FFCP PHASE1:Mm9::chr14:120877576..120877614,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:120877576..120877614,+
|short_description=p2@Rap2a
|description=CAGE_peak_2_at_Rap2a_5end
|association_with_transcript=-51bp_to_ENSMUST00000062117_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76108 | |EntrezGene=76108 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80ZJ1 | |UniProt=Q80ZJ1 | ||
|association_with_transcript=-51bp_to_ENSMUST00000062117_5end | |||
|cluster_id=chr14:120877576..120877614,+ | |||
|description=CAGE_peak_2_at_Rap2a_5end | |||
|id=chr14:120877576..120877614,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.04e-11!23;CL:0000337!6.04e-11!23;CL:0000221!2.13e-09!44;CL:0000133!2.13e-09!44;CL:0000393!3.45e-09!39;CL:0000211!3.45e-09!39;CL:0000055!4.43e-09!50;CL:0002319!7.65e-09!43;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.96e-11,23;CL:0000337,5.96e-11,23;CL:0000221,2.11e-09,44;CL:0000133,2.11e-09,44;CL:0000393,3.42e-09,39;CL:0000211,3.42e-09,39;CL:0002319,7.57e-09,43;CL:0000540,1.12e-08,33;CL:0000047,1.12e-08,33;CL:0000031,1.12e-08,33;CL:0000404,1.12e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.68e-22!75;UBERON:0001016!7.68e-22!75;UBERON:0001017!9.30e-21!73;UBERON:0005743!9.30e-21!73;UBERON:0001049!1.71e-19!52;UBERON:0005068!1.71e-19!52;UBERON:0006241!1.71e-19!52;UBERON:0007135!1.71e-19!52;UBERON:0000955!2.65e-18!50;UBERON:0006238!2.65e-18!50;UBERON:0002616!1.10e-17!49;UBERON:0002020!1.91e-17!34;UBERON:0004121!2.84e-17!102;UBERON:0000924!2.84e-17!102;UBERON:0006601!2.84e-17!102;UBERON:0002346!1.85e-16!71;UBERON:0003075!1.85e-16!71;UBERON:0007284!1.85e-16!71;UBERON:0003080!4.71e-16!40;UBERON:0000033!1.30e-15!63;UBERON:0002780!1.68e-15!39;UBERON:0001890!1.68e-15!39;UBERON:0006240!1.68e-15!39;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0003056!6.00e-14!49;UBERON:0000025!8.05e-14!114;UBERON:0004111!6.05e-12!122;UBERON:0000956!4.96e-11!21;UBERON:0001869!4.96e-11!21;UBERON:0000203!4.96e-11!21;UBERON:0002619!1.95e-09!17;UBERON:0002048!6.94e-08!14;UBERON:0000117!6.94e-08!14;UBERON:0000171!6.94e-08!14;UBERON:0000170!6.94e-08!14;UBERON:0005597!6.94e-08!14;UBERON:0000118!6.94e-08!14;UBERON:0002021!2.56e-07!10;UBERON:0000411!2.56e-07!10;UBERON:0001950!2.56e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.45e-22,75;UBERON:0001017,9.04e-21,73;UBERON:0000073,1.41e-20,54;UBERON:0001049,1.67e-19,52;UBERON:0005068,1.67e-19,52;UBERON:0006241,1.67e-19,52;UBERON:0007135,1.67e-19,52;UBERON:0002020,1.87e-17,34;UBERON:0004121,2.78e-17,95;UBERON:0000924,2.78e-17,95;UBERON:0006601,2.78e-17,95;UBERON:0002346,7.18e-17,64;UBERON:0003075,7.18e-17,64;UBERON:0007284,7.18e-17,64;UBERON:0000955,8.63e-17,47;UBERON:0006238,8.63e-17,47;UBERON:0010314,2.13e-16,92;UBERON:0002616,3.49e-16,46;UBERON:0003080,4.61e-16,40;UBERON:0002780,1.64e-15,39;UBERON:0001890,1.64e-15,39;UBERON:0006240,1.64e-15,39;UBERON:0010371,1.73e-15,73;UBERON:0003528,1.18e-14,29;UBERON:0002791,1.18e-14,29;UBERON:0001893,1.18e-14,29;UBERON:0003056,5.89e-14,49;UBERON:0000025,1.01e-13,114;UBERON:0004111,7.95e-12,122;UBERON:0000956,4.89e-11,21;UBERON:0001869,4.89e-11,21;UBERON:0000203,4.89e-11,21;UBERON:0002619,1.93e-09,17;UBERON:0002048,6.88e-08,14;UBERON:0000117,6.88e-08,14;UBERON:0000171,6.88e-08,14;UBERON:0000170,6.88e-08,14;UBERON:0005597,6.88e-08,14;UBERON:0000118,6.88e-08,14;UBERON:0002021,2.54e-07,10;UBERON:0000411,2.54e-07,10;UBERON:0001950,2.54e-07,10 | |||
