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FFCP PHASE1:Mm9::chr10:126338371..126338452,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=68876
|EntrezGene=68876
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9CWQ3,G3UW46
|UniProt=Q9CWQ3,G3UW46
|association_with_transcript=0bp_to_ENSMUST00000026504,ENSMUST00000168520,NM_001159559,NM_026858,uc007hhf.2,uc007hhg.2,uc007hhh.2_5end
|association_with_transcript=0bp_to_ENSMUST00000026504,ENSMUST00000168520,NM_001159559,NM_026858,uc007hhf.2,uc007hhg.2,uc007hhh.2_5end
|cluster_id=chr10:126338371..126338452,-
|description=CAGE_peak_1_at_Xrcc6bp1_5end
|description=CAGE_peak_1_at_Xrcc6bp1_5end
|id=chr10:126338371..126338452,-
|id=chr10:126338371..126338452,-
|ontology_enrichment_celltype=CL:0000723!1.28e-12!91;CL:0000048!1.28e-12!91;CL:0000034!3.85e-12!97;CL:0000548!5.27e-10!115;CL:0000004!5.27e-10!115;CL:0000255!5.27e-10!115;CL:0002320!2.70e-09!46;CL:0000134!2.70e-09!46;CL:0002371!8.46e-09!118;CL:0000144!2.51e-08!121;CL:0000012!2.51e-08!121;CL:0000063!5.26e-08!66;CL:0000117!9.52e-07!23;CL:0000337!9.52e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000723,1.26e-12,91;CL:0000048,1.26e-12,91;CL:0000034,3.78e-12,97;CL:0002320,2.65e-09,46;CL:0000134,2.65e-09,46;CL:0000117,9.52e-07,23;CL:0000337,9.52e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!2.70e-09!46
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-09,46
|phase1_expression=8.96833543786846,1.39590163055744,2.72999543633722,1.51232105653415,1.00179145989269,6.5472916045637,4.90586545250604,8.00564605337773,9.57363310631334,10.5329036844897,14.0398733944914,19.5441789538574,7.19043065711064,9.26656265641372,7.32841475994458,3.84703008040669,3.49780939064073,9.14840279538889,8.77532375076728,12.3072999021429,5.27268398936633,12.9078236561151,10.4479915655574,4.47978783821539,4.35877634027623,3.44539178469012,3.87685796543167,5.17130958446134,4.75058548640935,4.28451220591882,5.98672378769323,17.14582818341,16.6067492647834,0,13.8648777480612,17.2884031172832,11.8418226632174,0.837063261473815,5.4693474116666,0,0.588231488031014,0.683045484958446,0.971020706062307,10.3235390739973,10.9487085717076,8.9937908559224,3.9119567217402,5.23260375313072,5.27246838562732,5.24960727500565,4.61955191363696,10.062679505548,4.69791296961662,6.5282592781021,4.7053131879945,3.08711323243136,2.86533439938757,4.64104883049698,8.09265843438391,6.87688273053643,12.6766280701236,6.77689064138264,4.4464739805557,7.64914759689189,8.89979726310277,10.6572017241915,6.89080254192331,7.68436610643109,5.39185984004084,5.94026128659439,6.94072372459561,15.4251531578054,14.5773237028065,4.65465037016825,3.83381884072945,11.0306254393203,12.1127469099328,10.9811110753261,10.1380311949121,8.17694983927202,7.41049913179518,14.0646610050325,12.0048689570594,19.6966913511088,11.7654650788144,12.0797720044204,10.3931326983345,12.3023634244698,3.86203585999239,2.79614772395106,5.2175607966302,8.60423876981386,8.15965600449301,10.2543606411185,7.14754059192436,11.6486990645307,6.60088774619234,10.7371103224176,11.6903702071291,15.1936017039446,8.16891834704747,14.115912515575,7.64415719119937,21.3320010945999,6.71122227134764,7.09407623330276,6.57181778519218,4.5673551887624,9.32176381129818,4.60170631100957,5.55153045651635,4.26251669636998,6.22661842591358,6.0289056221049,7.4080885495494,4.52399728786832,1.97755974187499,5.78397427679647,4.42305275974937,5.98537344805414,1.98757366614354,5.33362778448744,7.45567044872489,11.1256702864388,6.28340120440365,2.81002760729451,6.94927722134338,16.7972764678154,6.86179226194549,12.1330417917906,8.23501085073528,4.77486538028885,7.82209440865244,8.95004100656157,7.06479351502504,9.73447578406546,6.31404055871961,3.11017426525233,4.54900965180614,3.15662783829711,8.84819012146385,8.73627996847197,6.48223667299257,6.93242162044289,4.83059143974428,5.63700369253339,7.21503279109912,3.10444044886819,7.54487975264948,7.37513712654495,7.74184946321375,6.35667624039967,10.5657954705727,7.3132954969655,5.35033554660653,7.36426787228425,11.937624184325,11.5806558201622,16.4814829649444,5.59239585845855,2.81431271977315,5.04173772090842,3.78791576936336,4.32881309844288,6.17068451549513,3.95307706075693,3.75582761959467,2.91913355917924,5.10135534731789,4.26835406605648,3.72916523910936,4.5321996101853,6.14740322814942,4.83143107537338,7.36014819974445,9.98174740079059,1.65209391491899,4.7601101999438,8.31824177087412,7.19933682767359,8.76298736990235,5.04208811558356,5.11469500843202,5.51654315726422,3.79623249235609,4.11747386810027,3.77002813200404,2.98434708061726,6.43381487493096,6.29173586057955,5.18731319699266,5.37681437786791,7.58671603812327,7.19765629441292,6.76246414038483,8.75700709734851,6.98228953803453,5.40045813155453,5.50157872981038,6.05201606716369,4.55296310739987,5.