FFCP PHASE1:Mm9::chr14:12386216..12386287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19270 | |EntrezGene=19270 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=121bp_to_ENSMUST00000148113_5end | |association_with_transcript=121bp_to_ENSMUST00000148113_5end | ||
|cluster_id=chr14:12386216..12386287,+ | |||
|description=CAGE_peak_5_at_Ptprg_5end | |description=CAGE_peak_5_at_Ptprg_5end | ||
|id=chr14:12386216..12386287,+ | |id=chr14:12386216..12386287,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.98e-10!50;CL:0000221!2.01e-09!44;CL:0000133!2.01e-09!44;CL:0002319!2.37e-09!43;CL:0000393!8.87e-09!39;CL:0000211!8.87e-09!39;CL:0000540!6.26e-08!33;CL:0000047!6.26e-08!33;CL:0000031!6.26e-08!33;CL:0000404!6.26e-08!33;CL:0000117!9.79e-08!23;CL:0000337!9.79e-08!23 | |ontology_enrichment_celltype=CL:0000055!8.98e-10!50;CL:0000221!2.01e-09!44;CL:0000133!2.01e-09!44;CL:0002319!2.37e-09!43;CL:0000393!8.87e-09!39;CL:0000211!8.87e-09!39;CL:0000540!6.26e-08!33;CL:0000047!6.26e-08!33;CL:0000031!6.26e-08!33;CL:0000404!6.26e-08!33;CL:0000117!9.79e-08!23;CL:0000337!9.79e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.48e-09,44;CL:0000133,2.48e-09,44;CL:0002319,2.94e-09,43;CL:0000393,6.38e-09,39;CL:0000211,6.38e-09,39;CL:0000540,4.67e-08,33;CL:0000047,4.67e-08,33;CL:0000031,4.67e-08,33;CL:0000404,4.67e-08,33;CL:0000117,7.38e-08,23;CL:0000337,7.38e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.55e-23!73;UBERON:0005743!9.55e-23!73;UBERON:0000073!2.72e-21!75;UBERON:0001016!2.72e-21!75;UBERON:0004121!1.64e-18!102;UBERON:0000924!1.64e-18!102;UBERON:0006601!1.64e-18!102;UBERON:0001049!3.18e-18!52;UBERON:0005068!3.18e-18!52;UBERON:0006241!3.18e-18!52;UBERON:0007135!3.18e-18!52;UBERON:0002346!1.09e-17!71;UBERON:0003075!1.09e-17!71;UBERON:0007284!1.09e-17!71;UBERON:0000033!3.67e-16!63;UBERON:0000955!8.68e-16!50;UBERON:0006238!8.68e-16!50;UBERON:0002616!3.36e-15!49;UBERON:0003056!5.54e-13!49;UBERON:0003080!2.71e-12!40;UBERON:0002020!9.77e-12!34;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0000025!4.77e-11!114;UBERON:0000468!6.36e-11!333;UBERON:0004111!1.68e-10!122;UBERON:0002791!8.94e-09!29;UBERON:0003528!8.94e-09!29;UBERON:0001893!8.94e-09!29;UBERON:0000153!1.51e-08!94;UBERON:0000922!3.80e-08!328;UBERON:0000479!2.33e-07!349;UBERON:0000956!5.33e-07!21;UBERON:0001869!5.33e-07!21;UBERON:0000203!5.33e-07!21;UBERON:0003076!5.71e-07!12;UBERON:0003057!5.71e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!9.55e-23!73;UBERON:0005743!9.55e-23!73;UBERON:0000073!2.72e-21!75;UBERON:0001016!2.72e-21!75;UBERON:0004121!1.64e-18!102;UBERON:0000924!1.64e-18!102;UBERON:0006601!1.64e-18!102;UBERON:0001049!3.18e-18!52;UBERON:0005068!3.18e-18!52;UBERON:0006241!3.18e-18!52;UBERON:0007135!3.18e-18!52;UBERON:0002346!1.09e-17!71;UBERON:0003075!1.09e-17!71;UBERON:0007284!1.09e-17!71;UBERON:0000033!3.67e-16!63;UBERON:0000955!8.68e-16!50;UBERON:0006238!8.68e-16!50;UBERON:0002616!3.36e-15!49;UBERON:0003056!5.54e-13!49;UBERON:0003080!2.71e-12!40;UBERON:0002020!9.77e-12!34;UBERON:0002780!1.00e-11!39;UBERON:0001890!1.00e-11!39;UBERON:0006240!1.00e-11!39;UBERON:0000025!4.77e-11!114;UBERON:0000468!6.36e-11!333;UBERON:0004111!1.68e-10!122;UBERON:0002791!8.94e-09!29;UBERON:0003528!8.94e-09!29;UBERON:0001893!8.94e-09!29;UBERON:0000153!1.51e-08!94;UBERON:0000922!3.80e-08!328;UBERON:0000479!2.33e-07!349;UBERON:0000956!5.33e-07!21;UBERON:0001869!5.33e-07!21;UBERON:0000203!5.33e-07!21;UBERON:0003076!5.71e-07!12;UBERON:0003057!5.71e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.63e-23,73;UBERON:0001016,2.27e-21,75;UBERON:0002346,2.19e-19,64;UBERON:0003075,2.19e-19,64;UBERON:0007284,2.19e-19,64;UBERON:0004121,3.69e-19,95;UBERON:0000924,3.69e-19,95;UBERON:0006601,3.69e-19,95;UBERON:0000073,9.32e-19,54;UBERON:0001049,1.48e-18,52;UBERON:0005068,1.48e-18,52;UBERON:0006241,1.48e-18,52;UBERON:0007135,1.48e-18,52;UBERON:0010371,1.85e-17,73;UBERON:0000955,3.30e-15,47;UBERON:0006238,3.30e-15,47;UBERON:0010314,9.70e-15,92;UBERON:0002616,1.29e-14,46;UBERON:0003056,3.29e-13,49;UBERON:0003080,1.66e-12,40;UBERON:0002020,6.14e-12,34;UBERON:0002780,6.29e-12,39;UBERON:0001890,6.29e-12,39;UBERON:0006240,6.29e-12,39;UBERON:0000025,2.62e-10,114;UBERON:0004111,1.04e-09,122;UBERON:0003528,6.43e-09,29;UBERON:0002791,6.43e-09,29;UBERON:0001893,6.43e-09,29;UBERON:0000956,4.15e-07,21;UBERON:0001869,4.15e-07,21;UBERON:0000203,4.15e-07,21;UBERON:0003076,4.46e-07,12;UBERON:0003057,4.46e-07,12;UBERON:0000922,4.81e-07,320 | |||
|phase1_expression=6.72625157840135,0.697950815278722,0.454999239389536,0.60492842261366,0.500895729946347,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0.319984845586813,0.22940928106717,0,0.430761996159075,0.430942465371778,0.380046838912748,0.252030129759931,0.886922042621219,0,0,0,0.866554859253824,0.166234645358492,1.02084678131185,0,0,0,0,0,0,8.3091899863881,8.61703915365874,4.22157529971868,4.69434806608824,3.70642765846759,7.90870257844099,10.6936444490856,5.73944328663986,7.18762821824858,0,0,0,4.63066984864705,2.0057340795713,1.54701627683233,5.26022798234954,4.7609188134483,5.70448263155561,2.71075625655306,2.66788438833342,0,0,0,3.29560121570245,4.99483796918021,5.59923906465779,4.18518408828241,6.09942387919008,12.5686433137674,6.40518768759679,1.71487118900936,2.68367318851062,4.5960939330501,5.50579404996943,4.46905683298157,4.14737639791857,4.74790635828698,4.84884511092771,5.2091337055676,3.62937898701795,5.06486349028512,3.66715794664344,14.7314292736834,16.657486653495,9.50637173709033,0.908714319998209,0.377857800533928,6.95674772884027,0.860423876981386,0,1.07940638327563,1.29955283489534,0,0.561777680527007,1.53387290320252,1.55871602761721,0.70667914902068,3.66192891419369,0,2.54805239706646,7.11066703153331,0,1.26679932737549,1.01104889002957,1.25602267690966,1.29468941823586,4.15637989381509,1.90833859442749,2.43572382649713,1.84492397804847,1.20578112442098,5.05631440683531,1.25666591329675,2.22475470960936,5.35017620603673,0,2.91180329905337,1.10420759230197,0.969750506270444,3.72783522436244,4.9772735491963,7.95897485891129,1.02182822083437,0,0,0,8.23848516726525,6.8625090422794,3.64397621127307,6.95297280769106,6.39288643325826,8.10373373782284,8.59878694259116,3.86989582631202,1.99051152976149,0.758168275301024,1.05220927943237,7.67710613479952,5.74755261083682,5.04173963454978,3.0140963567143,5.44291993210623,2.69038812598185,3.09215691047105,3.10444044886819,5.38919982332106,6.99692496620931,11.4368230706567,8.32943783224784,7.78532297831674,5.57203466435466,3.2925141825271,5.37392520409932,0,0,0,2.48550927042602,2.34526059981096,1.62055855314913,2.3674473558521,1.37734962223183,1.3884040159864,2.32533944750408,0.804820204198858,3.15266424391358,1.81015834904829,2.79084688934462,2.91847714365081,2.48539978623065,1.53685080703735,2.81833479396781,7.14985825118033,8.84979666461846,0.991256348951394,0.793351699990633,4.05247676016945,4.64473343720877,3.35055399437443,2.42020229548011,2.89091456998331,0.570676878337677,3.32170343081158,1.97638745668813,1.75934646160189,2.18852119245266,2.53453313254856,4.49409704327111,1.08069024937347,1.7922714592893,4.36236172192088,3.54170389090159,4.50830942692322,3.86937522906097,3.68509725618489,5.11991485199326,3.73095569033118,2.21415221969403,1.41298855057237,2.59134044235781,1.48226313543574,0.83422552858047,1.57247196090562,0.674586337154561,0.405720242777006,0.241177159752417,0.763877555344259,1.15078454980324,2.10775794807546,0.274561413188081,2.87536413054709,1.11642284300551,0.624075346229121,0.252578877947112,0.717589654087649,0.482443521363367,5.72734889516475,1.89491411770485,3.25929952884052,5.09235257325564,3.52035372432753,4.85768146581266,3.09456733151818,4.68320754858717,6.46304090835383,7.9727288273559,6.69710