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FFCP PHASE1:Mm9::chr16:6349114..6349188,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=268859
|EntrezGene=268859
|HGNC=
|HGNC=
|MCL_coexpression_id=39
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc007yce.2_5end
|association_with_transcript=0bp_to_uc007yce.2_5end
|cluster_id=chr16:6349114..6349188,+
|description=CAGE_peak_1_at_Rbfox1_5end
|description=CAGE_peak_1_at_Rbfox1_5end
|id=chr16:6349114..6349188,+
|id=chr16:6349114..6349188,+
|ontology_enrichment_celltype=CL:0000117!5.78e-14!23;CL:0000337!5.78e-14!23;CL:0000540!3.41e-08!33;CL:0000047!3.41e-08!33;CL:0000031!3.41e-08!33;CL:0000404!3.41e-08!33
|ontology_enrichment_celltype=CL:0000117!5.78e-14!23;CL:0000337!5.78e-14!23;CL:0000540!3.41e-08!33;CL:0000047!3.41e-08!33;CL:0000031!3.41e-08!33;CL:0000404!3.41e-08!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.19e-17,23;CL:0000337,9.19e-17,23;CL:0000540,1.01e-08,33;CL:0000047,1.01e-08,33;CL:0000031,1.01e-08,33;CL:0000404,1.01e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002020!1.00e-18!34;UBERON:0001049!4.67e-18!52;UBERON:0005068!4.67e-18!52;UBERON:0006241!4.67e-18!52;UBERON:0007135!4.67e-18!52;UBERON:0002346!6.23e-18!71;UBERON:0003075!6.23e-18!71;UBERON:0007284!6.23e-18!71;UBERON:0000955!1.15e-16!50;UBERON:0006238!1.15e-16!50;UBERON:0000033!1.93e-16!63;UBERON:0002616!3.27e-16!49;UBERON:0002791!1.13e-15!29;UBERON:0003528!1.13e-15!29;UBERON:0001893!1.13e-15!29;UBERON:0001017!4.80e-15!73;UBERON:0005743!4.80e-15!73;UBERON:0003056!5.12e-15!49;UBERON:0000073!7.16e-14!75;UBERON:0001016!7.16e-14!75;UBERON:0007811!7.30e-14!86;UBERON:0003080!1.02e-13!40;UBERON:0002780!3.18e-13!39;UBERON:0001890!3.18e-13!39;UBERON:0006240!3.18e-13!39;UBERON:0004121!1.14e-11!102;UBERON:0000924!1.14e-11!102;UBERON:0006601!1.14e-11!102;UBERON:0000956!3.34e-11!21;UBERON:0001869!3.34e-11!21;UBERON:0000203!3.34e-11!21;UBERON:0000153!7.77e-11!94;UBERON:0000025!4.42e-09!114;UBERON:0002619!1.05e-08!17;UBERON:0002021!1.59e-08!10;UBERON:0000411!1.59e-08!10;UBERON:0001950!1.59e-08!10;UBERON:0004111!1.99e-08!122;UBERON:0000477!8.62e-07!154
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.93e-23,34;UBERON:0000073,3.30e-23,54;UBERON:0001049,8.82e-22,52;UBERON:0005068,8.82e-22,52;UBERON:0006241,8.82e-22,52;UBERON:0007135,8.82e-22,52;UBERON:0002346,5.20e-20,64;UBERON:0003075,5.20e-20,64;UBERON:0007284,5.20e-20,64;UBERON:0003528,1.69e-19,29;UBERON:0002791,1.69e-19,29;UBERON:0001893,1.69e-19,29;UBERON:0000955,4.83e-18,47;UBERON:0006238,4.83e-18,47;UBERON:0002616,1.68e-17,46;UBERON:0001017,2.29e-17,73;UBERON:0001016,2.36e-16,75;UBERON:0010314,2.60e-16,92;UBERON:0003056,3.82e-16,49;UBERON:0003080,5.93e-16,40;UBERON:0002780,2.36e-15,39;UBERON:0001890,2.36e-15,39;UBERON:0006240,2.36e-15,39;UBERON:0010371,4.45e-15,73;UBERON:0000956,5.39e-14,21;UBERON:0001869,5.39e-14,21;UBERON:0000203,5.39e-14,21;UBERON:0004121,8.92e-13,95;UBERON:0000924,8.92e-13,95;UBERON:0006601,8.92e-13,95;UBERON:0002619,6.54e-11,17;UBERON:0002021,4.25e-10,10;UBERON:0000411,4.25e-10,10;UBERON:0001950,4.25e-10,10;UBERON:0000025,5.17e-08,114;UBERON:0004111,5.71e-07,122
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5552028775931,21.6886301501533,12.6766280701236,0,0,0,0,0,0.299600110518405,0,30.5884356310009,23.3560273313825,25.4493203235172,19.4242669394586,17.2277461942259,11.8816075238505,7.85932862349538,14.7075005857603,15.4162233399144,16.8547286272448,17.2039317246993,22.0250100509424,21.4081086029639,23.962015045611,20.6595419261022,10.1297269805702,8.09830713217094,23.8649154233671,24.2031857358475,16.5895506784518,0,0,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.94112595522402,0,0.890652834388949,2.77576522825817,1.21786191324856,0.461230994512117,2.11011696773672,4.58595957829249,0.502666365318702,0,4.04