79966670432462,13.933273473096,6.17326891149548,6.2898878436225,6.74586337154561,3.65148218499305,5.788251834058,6.62027214631691,4.31544206176216,2.7562988551756,4.3929826110093,2.87536413054709,2.97712758134803,5.92871578917665,6.56705082662491,5.9201146462231,6.75420929908714,4.24932337383191,9.47457058852424,6.84452901056509,6.11082308790677,6.10194645550105,4.35516269348721,3.57065461329021,1.17080188714679,4.25614889086716,3.5434350343804,4.62418829106713,3.93271955317771,2.59027472798843,2.89298117163023,13.5712155545345,6.52686820582452,4.42587845717133,4.69092468718045,10.2752377592187,8.90808818100744,7.86887737808042,5.04941854408746,6.62567260774139,5.0757036758563,4.52389135238878,5.25731355495614,6.23836287430704,4.81230102341015,6.8817819284732,4.09158201075837,5.53402889125133,7.39039027770156,6.10342366395555,8.72521457969551,7.81857404897165,6.43383479592888,3.98235415019888,8.49732226542435,9.97667737983678,6.22396763194464,5.61073596473468,6.45613810682248,5.42699415653264,7.27067458955011,5.70395805415554,5.05658812697306,2.10837217149998,6.18813259489121,5.7874732978144,6.12207719706455,4.78627129996192,4.71541477069503,3.3694644392032,3.74574516964348,6.41741180348272,3.34911444026059,2.3467170806371,2.1183207086382,4.19003956304428,3.13283880588812,3.87514624070173,5.48847616846218,3.58117032009409,5.74493149107714,3.20628920292836,9.6421157045465,5.98048082792484,5.77883230297023,6.2966139305702,3.39063222608444,3.14396723758358,3.43167259809784,5.60928818979723,5.318155188299,4.97519905695926,2.86401185404534,8.54107182669065,6.91286188231286,8.10040056163509,7.3180903605064,3.9305261474312,6.06889558731693,5.20716771069616,4.4498510137285,4.01806417204558,6.83473244395618,8.45539408026285,5.98066184175915,9.10021697514037,7.19469396872976,8.39538852605252,8.61676240002969,6.68936260280798,11.0673727117358,10.5907937869968,9.18019659138823,7.4887801627045,5.37218905067903,5.87903124341476,7.9087437016917,6.49604114888975,6.80301443536429,6.55648470778174,4.20684073319891,6.20296014133224,3.53382574818517,4.41999478598999,4.03304740547362,4.0932309910696,4.61816839873581,5.2594605981706,3.17422537061296,8.21348027484039,7.71539166841491,5.37230772365051,3.86379188064381,3.75364950902364,1.64836461840539,6.00231461421384,5.01572104035363,6.21227026878773,9.66682996665071,6.30185064783336,10.1393377582776,8.22099023724771,6.0431511791176,9.45031500324528,8.10578165803597,9.5159905886683,13.4617681055473,7.05753963572401,5.98537310101547,7.17081144167364,7.77941494618541,6.28839487883947,7.72142735490059,5.55616819504038,7.2112270033613,7.06022261101994,8.59170519996911,5.32306529769503,4.14977951049368,5.80577346313271,5.25006249719928,6.26046611616185,8.09699275181225,8.34367146802959,5.40145817298374,7.00546031365621,4.12156976376312,5.48590803816665,6.03417740941747,6.43777712857767,6.68593516508711,8.09340671571843,6.00763716030903,6.0366231048015,4.99832451731901,5.83957689537206,9.53941861818155,6.4062909787054,6.99381824866501,4.91077251803627,5.88759996506671,6.17301155139652,7.74412791607632,5.14649538579898,3.86767897286937,4.3996316375834,4.19123696327079,4.40548887678801
|phase1_expression=8.96833543786846,1.39590163055744,2.72999543633722,1.51232105653415,1.00179145989269,6.5472916045637,4.90586545250604,8.00564605337773,9.57363310631334,10.5329036844897,14.0398733944914,19.5441789538574,7.19043065711064,9.26656265641372,7.32841475994458,3.84703008040669,3.49780939064073,9.14840279538889,8.77532375076728,12.3072999021429,5.27268398936633,12.9078236561151,10.4479915655574,4.47978783821539,4.35877634027623,3.44539178469012,3.87685796543167,5.17130958446134,4.75058548640935,4.28451220591882,5.98672378769323,17.14582818341,16.6067492647834,0,13.8648777480612,17.2884031172832,11.8418226632174,0.837063261473815,5.4693474116666,0,0.588231488031014,0.683045484958446,0.971020706062307,10.3235390739973,10.9487085717076,8.9937908559224,3.9119567217402,5.23260375313072,5.27246838562732,5.24960727500565,4.61955191363696,10.062679505548,4.69791296961662,6.5282592781021,4.7053131879945,3.08711323243136,2.86533439938757,4.64104883049698,8.09265843438391,6.87688273053643,12.6766280701236,6.77689064138264,4.4464739805557,7.64914759689189,8.89979726310277,10.6572017241915,6.89080254192331,7.68436610643109,5.39185984004084,5.94026128659439,6.94072372459561,15.4251531578054,14.5773237028065,4.65465037016825,3.83381884072945,11.0306254393203,12.1127469099328,10.9811110753261,10.1380311949121,8.17694983927202,7.41049913179518,14.0646610050325,12.0048689570594,19.6966913511088,11.7654650788144,12.0797720044204,10.3931326983345,12.3023634244698,3.86203585999239,2.79614772395106,5.2175607966302,8.60423876981386,8.15965600449301,10.2543606411185,7.14754059192436,11.6486990645307,6.60088774619234,10.7