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FFCP PHASE1:Mm9::chr16:59638950..59639017,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56297
|EntrezGene=56297
|HGNC=
|HGNC=
|MCL_coexpression_id=463
|TSSclassifier=NA
|UniProt=O88848,D3Z067,E9PZG3
|UniProt=O88848,D3Z067,E9PZG3
|association_with_transcript=0bp_to_ENSMUST00000023405,ENSMUST00000149797,ENSMUST00000172185_5end
|association_with_transcript=0bp_to_ENSMUST00000023405,ENSMUST00000149797,ENSMUST00000172185_5end
|cluster_id=chr16:59638950..59639017,-
|description=CAGE_peak_1_at_Arl6_5end
|description=CAGE_peak_1_at_Arl6_5end
|id=chr16:59638950..59639017,-
|id=chr16:59638950..59639017,-
|ontology_enrichment_celltype=CL:0000055!6.66e-11!50;CL:0000221!1.06e-10!44;CL:0000133!1.06e-10!44;CL:0002319!2.57e-10!43;CL:0000393!3.65e-10!39;CL:0000211!3.65e-10!39;CL:0000540!5.22e-09!33;CL:0000047!5.22e-09!33;CL:0000031!5.22e-09!33;CL:0000404!5.22e-09!33;CL:0000117!5.09e-08!23;CL:0000337!5.09e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000221,1.06e-10,44;CL:0000133,1.06e-10,44;CL:0002319,2.57e-10,43;CL:0000393,3.64e-10,39;CL:0000211,3.64e-10,39;CL:0000540,5.21e-09,33;CL:0000047,5.21e-09,33;CL:0000031,5.21e-09,33;CL:0000404,5.21e-09,33;CL:0000117,5.08e-08,23;CL:0000337,5.08e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.17e-27!75;UBERON:0001016!1.17e-27!75;UBERON:0001017!6.46e-27!73;UBERON:0005743!6.46e-27!73;UBERON:0000033!4.32e-26!63;UBERON:0004121!5.63e-25!102;UBERON:0000924!5.63e-25!102;UBERON:0006601!5.63e-25!102;UBERON:0002346!8.37e-25!71;UBERON:0003075!8.37e-25!71;UBERON:0007284!8.37e-25!71;UBERON:0001049!1.24e-22!52;UBERON:0005068!1.24e-22!52;UBERON:0006241!1.24e-22!52;UBERON:0007135!1.24e-22!52;UBERON:0000955!3.45e-22!50;UBERON:0006238!3.45e-22!50;UBERON:0003056!6.89e-22!49;UBERON:0002616!1.29e-21!49;UBERON:0003080!8.87e-18!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002020!2.47e-14!34;UBERON:0002791!1.03e-12!29;UBERON:0003528!1.03e-12!29;UBERON:0001893!1.03e-12!29;UBERON:0000153!1.89e-12!94;UBERON:0007811!2.69e-12!86;UBERON:0004111!3.49e-12!122;UBERON:0000025!5.54e-12!114;UBERON:0000956!7.23e-09!21;UBERON:0001869!7.23e-09!21;UBERON:0000203!7.23e-09!21;UBERON:0002619!3.84e-08!17;UBERON:0002021!4.34e-07!10;UBERON:0000411!4.34e-07!10;UBERON:0001950!4.34e-07!10;UBERON:0000475!5.15e-07!200
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.16e-27,75;UBERON:0002346,1.58e-27,64;UBERON:0003075,1.58e-27,64;UBERON:0007284,1.58e-27,64;UBERON:0001017,6.42e-27,73;UBERON:0004121,9.72e-27,95;UBERON:0000924,9.72e-27,95;UBERON:0006601,9.72e-27,95;UBERON:0010314,6.12e-25,92;UBERON:0010371,3.34e-24,73;UBERON:0000073,1.90e-23,54;UBERON:0001049,1.23e-22,52;UBERON:0005068,1.23e-22,52;UBERON:0006241,1.23e-22,52;UBERON:0007135,1.23e-22,52;UBERON:0003056,6.86e-22,49;UBERON:0000955,8.53e-21,47;UBERON:0006238,8.53e-21,47;UBERON:0002616,3.13e-20,46;UBERON:0003080,8.84e-18,40;UBERON:0002780,4.27e-17,39;UBERON:0001890,4.27e-17,39;UBERON:0006240,4.27e-17,39;UBERON:0002020,2.46e-14,34;UBERON:0003528,1.02e-12,29;UBERON:0002791,1.02e-12,29;UBERON:0001893,1.02e-12,29;UBERON:0004111,3.48e-12,122;UBERON:0000025,5.53e-12,114;UBERON:0000956,7.22e-09,21;UBERON:0001869,7.22e-09,21;UBERON:0000203,7.22e-09,21;UBERON:0002619,3.84e-08,17;UBERON:0002021,4.34e-07,10;UBERON:0000411,4.34e-07,10;UBERON:0001950,4.34e-07,10
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21391142507,4.27729411862916,4.34937519160848,118.37551712368,10.0176085849466,8.93475848468327,9.13920585217024,11.3660644660403,13.0096216627899,8.9191501370773,10.8069639420479,10.5907937869968,61.8455349314575,79.208251720913,6.00421129193539,7.70355818102624,12.8388696456034,7.01572444080093,8.77230808770659,5.76175928865668,4.68762253127878,4.57837534241189,4.13962444787405,5.41068327250499,3.83139503519994,3.80085734885034,3.46362629905186,2.92192255453922,8.61575457737803,5.10567692760349,5.11368982674011,4.36500002546604,18.9325802151547,9.19644129710792,8.79127796482872,7.71726164684637,13.5424468089548,35.5793660848752,38.6673198666029,35.5195218332426,25.2624178045221,38.364621107156,33.2373314851468,31.0510350106631,34.2244114450408,38.0639623546732,35.2077011991238,21.8991303402613,18.7541690498485,15.0245573063638,10.6966955510049,9.4325923182592,8.82448840560068,12.0013233012872,11.743998262617,9.62757628775446,10.8659801058433,11.660047794951,11.6948331659367,7.77224512000024,10.8202507564229,9.70659425349864,10.0021675169445,9.03897742369873,9.83837024364896,5.35711671044299,10.745521169811,8.57173130963539,11.8908790126756,8.34526664815623,9.88355633099834,11.2931256498397,11.0845136338096,11.5244622909847,7.62902163169744,11.0001332215148,12.906272248128,8.18581625056802,8.0773675547962,9.00308294973317,9.45114731234393,7.71626443924566,8.24374907195222,12.3983752476066,9.23945532407683,6.69509162240952,8.6030653456611,12.2889952878823