878199375753,0,0,0,0,0,214.315543412453,210.703387054336,0,0,0,0,12.1330417917906,60.8475801748773,6.91098936620754,95.2557274653675,103.053329304123,15.7918913865266,38.126696820923,2.44414473240759,0.373220911830279,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0.720248519221397,2.41127708537144,4.89862793889561,5.12454881139399,3.65436725782942,8.79591460512653,0,0,0.175951124163949,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,1.64168241986767,1.80062061461015,1.65721314909647,0.590292695242212,1.3884040159864,0.697601834251224,0.536546802799238,1.28441876603886,0.987359099480883,1.80584210487005,1.54030738137126,2.48539978623065,3.95190207523891,2.54992195644706,38.6933505357994,28.6074822414411,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,1.14248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0.624075346229121,0,0.358794827043824,0.482443521363367,0.184753190166605,0.37898282354097,0.977789858652155,1.18821560042632,1.64283173801951,1.50755631697634,0.476087281772027,0.585400943573396,6.77831119656621,5.53661724121937,8.77001227616179,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0,18.6238684385839,14.8858841972098,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,6.10510501201433,1.13552068166615,0.890328018336276,1.62886959353576,0,1.32745138339963,0.971122544619926,0.906970670894253,0.377210159511796,0.590603785761546,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,1.06404140185364,1.07021290561242,0.987294123612726,0,0,0,1.10264199027481,0,0,0,0,0,0,15.5757253688828,0,1.23832120777933,1.11116716421827,0.188368457004691,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,1.5256441023948,1.17183946359555,0.104859344425711,0.241584120826006,0.288030006257865,3.47612232690996,0.202725215290164,0.924398614483445,2.5984164595559,5.01274747868948,3.77494574084403,3.72605893511903,1.32920574457119,2.22126189885925,2.28620419965,1.91569751759997,2.72882066071307,2.98256709085021,1.8700304349051,0,0,0,0,1.35232715822533,0.187682475451182,0.183151624267265,0,0.501572104035363,104.479090884157,134.414969060096,115.151998201319,74.240574772473,119.204358440092,150.32338558055,110.703690038016,119.335118854418,119.176453562846,114.942789208904,0,2.39414924040619,2.90247129782028,2.67417388775123,2.72497111416377,3.30918315210025,4.88942801163553,4.12070114477788,7.38114182061175,5.55933865880354,7.60437899670719,3.01802146217722,4.30750934361459,4.28968521112624,4.53740204749345,2.38146845641537,4.63537303779422,3.08654752741928,5.35711671044299,4.85756436443511,4.4573002810104,3.01708870470874,5.48403236878838,4.0696996657052,4.70546902076653,6.09225176820071,5.12198324043763,4.47218509444333,4.20992752922171,4.48913817326191,5.45721083371201,4.43270170690036,6.13846564754534,3.25367366490529,3.85813221962283,5.9954538705107,2.57324769289949,2.57845264857958,1.14772999241306,0.661774257358546,0.695603506861264
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5552028775931,21.6886301501533,12.6766280701236,0,0,0,0,0,0.299600110518405,0,30.5884356310009,23.3560273313825,25.4493203235172,19.4242669394586,17.2277461942259,11.8816075238505,7.85932862349538,14.7075005857603,15.4162233399144,16.8547286272448,17.2039317246993,22.0250100509424,21.4081086029639,23.962015045611,20.6595419261022,10.1297269805702,8.09830713217094,23.8649154233671,24.2031857358475,16.5895506784518,0,0,0.579728977403356,0,0,0,0,0,1.54488862144927,0,0,0,0.704217098883403,0,0,0,0,0,0,1.94112595522402,0,0.890652834388949,2.77576522825817,1.21786191324856,0.461230994512117,2.11011696773672,4.58595957829249,0.502666365318702,0,4.04878199375753,0,0,0,0,0,214.315543412453,210.703387054336,0,0,0,0,12.1330417917906,60.8475801748773,6.91098936620754,95.2557274653675,103.053329304123,15.7918913865266,38.126696820923,2.44414