FFCP PHASE1:Mm9::chr11:75993160..75993198,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:75993160..75993198,+
|short_description=p3@Fam57a
|description=CAGE_peak_3_at_Fam57a_5end
|association_with_transcript=0bp_to_ENSMUST00000127340,ENSMUST00...") |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=116972 | |EntrezGene=116972 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B7ZC15 | |UniProt=B7ZC15 | ||
|association_with_transcript=0bp_to_ENSMUST00000127340,ENSMUST00000129853,uc007kff.1_5end | |||
|cluster_id=chr11:75993160..75993198,+ | |||
|description=CAGE_peak_3_at_Fam57a_5end | |||
|id=chr11:75993160..75993198,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.55e-13!86;UBERON:0000153!1.45e-11!94;UBERON:0001049!2.59e-11!52;UBERON:0005068!2.59e-11!52;UBERON:0006241!2.59e-11!52;UBERON:0007135!2.59e-11!52;UBERON:0000955!4.87e-11!50;UBERON:0006238!4.87e-11!50;UBERON:0002616!1.88e-10!49;UBERON:0002346!3.33e-10!71;UBERON:0003075!3.33e-10!71;UBERON:0007284!3.33e-10!71;UBERON:0003080!1.26e-09!40;UBERON:0002020!3.58e-09!34;UBERON:0001017!4.14e-09!73;UBERON:0005743!4.14e-09!73;UBERON:0002780!4.20e-09!39;UBERON:0001890!4.20e-09!39;UBERON:0006240!4.20e-09!39;UBERON:0000033!5.83e-09!63;UBERON:0003056!6.36e-09!49;UBERON:0000073!9.17e-09!75;UBERON:0001016!9.17e-09!75;UBERON:0002791!2.31e-08!29;UBERON:0003528!2.31e-08!29;UBERON:0001893!2.31e-08!29;UBERON:0000475!2.44e-08!200;UBERON:0000477!9.66e-08!154;UBERON:0000468!1.01e-07!333;UBERON:0000922!2.75e-07!328;UBERON:0004121!6.20e-07!102;UBERON:0000924!6.20e-07!102;UBERON:0006601!6.20e-07!102;UBERON:0002021!6.50e-07!10;UBERON:0000411!6.50e-07!10;UBERON:0001950!6.50e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-11,54;UBERON:0001049,2.76e-11,52;UBERON:0005068,2.76e-11,52;UBERON:0006241,2.76e-11,52;UBERON:0007135,2.76e-11,52;UBERON:0002346,1.50e-10,64;UBERON:0003075,1.50e-10,64;UBERON:0007284,1.50e-10,64;UBERON:0000955,1.90e-10,47;UBERON:0006238,1.90e-10,47;UBERON:0002616,7.31e-10,46;UBERON:0003080,9.19e-10,40;UBERON:0002020,2.61e-09,34;UBERON:0002780,3.10e-09,39;UBERON:0001890,3.10e-09,39;UBERON:0006240,3.10e-09,39;UBERON:0003056,4.80e-09,49;UBERON:0001017,9.66e-09,73;UBERON:0003528,1.70e-08,29;UBERON:0002791,1.70e-08,29;UBERON:0001893,1.70e-08,29;UBERON:0001016,2.09e-08,75;UBERON:0010371,2.42e-08,73;UBERON:0002021,5.92e-07,10;UBERON:0000411,5.92e-07,10;UBERON:0001950,5.92e-07,10 | |||
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| ||
|short_description=p3@Fam57a | |||
}} | }} |
Latest revision as of 16:50, 25 September 2015
Short description: | p3@Fam57a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam57a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000127340, ENSMUST00000129853, uc007kff.1_5end |
EntrezGene: | Fam57a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.40e-11 | 54 |
neural tube | 2.76e-11 | 52 |
neural rod | 2.76e-11 | 52 |
future spinal cord | 2.76e-11 | 52 |
neural keel | 2.76e-11 | 52 |
neurectoderm | 1.50e-10 | 64 |
neural plate | 1.50e-10 | 64 |
presumptive neural plate | 1.50e-10 | 64 |
brain | 1.90e-10 | 47 |
future brain | 1.90e-10 | 47 |
regional part of brain | 7.31e-10 | 46 |
anterior neural tube | 9.19e-10 | 40 |
gray matter | 2.61e-09 | 34 |
regional part of forebrain | 3.10e-09 | 39 |
forebrain | 3.10e-09 | 39 |
future forebrain | 3.10e-09 | 39 |
pre-chordal neural plate | 4.80e-09 | 49 |
central nervous system | 9.66e-09 | 73 |
brain grey matter | 1.70e-08 | 29 |
regional part of telencephalon | 1.70e-08 | 29 |
telencephalon | 1.70e-08 | 29 |
nervous system | 2.09e-08 | 75 |
ecto-epithelium | 2.42e-08 | 73 |
occipital lobe | 5.92e-07 | 10 |
visual cortex | 5.92e-07 | 10 |
neocortex | 5.92e-07 | 10 |