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FFCP PHASE1:Mm9::chr11:75993160..75993198,+: Difference between revisions

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{{FFCP|EntrezGene=116972|HGNC=|UniProt=B7ZC15|association_with_transcript=0bp_to_ENSMUST00000127340,ENSMUST00000129853,uc007kff.1_5end|description=CAGE_peak_3_at_Fam57a_5end|id=chr11:75993160..75993198,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!4.55e-13!86;UBERON:0000153!1.45e-11!94;UBERON:0001049!2.59e-11!52;UBERON:0005068!2.59e-11!52;UBERON:0006241!2.59e-11!52;UBERON:0007135!2.59e-11!52;UBERON:0000955!4.87e-11!50;UBERON:0006238!4.87e-11!50;UBERON:0002616!1.88e-10!49;UBERON:0002346!3.33e-10!71;UBERON:0003075!3.33e-10!71;UBERON:0007284!3.33e-10!71;UBERON:0003080!1.26e-09!40;UBERON:0002020!3.58e-09!34;UBERON:0001017!4.14e-09!73;UBERON:0005743!4.14e-09!73;UBERON:0002780!4.20e-09!39;UBERON:0001890!4.20e-09!39;UBERON:0006240!4.20e-09!39;UBERON:0000033!5.83e-09!63;UBERON:0003056!6.36e-09!49;UBERON:0000073!9.17e-09!75;UBERON:0001016!9.17e-09!75;UBERON:0002791!2.31e-08!29;UBERON:0003528!2.31e-08!29;UBERON:0001893!2.31e-08!29;UBERON:0000475!2.44e-08!200;UBERON:0000477!9.66e-08!154;UBERON:0000468!1.01e-07!333;UBERON:0000922!2.75e-07!328;UBERON:0004121!6.20e-07!102;UBERON:0000924!6.20e-07!102;UBERON:0006601!6.20e-07!102;UBERON:0002021!6.50e-07!10;UBERON:0000411!6.50e-07!10;UBERON:0001950!6.50e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-11,54;UBERON:0001049,2.76e-11,52;UBERON:0005068,2.76e-11,52;UBERON:0006241,2.76e-11,52;UBERON:0007135,2.76e-11,52;UBERON:0002346,1.50e-10,64;UBERON:0003075,1.50e-10,64;UBERON:0007284,1.50e-10,64;UBERON:0000955,1.90e-10,47;UBERON:0006238,1.90e-10,47;UBERON:0002616,7.31e-10,46;UBERON:0003080,9.19e-10,40;UBERON:0002020,2.61e-09,34;UBERON:0002780,3.10e-09,39;UBERON:0001890,3.10e-09,39;UBERON:0006240,3.10e-09,39;UBERON:0003056,4.80e-09,49;UBERON:0001017,9.66e-09,73;UBERON:0003528,1.70e-08,29;UBERON:0002791,1.70e-08,29;UBERON:0001893,1.70e-08,29;UBERON:0001016,2.09e-08,75;UBERON:0010371,2.42e-08,73;UBERON:0002021,5.92e-07,10;UBERON:0000411,5.92e-07,10;UBERON:0001950,5.92e-07,10|phase1_expression=0.960893082628764,0.348975407639361,0,0.30246421130683,1.00179145989269,0.33575854382378,0.700837921786577,1.67860320474049,1.83025338797167,0.936258105287974,4.45166717386313,4.30769658574817,5.30722262786738,2.44777126773193,0.333109761815663,1.61980213911861,2.79824751251259,2.99689057090326,4.52477630898938,4.2438965179803,2.21112554392781,1.78723712161594,2.35079810225042,0.639969691173627,1.60586496747019,0,0,0.646413698057667,1.33016393619462,1.76421090831952,1.10865255327652,4.44521471421742,6.1506478758457,0,1.73310971850765,0.997407872150954,1.22501613757421,0,2.3440060335714,0,0.588231488031014,0,0,1.00717454380462,1.01376931219515,2.38610777810186,0.782391344348039,0.872100625521786,2.85592037554813,0.194429899074283,0.979904951377538,1.43752564364972,1.00669563634642,0,1.00828139742739,1.54355661621568,1.43266719969378,0.515672092277442,3.43937983461316,4.7609188134483,3.1691570175309,0.677689064138264,0.889294796111139,2.2497492932035,0,0,1.49800055259202,1.53687322128622,1.45165457231869,1.89008313664367,1.89292465216244,1.71390590642282,3.09215957332259,1.83736198822431,2.39613677545591,3.67687514644008,2.20231761998777,3.70293280447044,3.37934373163736,3.16527090552465,4.39140689291566,4.16730696445408,4.4669279840221,6.19038871034848,3.97275444219706,4.12480019663135,3.41692033917847,3.54158947068071,2.04460721999597,1.5870027622425,2.31891590961342,0.860423876981386,0,0.539703191637817,0.649776417447669,1.34408066129201,1.68533304158102,1.36344258062446,1.03914401841148,0.70667914902068,1.26759077799012,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0,2.16949371466214,11.3932668804756,3.56261133755579,0.693941307064543,2.43572382649713,2.07553947530453,2.86373017049983,1.99900802130698,2.01066546127481,1.23597483867187,2.89198713839823,4.42305275974937,0.970601099684455,1.76673214768315,0.969750506270444,0,6.44117753425404,5.65506108396329,1.78819938646014,0.718890747035522,0,0.