473240759,0.373220911830279,0.252722758433675,1.89397670297827,0.390361328888111,0.229902104433473,0.720248519221397,2.41127708537144,4.89862793889561,5.12454881139399,3.65436725782942,8.79591460512653,0,0,0.175951124163949,0.43839146485515,0,0,0,0.59710280045548,0,0,0,0,1.64168241986767,1.80062061461015,1.65721314909647,0.590292695242212,1.3884040159864,0.697601834251224,0.536546802799238,1.28441876603886,0.987359099480883,1.80584210487005,1.54030738137126,2.48539978623065,3.95190207523891,2.54992195644706,38.6933505357994,28.6074822414411,0,0,0.426576501070468,0.464473343720877,0.902072229254653,0.403367049246685,0.444756087689741,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0.189667900953082,1.14248512609729,0,0,0.193952487167626,0.140271639780637,0.0632365371242573,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0.624075346229121,0,0.358794827043824,0.482443521363367,0.184753190166605,0.37898282354097,0.977789858652155,1.18821560042632,1.64283173801951,1.50755631697634,0.476087281772027,0.585400943573396,6.77831119656621,5.53661724121937,8.77001227616179,0.163863314715738,0.172684981865896,0.578596234326046,0,0,0,0,18.6238684385839,14.8858841972098,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0.395287777946524,6.10510501201433,1.13552068166615,0.890328018336276,1.62886959353576,0,1.32745138339963,0.971122544619926,0.906970670894253,0.377210159511796,0.590603785761546,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,0.316036757935816,0,0,0.680879211507576,0,0.258717367565509,0,1.06404140185364,1.07021290561242,0.987294123612726,0,0,0,1.10264199027481,0,0,0,0,0,0,15.5757253688828,0,1.23832120777933,1.11116716421827,0.188368457004691,0,0,0,0,0,0,0,0.609958401380546,0.324016022465404,0.627264888043406,0.436725127492355,0.269728692769641,0.330613822901344,0.26175594198403,0,0,0,0,0.165458490457098,0.194451188344048,1.03327858782185,0.337912250981556,1.5256441023948,1.17183946359555,0.104859344425711,0.241584120826006,0.288030006257865,3.47612232690996,0.202725215290164,0.924398614483445,2.5984164595559,5.01274747868948,3.77494574084403,3.72605893511903,1.32920574457119,2.22126189885925,2.28620419965,1.91569751759997,2.72882066071307,2.98256709085021,1.8700304349051,0,0,0,0,1.35232715822533,0.187682475451182,0.183151624267265,0,0.501572104035363,104.479090884157,134.414969060096,115.151998201319,74.240574772473,119.204358440092,150.32338558055,110.703690038016,119.335118854418,119.176453562846,114.942789208904,0,2.39414924040619,2.90247129782028,2.67417388775123,2.72497111416377,3.30918315210025,4.88942801163553,4.12070114477788,7.38114182061175,5.55933865880354,7.60437899670719,3.01802146217722,4.30750934361459,4.28968521112624,4.53740204749345,2.38146845641537,4.63537303779422,3.08654752741928,5.35711671044299,4.85756436443511,4.4573002810104,3.01708870470874,5.48403236878838,4.0696996657052,4.70546902076653,6.09225176820071,5.12198324043763,4.47218509444333,4.20992752922171,4.48913817326191,5.45721083371201,4.43270170690036,6.13846564754534,3.25367366490529,3.85813221962283,5.9954538705107,2.57324769289949,2.57845264857958,1.14772999241306,0.661774257358546,0.695603506861264
|short_description=p1@Rbfox1
|short_description=p1@Rbfox1
}}
}}

Latest revision as of 17:06, 25 September 2015

Short description:p1@Rbfox1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbfox1_5end
Coexpression cluster:MCL_coexpression_mm9:39
Association with transcript: 0bp_to_uc007yce.2_5end
EntrezGene:Rbfox1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbfox1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C313.56
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.59
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.20
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.96