371103224176,11.6903702071291,15.1936017039446,8.16891834704747,14.115912515575,7.64415719119937,21.3320010945999,6.71122227134764,7.09407623330276,6.57181778519218,4.5673551887624,9.32176381129818,4.60170631100957,5.55153045651635,4.26251669636998,6.22661842591358,6.0289056221049,7.4080885495494,4.52399728786832,1.97755974187499,5.78397427679647,4.42305275974937,5.98537344805414,1.98757366614354,5.33362778448744,7.45567044872489,11.1256702864388,6.28340120440365,2.81002760729451,6.94927722134338,16.7972764678154,6.86179226194549,12.1330417917906,8.23501085073528,4.77486538028885,7.82209440865244,8.95004100656157,7.06479351502504,9.73447578406546,6.31404055871961,3.11017426525233,4.54900965180614,3.15662783829711,8.84819012146385,8.73627996847197,6.48223667299257,6.93242162044289,4.83059143974428,5.63700369253339,7.21503279109912,3.10444044886819,7.54487975264948,7.37513712654495,7.74184946321375,6.35667624039967,10.5657954705727,7.3132954969655,5.35033554660653,7.36426787228425,11.937624184325,11.5806558201622,16.4814829649444,5.59239585845855,2.81431271977315,5.04173772090842,3.78791576936336,4.32881309844288,6.17068451549513,3.95307706075693,3.75582761959467,2.91913355917924,5.10135534731789,4.26835406605648,3.72916523910936,4.5321996101853,6.14740322814942,4.83143107537338,7.36014819974445,9.98174740079059,1.65209391491899,4.7601101999438,8.31824177087412,7.19933682767359,8.76298736990235,5.04208811558356,5.11469500843202,5.51654315726422,3.79623249235609,4.11747386810027,3.77002813200404,2.98434708061726,6.43381487493096,6.29173586057955,5.18731319699266,5.37681437786791,7.58671603812327,7.19765629441292,6.76246414038483,8.75700709734851,6.98228953803453,5.40045813155453,5.50157872981038,6.05201606716369,4.55296310739987,5.79966670432462,13.933273473096,6.17326891149548,6.2898878436225,6.74586337154561,3.65148218499305,5.788251834058,6.62027214631691,4.31544206176216,2.7562988551756,4.3929826110093,2.87536413054709,2.97712758134803,5.92871578917665,6.56705082662491,5.9201146462231,6.75420929908714,4.24932337383191,9.47457058852424,6.84452901056509,6.11082308790677,6.10194645550105,4.35516269348721,3.57065461329021,1.17080188714679,4.25614889086716,3.5434350343804,4.62418829106713,3.93271955317771,2.59027472798843,2.89298117163023,13.5712155545345,6.52686820582452,4.42587845717133,4.69092468718045,10.2752377592187,8.90808818100744,7.86887737808042,5.04941854408746,6.62567260774139,5.0757036758563,4.52389135238878,5.25731355495614,6.23836287430704,4.81230102341015,6.8817819284732,4.09158201075837,5.53402889125133,7.39039027770156,6.10342366395555,8.72521457969551,7.81857404897165,6.43383479592888,3.98235415019888,8.49732226542435,9.97667737983678,6.22396763194464,5.61073596473468,6.45613810682248,5.42699415653264,7.27067458955011,5.70395805415554,5.05658812697306,2.10837217149998,6.18813259489121,5.7874732978144,6.12207719706455,4.78627129996192,4.71541477069503,3.3694644392032,3.74574516964348,6.41741180348272,3.34911444026059,2.3467170806371,2.1183207086382,4.19003956304428,3.13283880588812,3.87514624070173,5.48847616846218,3.58117032009409,5.74493149107714,3.20628920292836,9.6421157045465,5.98048082792484,5.77883230297023,6.2966139305702,3.39063222608444,3.14396723758358,3.43167259809784,5.60928818979723,5.318155188299,4.97519905695926,2.86401185404534,8.54107182669065,6.91286188231286,8.1004005616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|short_description=p1@Xrcc6bp1
|short_description=p1@Xrcc6bp1
}}
}}

Latest revision as of 17:06, 25 September 2015

Short description:p1@Xrcc6bp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Xrcc6bp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000026504, ENSMUST00000168520, NM_001159559, NM_026858, uc007hhf.2, uc007hhg.2, uc007hhh.2_5end
EntrezGene:Xrcc6bp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Xrcc6bp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.01
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E79.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F210.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.19
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E89.27
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.31
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.45
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F617.29
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F711.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.99
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.23
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.27
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.62
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I96.53
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.77
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D93.86