|phase1_expression=5.12476310735341,1.74487703819681,3.63999391511629,3.0246421130683,2.50447864973174,2.18243053485457,2.33612640595526,1.16210991097419,0.985521055061667,0.234064526321993,0.171217968225505,0.239316476986009,0.684802919724823,1.39872643870396,0,1.01237633694913,0.699561878128147,0.315462165358238,0.959801035240171,1.27316895539409,5.27268398936633,1.39007331681239,1.30599894569468,2.07990149631429,1.60586496747019,3.44539178469012,1.29228598847722,2.80112602491656,1.14014051673824,4.28451220591882,1.55211357458713,0,0,0,1.1554064790051,1.49611180822643,1.42918549383658,5.85944283031671,8.5946887897618,5.23523743973798,12.3528612486513,8.87959130445979,8.25367600152961,6.54663453473002,7.19776211658553,12.2976323948327,1.56478268869608,2.8343270329458,4.17403747195497,5.8328969722285,4.05960622713551,2.87505128729943,0.503347818173209,0.725362142011344,1.68046899571232,2.57259436035947,5.15760191889762,3.6097046459421,6.67644320836673,4.7609188134483,8.23980824558033,4.06613438482959,2.66788438833342,5.84934816232909,5.93319817540185,6.3943210345149,7.49000276296012,7.30014780110954,7.77672092313582,7.56033254657468,6.52007380189284,14.8538511889978,13.2521124570968,7.10446635446733,10.8305382250607,11.0306254393203,7.70811166995721,12.6410464704336,11.6740965274745,8.83638127792299,11.3444678066988,7.8137005583514,12.0048689570594,10.6924895906019,14.3630352910202,12.0797720044204,12.8134512719193,8.57437450796383,11.7375599666435,9.67315969366855,2.89864488701678,2.58127163094416,0.679971333707751,1.07940638327563,3.24888208723835,0.896053774194671,2.10666630197628,2.89731548382698,2.07828803682295,2.47337702157238,19.0138616698519,6.41632387071589,0,0,1.73192832808971,2.02687892380079,2.52762222507392,1.48439043634778,0.776813650941515,2.82040064223167,5.37804512975021,3.95805121805784,5.5347719341454,7.08396410597326,2.58695155698551,3.64433114856059,2.22475470960936,1.15679485535929,3.5384422077995,4.20593809863264,3.3126227769059,0,1.86391761218122,5.85561594023094,7.95897485891129,1.02182822083437,1.7972268675888,0,3.93917703926501,12.1330417917906,6.40500843946077,9.92669381691629,16.8609590586508,25.3158302757027,10.5971902725376,14.9261962022337,6.41587992256993,2.98576729464223,1.76905930903572,1.47309299120532,3.6433724029557,4.36813998423599,3.78130472591233,3.76762044589288,4.83059143974428,3.45907044769094,5.99691037182265,4.13925393182425,1.94011193639558,3.02569728268511,1.40760899331159,3.28793598641362,3.33656699070717,4.87553033131033,2.88094990971121,4.97585667046233,0.702213187313235,1.02939162845886,0.568326998791185,4.97101854085205,4.45599513964083,4.68161359798639,4.97163944728941,5.1158700254325,4.31947916084659,4.41814495025775,