028361446,5.73521601505083,4.83517949224508,8.24499633914616,0,0,0.491764273019036,2.20749397043786,5.61927064957272,5.39173758324135,0.327869890753351,2.01976741763498,3.78609863299508,2.73307121007647,3.87762115919038,2.86762557543062,2.00518806674155,1.98153571552183,3.23848561339915,7.89090816360542,3.55759000151871,8.03303291054518,4.9679029822894,3.91744328067962,3.90928702448583,3.62934270539578,1.32745138339963,1.94224508923985,2.11626489875326,1.32023555829129,1.18120757152309,1.53717573971964,1.80899805217755,3.27180356529755,2.13898427030833,1.58018378967908,0,1.03135543248187,2.04263763452273,9.18311579559682,4.65691261617916,3.85806663056866,4.25616560741457,6.59964625127661,5.10101963866575,4.26250928760439,3.28540391289194,1.0591603543191,1.7642271844397,1.6488625294148,3.87514624070173,1.44751019827574,1.67121281604391,1.64140899745061,2.62332752966866,10.198391610578,0.683483523191411,3.714963623338,2.77791791054568,0.565105371014073,0.27338845544205,0.228778173206523,0,0,0,0,3.63786392618306,4.67634774391752,3.78018692876304,2.29997125615916,3.27543845619266,2.29269388854195,3.30613822901344,1.83229159388821,1.29614973291793,0.621339313086926,0,4.03694674318743,2.81279433777066,3.88902376688095,4.26227417476513,4.39285926276023,4.3422178298929,2.99470085141085,4.40409246587986,1.20792060413003,0.864090018773596,0.948033361884535,2.8381530140623,2.77319584345034,1.55904987573354,0.716106782669926,0.596044064343795,0.721172697119813,0.590758108698309,0.807731599585181,0.228620419965,0.302478555410522,0.292373642219257,0.481059208201647,0.467507608726276,2.0405734525369,0.221985953374065,0.0897138566094757,0,1.35232715822533,1.87682475451182,2.38097111547445,1.5005786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| ||
|short_description=p5@Ptprg | |short_description=p5@Ptprg | ||
}} | }} |
Latest revision as of 17:26, 25 September 2015
Short description: | p5@Ptprg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ptprg_5end |
Coexpression cluster: | NA |
Association with transcript: | 121bp_to_ENSMUST00000148113_5end |
EntrezGene: | Ptprg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.48e-09 | 44 |
neurectodermal cell | 2.48e-09 | 44 |
neural cell | 2.94e-09 | 43 |
electrically responsive cell | 6.38e-09 | 39 |
electrically active cell | 6.38e-09 | 39 |
neuron | 4.67e-08 | 33 |
neuronal stem cell | 4.67e-08 | 33 |
neuroblast | 4.67e-08 | 33 |
electrically signaling cell | 4.67e-08 | 33 |
CNS neuron (sensu Vertebrata) | 7.38e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.38e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.63e-23 | 73 |
nervous system | 2.27e-21 | 75 |
neurectoderm | 2.19e-19 | 64 |
neural plate | 2.19e-19 | 64 |
presumptive neural plate | 2.19e-19 | 64 |
ectoderm-derived structure | 3.69e-19 | 95 |
ectoderm | 3.69e-19 | 95 |
presumptive ectoderm | 3.69e-19 | 95 |
regional part of nervous system | 9.32e-19 | 54 |
neural tube | 1.48e-18 | 52 |
neural rod | 1.48e-18 | 52 |
future spinal cord | 1.48e-18 | 52 |
neural keel | 1.48e-18 | 52 |
ecto-epithelium | 1.85e-17 | 73 |
brain | 3.30e-15 | 47 |
future brain | 3.30e-15 | 47 |
structure with developmental contribution from neural crest | 9.70e-15 | 92 |
regional part of brain | 1.29e-14 | 46 |
pre-chordal neural plate | 3.29e-13 | 49 |
anterior neural tube | 1.66e-12 | 40 |
gray matter | 6.14e-12 | 34 |
regional part of forebrain | 6.29e-12 | 39 |
forebrain | 6.29e-12 | 39 |
future forebrain | 6.29e-12 | 39 |
tube | 2.62e-10 | 114 |
anatomical conduit | 1.04e-09 | 122 |
brain grey matter | 6.43e-09 | 29 |
regional part of telencephalon | 6.43e-09 | 29 |
telencephalon | 6.43e-09 | 29 |
cerebral cortex | 4.15e-07 | 21 |
cerebral hemisphere | 4.15e-07 | 21 |
pallium | 4.15e-07 | 21 |
posterior neural tube | 4.46e-07 | 12 |
chordal neural plate | 4.46e-07 | 12 |
embryo | 4.81e-07 | 320 |