|phase1_expression=34.9124486688451,0.348975407639361,1.81999695755814,0,0,1.17515490338323,2.56973904655078,0.774739940649458,0,0,0.513653904676515,0.638177271962691,0.684802919724823,0.34968160967599,2.33176833270964,2.02475267389826,2.09868563438444,1.26184866143295,1.91960207048034,4.66828616977833,35.1228788323918,14.3971879241284,18.0227854505865,1.27993938234725,2.52350209173887,1.14846392823004,0.86152399231815,1.07735616342945,0.950117097281869,0.504060259519861,2.43903561720835,8.25539875497521,6.1506478758457,15.8481681015439,1.1554064790051,1.66234645358492,2.04169356262369,1.67412652294763,3.906676722619,0.523523743973798,0,0,0,23.6686017794085,23.6208249741469,17.2533947031981,10.1710874765245,22.8926414199469,17.7945808014922,22.5538682926169,20.7179904005537,21.5628846547457,1.67782606057736,0,0.336093799142464,12.3484529297255,14.6132054368766,14.4388185837684,19.624696703381,29.0945038599618,17.747279298173,8.13226876965917,4.4464739805557,8.09909745553259,7.9109309005358,2.1314403448383,5.99200221036809,11.5265491596466,16.4866483570479,14.5806413398226,14.5124223332454,17.7103610330358,20.0990372265968,16.5362578940188,15.4311208339361,10.1114066527102,24.2254938198655,27.9635270406561,23.5017995882053,20.1786020227197,25.3420772778675,25.5247551572812,34.0603258781685,41.6444331423443,31.4764390420229,16.4992007865254,27.7624777558251,27.7735174279698,18.1742863999642,20.6310359091524,8.69593466105033,4.30211938490693,3.39985666853875,2.69851595818909,1.94932925234301,4.48026887097336,13.2017754923847,30.1661670963162,23.9003124234639,19.0803370235584,23.9433813620357,19.2489716121477,10.1922095882658,14.2213340630666,11.6905162146056,9.62767488805375,9.0994400102661,8.67797485864856,9.32176381129818,16.3286352971307,6.59244241711316,9.13396434936424,8.07154240396205,8.59119051149949,10.4653949350777,10.053327306374,2.71914464507811,15.1829324765907,8.84610551949874,6.63244084784378,5.74187947997023,6.78825354389311,1.86391761218122,38.6470652055242,31.2075593152048,4.08731288333746,5.63131085177825,7.7987355029143,6.22644112658017,39.5447288028732,37.5150494311274,22.9947464366542,32.8527965163402,34.7773021969249,43.4277013129481,32.2860113504838,13.6464747559424,9.82815067819735,20.4705434331277,17.0457903268044,22.1204753036596,27.8181546364502,26.829257340997,23.6606564002073,22.7922272156948,30.3629517075094,24.2687466609698,39.8403190938084,17.0298714416945,17.2086532952716,16.1875034230833,10.5213951565236,10.8438427197983,7.66154766348766,11.9353639116607,12.1410902759281,6.31991868581911,6.69104558498259,4.83077948972507,12.6346721246656,9.85009451920604,12.064158117888,14.678173606283,13.5767319905709,14.9639099500757,14.6496385192757,11.267482858784,10.6256461554124,11.6837493438571,12.4767272700112,8.51222500231485,9.9415991449226,10.9775057645525,10.8707199195901,35.1184214102093,21.1983501501326,1.32167513193519,2.64450566663544,17.4896365438892,12.0763069367428,9.665059599157,6.05050573870028,4.89231696458715,7.03834816616469,3.79623249235609,4.28217282282428,6.78605063760728,4.77495532898762,7.60359939764569,6.29173586057955,3.45820879799511,1.39398891278057,16.6907752838712,12.9100819248994,11.270773567308,19.3468761453049,19.7831536910978,15.850695295212,25.1049052383301,28.193538264104,35.3247137643093,36.1553690290876,7.70776830426587,5.33904338291501,4.32429789249047,2.47348323623339,2.23146133527353,1.20588579876208,2.80088436959562,3.16465751195892,1.78348749452539,3.56929837144506,1.43768206527355,2.60498663367952,5.30464044294753,4.2938409251009,4.84373016509163,8.20153986317724,18.6600722068271,17.8121927064256,17.4372524792968,12.5611363473639,16.6630076284836,13.9030193676707,13.3304438896168,6.63454402716516,14.6600684018758,10.6303051031412,13.3942005672289,15.8947415274266,14.1601685130034,14.3202567995696,12.0633027151418,7.61467957346193,3.93411418415229,4.13905119457099,36.6055345172166,30.1234034541962,16.8852993737976,4.79694761688309,15.7754109708128,13.6653560503823,18.5264122050207,15.0550342710108,9