4.02410102099429,2.6856028744449,6.41783414662574,5.25335885053105,4.45878452502207,4.9707995724613,2.85415149878366,2.81833479396781,15.7717461423095,12.3485534855141,0.660837565967596,0.264450566663544,1.91959425481711,3.94802342162745,5.28356591420583,4.84040459096022,4.66993892074228,6.46767128782701,1.89811624617805,2.79988223030818,3.51869292320377,1.98956472041151,2.53453313254856,2.69645822596266,2.59365659849633,1.99141273254367,4.93136542478012,3.88444942873078,2.25415471346161,3.66572390121566,4.46090720485539,4.62896411276103,5.24863258131335,4.42830443938806,2.98297582898612,2.71473760627961,2.37162101669719,1.66845105716094,1.57247196090562,1.12431056192427,1.42002084971952,2.894125917029,2.03700681425136,4.31544206176216,0.972811360650212,1.64736847912849,0,2.60498663367952,2.49630138491648,4.04126204715379,1.25578189465339,0.964887042726734,8.68339993783042,4.54779388249163,9.77789858652155,8.48725428875941,7.97946844180907,14.9080569123216,14.2826184531608,14.8301572371927,18.6009470045305,14.6166695168191,20.7291199254733,14.5838350097007,8.63424909329478,8.24499633914616,4.52373851817817,3.80733978673097,3.93411418415229,2.75936746304733,9.15138362930414,11.2523219128515,6.22952792431367,1.76729649043061,2.52406575533005,3.12350995437311,5.60100834105277,3.58453196928828,4.23317480756549,3.96307143104365,3.23848561339915,2.63030272120181,5.92931666919785,14.4594592389813,3.12268187458191,4.62970569534864,4.0721739838394,5.27904393512113,2.65490276679926,2.91336763385978,3.62788268357701,3.77210159511796,2.36241514304618,5.22639751504677,5.42699415653264,1.81766864738753,1.42598951353889,0.632073515871632,2.10837217149998,0,5.10659408630682,4.50152735078276,3.88076051348264,5.78709994585299,4.25616560741457,4.45922044005176,6.08831376227848,5.48036908406279,3.75474732901937,2.75381692122966,0.882113592219848,1.97863503529776,1.93757312035087,4.644095219468,3.70054266409723,3.28281799490123,3.20628920292836,9.6421157045465,1.02522528478712,5.98521917093345,4.07427960213366,2.44878994106098,1.50363650493128,1.60144721244566,3.22959016988325,1.95932033253121,3.17859939750175,0.954670618015114,2.37251995185852,4.87966721104437,5.94029374519907,4.18176592028937,2.18362563746178,3.64133735239016,3.38879168473877,2.3558034778562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| ||
|short_description=p2@Rap2a | |||
}} | }} |
Latest revision as of 16:40, 25 September 2015
Short description: | p2@Rap2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rap2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -51bp_to_ENSMUST00000062117_5end |
EntrezGene: | Rap2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.96e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.96e-11 | 23 |
ectodermal cell | 2.11e-09 | 44 |
neurectodermal cell | 2.11e-09 | 44 |
electrically responsive cell | 3.42e-09 | 39 |
electrically active cell | 3.42e-09 | 39 |
neural cell | 7.57e-09 | 43 |
neuron | 1.12e-08 | 33 |
neuronal stem cell | 1.12e-08 | 33 |
neuroblast | 1.12e-08 | 33 |
electrically signaling cell | 1.12e-08 | 33 |