381210681219194,6.29120685500255,13.7250180845588,4.27224797183739,9.38651329038293,8.69432554923124,5.81806524766768,6.32740925964255,0,1.8661045591514,2.77995034277042,1.89397670297827,2.08192708740326,1.37941262660084,1.62055916824814,2.71268672104287,2.04109497453984,2.69038812598185,2.52994656311268,3.62184719034622,0.431135985865684,1.13463648100692,2.46331573829528,1.7535658594206,0.834141747676794,0.696504333044333,2.88094990971121,1.59227413454795,0.702213187313235,1.54408744268829,0.284163499395593,1.65700618028402,2.11073453982987,1.98068267607116,2.3674473558521,2.55793501271625,1.54267112887378,1.62773761325285,2.68273401399619,0.700592054203017,1.48103864922132,1.64167464079095,1.86458261955468,0.730999937126662,1.97595103761946,0.805238512562231,10.9350773253346,1.74937841044784,1.65209391491899,2.3800550999719,1.91959425481711,1.85789337488351,2.57734922644187,3.22693639397348,3.11329261382818,2.09248188723815,0.949058123089023,2.63518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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=116972
|HGNC=
|TSSclassifier=NA
|UniProt=B7ZC15
|association_with_transcript=0bp_to_ENSMUST00000127340,ENSMUST00000129853,uc007kff.1_5end
|cluster_id=chr11:75993160..75993198,+
|description=CAGE_peak_3_at_Fam57a_5end
|id=chr11:75993160..75993198,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!4.55e-13!86;UBERON:0000153!1.45e-11!94;UBERON:0001049!2.59e-11!52;UBERON:0005068!2.59e-11!52;UBERON:0006241!2.59e-11!52;UBERON:0007135!2.59e-11!52;UBERON:0000955!4.87e-11!50;UBERON:0006238!4.87e-11!50;UBERON:0002616!1.88e-10!49;UBERON:0002346!3.33e-10!71;UBERON:0003075!3.33e-10!71;UBERON:0007284!3.33e-10!71;UBERON:0003080!1.26e-09!40;UBERON:0002020!3.58e-09!34;UBERON:0001017!4.14e-09!73;UBERON:0005743!4.14e-09!73;UBERON:0002780!4.20e-09!39;UBERON:0001890!4.20e-09!39;UBERON:0006240!4.20e-09!39;UBERON:0000033!5.83e-09!63;UBERON:0003056!6.36e-09!49;UBERON:0000073!9.17e-09!75;UBERON:0001016!9.17e-09!75;UBERON:0002791!2.31e-08!29;UBERON:0003528!2.31e-08!29;UBERON:0001893!2.31e-08!29;UBERON:0000475!2.44e-08!200;UBERON:0000477!9.66e-08!154;UBERON:0000468!1.01e-07!333;UBERON:0000922!2.75e-07!328;UBERON:0004121!6.20e-07!102;UBERON:0000924!6.20e-07!102;UBERON:0006601!6.20e-07!102;UBERON:0002021!6.50e-07!10;UBERON:0000411!6.50e-07!10;UBERON:0001950!6.50e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-11,54;UBERON:0001049,2.76e-11,52;UBERON:0005068,2.76e-11,52;UBERON:0006241,2.76e-11,52;UBERON:0007135,2.76e-11,52;UBERON:0002346,1.50e-10,64;UBERON:0003075,1.50e-10,64;UBERON:0007284,1.50e-10,64;UBERON:0000955,1.90e-10,47;UBERON:0006238,1.90e-10,47;UBERON:0002616,7.31e-10,46;UBERON:0003080,9.19e-10,40;UBERON:0002020,2.61e-09,34;UBERON:0002780,3.10e-09,39;UBERON:0001890,3.10e-09,39;UBERON:0006240,3.10e-09,39;UBERON:0003056,4.80e-09,49;UBERON:0001017,9.66e-09,73;UBERON:0003528,1.70e-08,29;UBERON:0002791,1.70e-08,29;UBERON:0001893,1.70e-08,29;UBERON:0001016,2.09e-08,75;UBERON:0010371,2.42e-08,73;UBERON:0002021,5.92e-07,10;UBERON:0000411,5.92e-07,10;UBERON:0001950,5.92e-07,10
|phase1_expression=0.960893082628764,0.348975407639361,0,0.30246421130683,1.00179145989269,0.33575854382378,0.700837921786577,1.67860320474049,1.83025338797167,0.936258105287974,4.45166717386313,4.30769658574817,5.30722262786738,2.44777126773193,0.333109761815663,1.61980213911861,2.79824751251259,2.99689057090326,4.52477630898938,4.2438965179803,2.21112554392781,1.78723712161594,2.35079810225042,0.639969691173627,1.60586496747019,0,0,0.646413698057667,1.33016393619462,1.76421090831952,1.10865255327652,4.44521471421742,6.1506478758457,0,1.73310971850765,0.997407872150954,1.22501613757421,0,2.3440060335714,0,0.588231488031014,0,0,1.00717454380462,1.01376931219515,2.38610777810186,0.782391344348039,0.872100625521786,2.85592037554813,0.194429899074283,0.979904951377538,1.43752564364972,1.00669563634642,0,1.00828139742739,1.54355661621568,1.43266719969378,0.515672092277442,3.43937983461316,4.7609188134483,3.1691570175309,0.677689064138264,0.889294796111139,2.2497492932035,0,0,1.49800055259202,1.53687322128622