.80314165962534,11.6061377623421,14.1683745586213,14.6127928955656,15.8115111178609,31.1681676929153,20.0135520143659,7.30068975035746,9.44744364250741,24.2506080769627,10.619611067197,8.98288353773431,10.883648050731,9.6188590675508,10.335566250827,10.7602301780375,8.5281336745513,10.1789444253702,13.1904030002347,11.6933600436252,8.4334886859999,7.21948802737308,52.4276992860834,25.3886142584147,12.6771510107099,23.5770738534752,36.7094283639506,24.0797903762795,29.7833727289839,16.1366423030738,6.33613611772018,7.83778662196135,8.15955072803359,5.11147384118588,5.48979050766079,11.1578911117088,9.19167048824151,10.1767357841938,2.91480836629851,33.7474049659128,4.27177201994632,9.28740905834501,5.37064129372164,3.76736914009382,3.2806614653046,3.20289442489132,5.60928818979723,7.41742697315387,7.87739850685216,14.3200592702267,14.8677916983134,13.8257237646257,11.3405607862891,11.2907679847813,12.4466661335321,11.8680624818642,8.76126630688561,9.42321391142507,4.27729411862916,4.34937519160848,118.37551712368,10.0176085849466,8.93475848468327,9.13920585217024,11.3660644660403,13.0096216627899,8.9191501370773,10.8069639420479,10.5907937869968,61.8455349314575,79.208251720913,6.00421129193539,7.70355818102624,12.8388696456034,7.01572444080093,8.77230808770659,5.76175928865668,4.68762253127878,4.57837534241189,4.13962444787405,5.41068327250499,3.83139503519994,3.80085734885034,3.46362629905186,2.92192255453922,8.61575457737803,5.10567692760349,5.11368982674011,4.36500002546604,18.9325802151547,9.19644129710792,8.79127796482872,7.71726164684637,13.5424468089548,35.5793660848752,38.6673198666029,35.5195218332426,25.2624178045221,38.364621107156,33.2373314851468,31.0510350106631,34.2244114450408,38.0639623546732,35.2077011991238,21.8991303402613,18.7541690498485,15.0245573063638,10.6966955510049,9.4325923182592,8.82448840560068,12.0013233012872,11.743998262617,9.62757628775446,10.8659801058433,11.660047794951,11.6948331659367,7.77224512000024,10.8202507564229,9.70659425349864,10.0021675169445,9.03897742369873,9.83837024364896,5.35711671044299,10.745521169811,8.57173130963539,11.8908790126756,8.34526664815623,9.88355633099834,11.2931256498397,11.0845136338096,11.5244622909847,7.62902163169744,11.0001332215148,12.906272248128,8.18581625056802,8.0773675547962,9.00308294973317,9.45114731234393,7.71626443924566,8.24374907195222,12.3983752476066,9.23945532407683,6.69509162240952,8.6030653456611,12.2889952878823
|short_description=p1@Arl6
|short_description=p1@Arl6
}}
}}

Latest revision as of 16:57, 25 September 2015

Short description:p1@Arl6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arl6_5end
Coexpression cluster:MCL_coexpression_mm9:463
Association with transcript: 0bp_to_ENSMUST00000023405, ENSMUST00000149797, ENSMUST00000172185_5end
EntrezGene:Arl6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arl6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.64
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A335.12
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I918.02
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D923.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B317.25
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C222.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.79
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C322.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C421.56
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E114.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E329.09
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.13
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.58
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F117.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F327.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F425.34
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F627.76
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E127.77
Mouse Schwann, donor1.CNhs12507.11728-123D918.17
Mouse Schwann, donor2.CNhs12573.11746-123F920.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I730.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E323.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G111.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.63
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.10
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.68
accessory axillary lymph node, adult.CNhs10475.1063-29H99.32
