FFCP PHASE1:Mm9::chr16:65815522..65815531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73569 | |EntrezGene=73569 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=148 | |MCL_coexpression_id=148 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q1Y1,P85442 | |UniProt=E9Q1Y1,P85442 | ||
|association_with_transcript=-346bp_to_ENSMUST00000168064,NM_028572,uc007zqk.2_5end | |association_with_transcript=-346bp_to_ENSMUST00000168064,NM_028572,uc007zqk.2_5end | ||
|cluster_id=chr16:65815522..65815531,+ | |||
|description=CAGE_peak_7_at_Vgll3_5end | |description=CAGE_peak_7_at_Vgll3_5end | ||
|id=chr16:65815522..65815531,+ | |id=chr16:65815522..65815531,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.02e-09!50;CL:0000107!4.93e-08!9;CL:0000221!6.03e-07!44;CL:0000133!6.03e-07!44 | |ontology_enrichment_celltype=CL:0000055!6.02e-09!50;CL:0000107!4.93e-08!9;CL:0000221!6.03e-07!44;CL:0000133!6.03e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.70e-15,9;CL:0002453,3.53e-13,8;CL:0000128,9.21e-13,6;CL:0000126,9.21e-13,6;CL:0000127,9.21e-13,6;CL:0002319,1.70e-10,43;CL:0000333,2.11e-10,10;CL:0000095,2.11e-10,10;CL:0000243,2.11e-10,10;CL:0000123,2.11e-10,10;CL:0000125,2.11e-10,10;CL:0000030,2.11e-10,10;CL:0000339,2.11e-10,10;CL:0000221,3.45e-10,44;CL:0000133,3.45e-10,44;CL:0002494,8.71e-10,3;CL:0000737,8.71e-10,3;CL:0000746,8.71e-10,3;CL:0000513,8.71e-10,3;CL:0002321,1.42e-08,70;CL:0002605,1.57e-07,2;CL:0002604,1.57e-07,2;CL:0000393,5.68e-07,39;CL:0000211,5.68e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!7.53e-09!11;UBERON:0002410!4.93e-08!9 | |ontology_enrichment_uberon=UBERON:0000010!7.53e-09!11;UBERON:0002410!4.93e-08!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.70e-15,9;UBERON:0000010,3.19e-12,11;UBERON:0010313,5.44e-10,3;UBERON:0002342,5.44e-10,3;UBERON:0002005,5.44e-10,3;UBERON:0005428,5.44e-10,3;UBERON:0005062,5.44e-10,3;UBERON:0000011,7.91e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0.183546752161682,0,3.92445281484804,5.4921545683618,10.304784650937,1.25987779462826,1.43752564364972,0,0,0,4.88792928468299,1.43266719969378,2.06268836910977,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0,0,0.7104801149461,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0.558365998002762,1.12552522006336,0.15279824777681,0.294628585473668,0.569486723196412,0.559198337475902,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0.229902104433473,0.900310649026746,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.703804496655795,0.657587197282725,0,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,1.47541450839008,0,1.89304931649754,2.73307121007647,2.15423397732799,1.43381278771531,1.11399337041197,1.41538265394416,0.809621403349789,1.46127928955656,0.790575555893047,0,0.425820255624806,0,0.325773918707152,0,0,0.485561272309963,0,0,0,0,1.03371317267288,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,1.69465656691056,0,2.30840754118072,1.13025098687134,0.904693873922338,0.477489376012546,0.656563598980245,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,1.10992976687032,0.179427713218951,1.17519231454855,0.386379188064381,1.68914227906064,0,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,1.19707462020309,1.19513524027894,0.486213434136588,0.419226325255965,0,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.0574354689556133,0,0,0,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,1.15743966588685,0.249810577937946,0.467863216890817,0,1.14772999241306,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.709638518536602,0.183546752161682,0,3.92445281484804,5.4921545683618,10.304784650937,1.25987779462826,1.43752564364972,0,0,0,4.88792928468299,1.43266719969378,2.06268836910977,0,0.528990979272033,0,1.0165335962074,1.77858959222228,0,0,0.7104801149461,1.19840044207362,0,0,0,0,0,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.182975287204819,0,0.558365998002762,1.12552522006336,0.15279824777681,0.294628585473668,0.569486723196412,0.559198337475902,0.454