,1.45165457231869,1.89008313664367,1.89292465216244,1.71390590642282,3.09215957332259,1.83736198822431,2.39613677545591,3.67687514644008,2.20231761998777,3.70293280447044,3.37934373163736,3.16527090552465,4.39140689291566,4.16730696445408,4.4669279840221,6.19038871034848,3.97275444219706,4.12480019663135,3.41692033917847,3.54158947068071,2.04460721999597,1.5870027622425,2.31891590961342,0.860423876981386,0,0.539703191637817,0.649776417447669,1.34408066129201,1.68533304158102,1.36344258062446,1.03914401841148,0.70667914902068,1.26759077799012,1.28326477414318,0,0,0.216491041011214,1.01343946190039,0,2.16949371466214,11.3932668804756,3.56261133755579,0.693941307064543,2.43572382649713,2.07553947530453,2.86373017049983,1.99900802130698,2.01066546127481,1.23597483867187,2.89198713839823,4.42305275974937,0.970601099684455,1.76673214768315,0.969750506270444,0,6.44117753425404,5.65506108396329,1.78819938646014,0.718890747035522,0,0.381210681219194,6.29120685500255,13.7250180845588,4.27224797183739,9.38651329038293,8.69432554923124,5.81806524766768,6.32740925964255,0,1.8661045591514,2.77995034277042,1.89397670297827,2.08192708740326,1.37941262660084,1.62055916824814,2.71268672104287,2.04109497453984,2.69038812598185,2.52994656311268,3.62184719034622,0.431135985865684,1.13463648100692,2.46331573829528,1.7535658594206,0.834141747676794,0.696504333044333,2.88094990971121,1.59227413454795,0.702213187313235,1.54408744268829,0.284163499395593,1.65700618028402,2.11073453982987,1.98068267607116,2.3674473558521,2.55793501271625,1.54267112887378,1.62773761325285,2.68273401399619,0.700592054203017,1.48103864922132,1.64167464079095,1.86458261955468,0.730999937126662,1.97595103761946,0.805238512562231,10.9350773253346,1.74937841044784,1.65209391491899,2.3800550999719,1.91959425481711,1.85789337488351,2.57734922644187,3.22693639397348,3.11329261382818,2.09248188723815,0.949058123089023,2.63518327558417,3.51869292320377,1.98956472041151,1.75467678407208,1.79763881730844,1.72910439899755,1.7922714592893,0.948339504765408,1.25673363870702,2.25415471346161,2.44381593414377,1.55161989734101,1.26244475802573,2.65593455921881,1.47610147979602,2.19798218977925,2.34454611451421,1.77871576252289,2.50267658574141,2.16214894624523,2.69834534861824,4.26006254915856,2.65294875727659,3.05551022137704,3.74004978686054,1.78348749452539,2.74561413188081,4.31304619582064,0.744281895337007,1.5601883655728,1.51547326768267,2.69096120282868,1.4473305640901,2.40179147216586,2.08440552947533,1.62964976442026,2.37643120085263,3.75504397261603,3.01511263395268,2.14239276797412,1.56106918286239,1.57635144106191,1.99318220683897,1.75400245523236,2.29408640602033,2.07221978239075,1.01254341007058,1.50791283939272,1.63171705145613,1.47529281905711,0.827810238914197,5.29816946959713,2.69586879162067,0.655739781506702,1.76729649043061,1.57754109708128,1.95219372148319,3.87762115919038,2.15071918157297,1.78238939265915,1.13230612315533,2.02405350837447,0.876767573733936,0.790575555893047,13.8168166061377,1.41940085208269,1.78065603667255,0.651547837414304,2.47455184458803,5.30980553359851,1.94224508923985,2.72091201268276,3.20628635585027,2.65771703592696,1.84461088766356,1.29214146584111,2.90826983582004,2.85197902707777,4.10847785316561,2.10837217149998,2.06271086496374,8.85142974959849,2.16073312837572,2.58717367565509,1.92903331528433,2.48276327099183,2.85390108163313,2.13913726782757,1.2178597964584,3.75474732901937,5.50763384245932,0.661585194164886,3.79238381765404,1.13025098687134,1.93001359770099,2.02932984805332,2.29797259643086,1.7488850197791,5.93360966433631,4.27177201994632,0.82554747185289,2.77791791054568,2.0720530270516,3.55404992074665,2.0590035588587,0,0.279902904647316,0.276399947608848,2.86401185404534,1.89801596148681,2.43983360552218,2.37611749807963,2.92723614420256,2.40198820120795,1.61837215661785,1.57041565878138,0.523511883968059,1.8146096260851,2.4853572523477,1.12738587736838,1.49516546043979,1.32366792365678,0.777804753376191,1.54991788173277,2.87225413334323,0.704143431874524,0.781226309063701,1.15345278868282,3.38217769156408,3.