adrenal gland, adult.CNhs10508.49-24D716.33
adrenal gland, embryo E14.CNhs11038.406-44C56.59
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I18.07
adrenal gland, embryo E18.CNhs11026.1262-18F58.59
adrenal gland, neonate N00.CNhs11191.1311-23C110.47
adrenal gland, neonate N25.CNhs11223.1377-27I310.05
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H115.18
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A65.74
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B238.65
cerebellum, neonate N30.CNhs11135.1395-42I231.21
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A439.54
corpus striatum, adult.CNhs10487.19-21D837.52
corpus striatum, neonate N00.CNhs11226.630-43F122.99
cortex, adult.CNhs10473.12-14D532.85
cortex, neonate N30.CNhs11107.1392-42F234.78
diencephalon, adult.CNhs10482.20-12F243.43
diencephalon, neonate N30.CNhs11201.1388-42B232.29
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B113.65
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.83
epididymis, adult.CNhs10490.58-23B220.47
eyeball, adult.CNhs10484.31-12G417.05
eyeball, embryo E12.CNhs11016.345-16C622.12
eyeball, embryo E14.CNhs10521.399-16E227.82
eyeball, embryo E15.CNhs10593.426-16C926.83
eyeball, embryo E17.CNhs11023.1261-18D423.66
eyeball, neonate N00.CNhs11207.633-15C622.79
eyeball, neonate N01.CNhs11140.1532-43E730.36
eyeball, neonate N02.CNhs11205.1551-44G824.27
eyeball, neonate N16.CNhs11188.777-19A239.84
forelimb, embryo E11.CNhs10596.335-25E217.03
forelimb, embryo E12.CNhs10600.359-14H217.21
forelimb, embryo E13.CNhs10589.384-1E216.19
forelimb, embryo E14.CNhs10577.413-26A810.52
forelimb, embryo E15.CNhs11007.437-20E710.84
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I612.14
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.69
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E912.63
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I912.06
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C813.58
heart, embryo E16.CNhs11021.457-17C614.96
heart, embryo E17.CNhs11025.479-18E514.65
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E310.63
heart, neonate N03.CNhs11221.1349-25I211.68
heart, neonate N10.CNhs11118.749-24G112.48
heart, neonate N16.CNhs11209.782-15G18.51
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D210.87
hippocampus, adult.CNhs10478.13-16E835.12
hippocampus, neonate N00.CNhs11228.627-43G121.20
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I517.49
intestine, embryo E13.CNhs11010.381-16D512.08
intestine, embryo E15.CNhs10602.976-16D89.67
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A57.60
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I916.69
kidney, embryo E15.CNhs10997.434-16F812.91
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C719.78
kidney, neonate N00.CNhs11214.646-21G715.85
kidney, neonate N10.CNhs11206.758-6D525.10
kidney, neonate N20.CNhs11113.832-19I128.19
kidney, neonate N25.CNhs11122.1353-25F335.32
kidney, neonate N30.CNhs11203.1385-42H136.16
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F85.34
liver, embryo E13.CNhs10524.378-3H64.32
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B118.66
lung, embryo E12.CNhs10522.354-16G217.81
lung, embryo E14.CNhs10604.404-26F817.44
lung, embryo E15.CNhs11020.432-17C512.56
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A613.90
lung, embryo E18.CNhs10583.1287-20I613.33
lung, neonate N00.CNhs11224.640-42C66.63
lung, neonate N06.CNhs11212.683-20E514.66
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A415.89
lung, neonate N25.CNhs11119.1359-25C714.16
lung, neonate N30.CNhs11133.1394-42H214.32
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C236.61
medulla oblongata, neonate N30.CNhs11200.1396-42A330.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E115.78
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.53
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D89.80
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.61
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.61
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D615.81
olfactory brain, adult.CNhs10489.18-22I931.17
ovary, adult.CNhs10507.91-2I720.01
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G624.25
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E59.62
pancreas, embryo E17.CNhs10599.1558-45G310.34
pancreas, embryo E18.CNhs10580.1535-43I710.76
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D813.19
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G852.43