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E420.66
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.10
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D623.86
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.20
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.94
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C52.78
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C14.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2214.32
cerebellum, neonate N30.CNhs11135.1395-42I2210.70
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D860.85
corpus striatum, neonate N00.CNhs11226.630-43F16.91
cortex, adult.CNhs10473.12-14D595.26
cortex, neonate N30.CNhs11107.1392-42F2103.05
diencephalon, adult.CNhs10482.20-12F215.79
diencephalon, neonate N30.CNhs11201.1388-42B238.13
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D42.41
eyeball, neonate N00.CNhs11207.633-15C64.90
eyeball, neonate N01.CNhs11140.1532-43E75.12
eyeball, neonate N02.CNhs11205.1551-44G83.65
eyeball, neonate N16.CNhs11188.777-19A28.80
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.66
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G11.54
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D22.55
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G128.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E56.78
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E68.77
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.62
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C915.58
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.53
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C15.01
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.73
thymus, neonate N03.CNhs11137.2104-43C71.33
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1104.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2134.41
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3115.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D774.24
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4119.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5150.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6110.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7119.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8119.18
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9114.94
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.38
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.64
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.12
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.19e-1723
neuroblast (sensu Vertebrata)9.19e-1723
neuron1.01e-0833
neuronal stem cell1.01e-0833
neuroblast1.01e-0833
electrically signaling cell1.01e-0833

Uber anatomy
Ontology termp-valuen
gray matter2.93e-2334
regional part of nervous system3.30e-2354
neural tube8.82e-2252
neural rod8.82e-2252
future spinal cord8.82e-2252
neural keel8.82e-2252
neurectoderm5.20e-2064
neural plate5.20e-2064
presumptive neural plate5.20e-2064
brain grey matter1.69e-1929
regional part of telencephalon1.69e-1929
telencephalon1.69e-1929
brain4.83e-1847
future brain4.83e-1847
regional part of brain1.68e-1746
central nervous system2.29e-1773
nervous system2.36e-1675
structure with developmental contribution from neural crest2.60e-1692
pre-chordal neural plate3.82e-1649
anterior neural tube5.93e-1640
regional part of forebrain2.36e-1539
forebrain2.36e-1539
future forebrain2.36e-1539
ecto-epithelium4.45e-1573
cerebral cortex5.39e-1421
cerebral hemisphere5.39e-1421
pallium5.39e-1421
ectoderm-derived structure8.92e-1395
ectoderm8.92e-1395
presumptive ectoderm8.92e-1395
regional part of cerebral cortex6.54e-1117
occipital lobe4.25e-1010
visual cortex4.25e-1010
neocortex4.25e-1010
tube5.17e-08114
anatomical conduit5.71e-07122
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