357159999104,0.68014404096107,0,0,0,0,0,0,0,0.340860645156116,0.519572009205738,0.70667914902068,0.422530259330042,0,0,0,0,0,0.505524445014783,0,0,0,0,0,0,0,0.23517741427141,0,0.741584903203122,0.289198713839823,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0.299581278809645,0,0.125654352112864,0,0,0,0.162241263067758,0,0.248813941220186,0,0,0,0.229902104433473,0.900310649026746,0,0.0680364991513279,0,0,0,0,0.189106080167819,0.703804496655795,0.657587197282725,0,0.696504333044333,1.02891068203972,0,0,0,0,0,0,0.180062061461015,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0.292399974850665,0.219550115291051,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0.203651327845314,0,0,0.126473074248515,0.442830443938806,0,0.123397163921801,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0,0.714130922658041,0.585400943573396,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,1.47541450839008,0,1.89304931649754,2.73307121007647,2.15423397732799,1.43381278771531,1.11399337041197,1.41538265394416,0.809621403349789,1.46127928955656,0.790575555893047,0,0.425820255624806,0,0.325773918707152,0,0,0.485561272309963,0,0,0,0,1.03371317267288,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,1.69465656691056,0,2.30840754118072,1.13025098687134,0.904693873922338,0.477489376012546,0.656563598980245,0,0.556275906031529,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0.404593039154462,0,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.330916980914195,0.388902376688095,0.387479470433193,0.168956125490778,0.117357238645754,0.13020438484395,0.209718688851422,0,0,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,1.10992976687032,0.179427713218951,1.17519231454855,0.386379188064381,1.68914227906064,0,0,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0,0,0.207574695168353,1.19707462020309,1.19513524027894,0.486213434136588,0.419226325255965,0,0.666740183404846,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.280924522409647,0.512201219238954,0.0574354689556133,0,0,0,0.824171801606613,0.294397840268795,0.342869252385415,0.354951612318675,0.238436189947321,0.581385666529314,0.564656282491984,0.338458431566706,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.197008964751127,0,0,1.15743966588685,0.249810577937946,0.467863216890817,0,1.14772999241306,0.220591419119515,0 | ||
|short_description=p7@Vgll3 | |short_description=p7@Vgll3 | ||
}} | }} |
Latest revision as of 17:17, 25 September 2015
Short description: | p7@Vgll3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Vgll3_5end |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | -346bp_to_ENSMUST00000168064, NM_028572, uc007zqk.2_5end |
EntrezGene: | Vgll3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.70e-15 | 9 |
oligodendrocyte precursor cell | 3.53e-13 | 8 |
oligodendrocyte | 9.21e-13 | 6 |
macroglial cell | 9.21e-13 | 6 |
astrocyte | 9.21e-13 | 6 |
neural cell | 1.70e-10 | 43 |
migratory neural crest cell | 2.11e-10 | 10 |
neuron associated cell | 2.11e-10 | 10 |
glial cell (sensu Vertebrata) | 2.11e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 2.11e-10 | 10 |
glial cell | 2.11e-10 | 10 |
glioblast | 2.11e-10 | 10 |
glioblast (sensu Vertebrata) | 2.11e-10 | 10 |
ectodermal cell | 3.45e-10 | 44 |
neurectodermal cell | 3.45e-10 | 44 |
cardiocyte | 8.71e-10 | 3 |
striated muscle cell | 8.71e-10 | 3 |
cardiac muscle cell | 8.71e-10 | 3 |
cardiac muscle myoblast | 8.71e-10 | 3 |
embryonic cell | 1.42e-08 | 70 |
astrocyte of the cerebral cortex | 1.57e-07 | 2 |
astrocyte of the hippocampus | 1.57e-07 | 2 |
electrically responsive cell | 5.68e-07 | 39 |
electrically active cell | 5.68e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.70e-15 | 9 |
peripheral nervous system | 3.19e-12 | 11 |
neural crest-derived structure | 5.44e-10 | 3 |
neural crest | 5.44e-10 | 3 |
enteric nervous system | 5.44e-10 | 3 |
vagal neural crest | 5.44e-10 | 3 |
neural fold | 5.44e-10 | 3 |
parasympathetic nervous system | 7.91e-09 | 3 |