pituitary gland, embryo E12.CNhs11018.346-16E625.39
pituitary gland, embryo E13.CNhs11009.370-44C712.68
pituitary gland, embryo E14.CNhs11037.398-44A523.58
pituitary gland, embryo E15.CNhs10592.427-16B936.71
pituitary gland, embryo E16.CNhs11036.449-43F624.08
pituitary gland, embryo E17.CNhs11039.1265-44F529.78
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G37.84
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G45.49
skin, neonate N03.CNhs11215.662-22H311.16
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C410.18
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C933.75
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D37.88
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E314.87
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D411.34
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C612.45
stomach, neonate N03.CNhs11193.1340-24B811.87
stomach, neonate N07.CNhs11210.718-18A98.76
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I14.28
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G5118.38
testis, embryo E13.CNhs11031.389-23F510.02
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G59.14
testis, embryo E17.CNhs11029.486-18I511.37
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B78.92
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D910.59
testis, neonate N20.CNhs11110.839-18H361.85
testis, neonate N30.CNhs11130.1391-42E279.21
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I212.84
thymus, embryo E16.CNhs11002.456-26C57.02
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G45.76
thymus, neonate N02.CNhs11181.1541-43F84.69
thymus, neonate N03.CNhs11137.2104-43C74.58
thymus, neonate N06.CNhs11197.681-26C44.14
thymus, neonate N07.CNhs11211.713-19D35.41
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G22.92
tongue, adult.CNhs10499.32-1B48.62
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.37
urinary bladder, adult.CNhs10481.879-12E418.93
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E58.79
vagina, adult.CNhs10502.89-27D57.72
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A238.67
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.26
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A734.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A838.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A935.21
whole body, embryo E11.CNhs11014.324-5I821.90
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H215.02
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B19.43
whole body, embryo E16.CNhs10514.453-14F28.82
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G511.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.87
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.82
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.84
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.45
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C29.24
whole body, neonate N01.CNhs10576.659-23C66.70
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.06e-1044
neurectodermal cell1.06e-1044
neural cell2.57e-1043
electrically responsive cell3.64e-1039
electrically active cell3.64e-1039
neuron5.21e-0933
neuronal stem cell5.21e-0933
neuroblast5.21e-0933
electrically signaling cell5.21e-0933
CNS neuron (sensu Vertebrata)5.08e-0823
neuroblast (sensu Vertebrata)5.08e-0823

Uber anatomy
Ontology termp-valuen
nervous system1.16e-2775
neurectoderm1.58e-2764
neural plate1.58e-2764
presumptive neural plate1.58e-2764
central nervous system6.42e-2773
ectoderm-derived structure9.72e-2795
ectoderm9.72e-2795
presumptive ectoderm9.72e-2795
structure with developmental contribution from neural crest6.12e-2592
ecto-epithelium3.34e-2473
regional part of nervous system1.90e-2354
neural tube1.23e-2252
neural rod1.23e-2252
future spinal cord1.23e-2252
neural keel1.23e-2252
pre-chordal neural plate6.86e-2249
brain8.53e-2147
future brain8.53e-2147
regional part of brain3.13e-2046
anterior neural tube8.84e-1840
regional part of forebrain4.27e-1739
forebrain4.27e-1739
future forebrain4.27e-1739
gray matter2.46e-1434
brain grey matter1.02e-1229
regional part of telencephalon1.02e-1229
telencephalon1.02e-1229
anatomical conduit3.48e-12122
tube5.53e-12114
cerebral cortex7.22e-0921
cerebral hemisphere7.22e-0921
pallium7.22e-0921
regional part of cerebral cortex3.84e-0817
occipital lobe4.34e-0710
visual cortex4.34e-0710
neocortex4.34e-0710
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