Mouse Schwann, donor2.CNhs12573.11746-123F92.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.25
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C17.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.52
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H15.78
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.99
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.86
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F14.77
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F28.95
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B29.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G43.16
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E28.74
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C64.83
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G87.22
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E710.57
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B55.35
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.58
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.48
heart, embryo E11.CNhs10586.331-24E95.59
heart, embryo E12.CNhs11015.353-12F52.81
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E53.95
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E32.92
heart, neonate N03.CNhs11221.1349-25I25.10
heart, neonate N10.CNhs11118.749-24G14.27
heart, neonate N16.CNhs11209.782-15G13.73
heart, neonate N20.CNhs11127.821-26I64.53
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D24.83
hippocampus, adult.CNhs10478.13-16E87.36
hippocampus, neonate N00.CNhs11228.627-43G19.98
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I58.32
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F75.52
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F22.98
intestine, neonate N10.CNhs11098.755-23A56.43
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I28.76
kidney, embryo E18.CNhs11001.1288-20C76.98
kidney, neonate N00.CNhs11214.646-21G75.40
kidney, neonate N10.CNhs11206.758-6D55.50
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H15.80
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F86.17
liver, embryo E13.CNhs10524.378-3H66.29
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D73.65
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G29.47
lung, embryo E14.CNhs10604.404-26F86.84
lung, embryo E15.CNhs11020.432-17C56.11
lung, embryo E16.CNhs10998.458-17B66.10
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E54.26
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.62
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C72.59
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A38.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.05
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.09
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.53
olfactory brain, adult.CNhs10489.18-22I97.39
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H78.73
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F29.98
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E66.12
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I53.58
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C99.64
spleen, adult.CNhs10465.25-2G25.98
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E38.54
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D48.10
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C63.93
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C59.10
testis, embryo E16.CNhs11033.470-26G57.19
testis, embryo E17.CNhs11029.486-18I58.40
testis, embryo E18.CNhs11027.503-18G58.62
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I411.07
testis, neonate N10.CNhs11204.763-44D910.59
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E27.49
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C16.80
thymus, embryo E18.CNhs10595.1273-19G46.56
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D34.42
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G74.62
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D56.00
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.30
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I87.06
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B16.29
whole body, embryo E16.CNhs10514.453-14F27.72
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.40
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.01
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.41
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C23.87
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
somatic stem cell1.26e-1291
multi fate stem cell1.26e-1291
stem cell3.78e-1297
connective tissue cell2.65e-0946
mesenchymal cell2.65e-0946
CNS neuron (sensu Vertebrata)9.52e-0723
neuroblast (sensu Vertebrata)9.52e-0723

Uber anatomy
Ontology termp-valuen
connective tissue2.65e-0946
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