
Ontology termp-valuen
central nervous system1.15e-2973
nervous system8.54e-2875
neurectoderm3.29e-2764
neural plate3.29e-2764
presumptive neural plate3.29e-2764
ectoderm-derived structure7.21e-2795
ectoderm7.21e-2795
presumptive ectoderm7.21e-2795
regional part of nervous system3.39e-2554
neural tube8.66e-2552
neural rod8.66e-2552
future spinal cord8.66e-2552
neural keel8.66e-2552
brain1.79e-2347
future brain1.79e-2347
ecto-epithelium8.77e-2373
regional part of brain1.03e-2246
pre-chordal neural plate1.10e-2149
structure with developmental contribution from neural crest1.47e-1992
anterior neural tube3.25e-1940
regional part of forebrain1.68e-1839
forebrain1.68e-1839
future forebrain1.68e-1839
gray matter2.86e-1534
brain grey matter6.30e-1429
regional part of telencephalon6.30e-1429
telencephalon6.30e-1429
cerebral cortex9.33e-1021
cerebral hemisphere9.33e-1021
pallium9.33e-1021
regional part of cerebral cortex3.36e-0917
anatomical conduit5.72e-08122
tube6.67e-08114
occipital lobe6.32e-0710
visual cortex6.32e-0710
neocortex6.32e-0710
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