45636007509439,6.95224465381992,4.45995473638361,3.3894615864393,2.85825810551149,3.93858730468459,4.37098980518783,4.56742708175882,4.72606486958647,4.2405908978222,3.42930629947499,3.83139503519994,4.28814675254911,3.46362629905186,5.14258369598903,0.680191150845634,2.44184548711471,2.24284641523689,1.00730769818447,2.89784391048286,2.43987218086537,1.64836461840539,4.07299920250225,4.01257683228291,6.21227026878773,6.44455331110048,3.43737308063638,6.8741272937475,6.16574267793578,9.82012066606611,3.37511250115903,10.8077088773813,7.25027854374727,9.83744592328458,1.24544817101012,1.99512436700516,2.39027048055788,3.40349403895612,2.09613162627982,2.5738091183002,2.889207461421,2.67845574410562,2.56735367673452,3.28506375292937,2.78827229879264,2.45214243801899,2.34103768674706,2.94515701062399,3.0440798546475,1.90517476513229,2.0859178670074,2.70072908649187,0.824171801606613,2.50238164228475,2.05721551431249,2.30718548007139,2.14592570952589,3.34296758254356,2.63506265162926,2.62305284464197,2.19513567447327,3.15683653725411,2.17286582153379,0.561142271657738,1.77952527186261,2.06859412988683,4.91077251803627,1.85924209423159,3.2794123866794,3.99696924700713,2.57324769289949,0.859484216193193,0.57386499620653,0.882365676478062,3.47801753430632
|short_description=p3@Fam57a
}}

Latest revision as of 16:50, 25 September 2015

Short description:p3@Fam57a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam57a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000127340, ENSMUST00000129853, uc007kff.1_5end
EntrezGene:Fam57a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam57a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.94
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.31
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.01
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C33.44
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.19
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F91.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.69
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F52.86
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H71.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.71
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I91.98
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.56
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.86
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.58
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.79
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.26
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D52.66
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D74.26
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G88.85
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C42.30
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H13.55
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I44.46
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G44.37
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.24
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E43.83
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G25.14
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.25
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.84
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F93.28
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.40e-1154
neural tube2.76e-1152
neural rod2.76e-1152
future spinal cord2.76e-1152
neural keel2.76e-1152
neurectoderm1.50e-1064
neural plate1.50e-1064
presumptive neural plate1.50e-1064
brain1.90e-1047
future brain1.90e-1047
regional part of brain7.31e-1046
anterior neural tube9.19e-1040
gray matter2.61e-0934
regional part of forebrain3.10e-0939
forebrain3.10e-0939
future forebrain3.10e-0939
pre-chordal neural plate4.80e-0949
central nervous system9.66e-0973
brain grey matter1.70e-0829
regional part of telencephalon1.70e-0829
telencephalon1.70e-0829
nervous system2.09e-0875
ecto-epithelium2.42e-0873
occipital lobe5.92e-0710
visual cortex5.92e-0710
neocortex5.92e-0710
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