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FFCP PHASE1:Mm9::chr14:120877544..120877573,+: Difference between revisions

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(Created page with "{{FFCP |id=chr14:120877544..120877573,+ |short_description=p3@Rap2a |description=CAGE_peak_3_at_Rap2a_5end |association_with_transcript=-92bp_to_ENSMUST00000062117_5end |...")
 
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{{FFCP
{{FFCP
|id=chr14:120877544..120877573,+
|DHSsupport=NA
|short_description=p3@Rap2a
|DPIdataset=NA
|description=CAGE_peak_3_at_Rap2a_5end
|association_with_transcript=-92bp_to_ENSMUST00000062117_5end
|EntrezGene=76108
|EntrezGene=76108
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q80ZJ1
|UniProt=Q80ZJ1
|association_with_transcript=-92bp_to_ENSMUST00000062117_5end
|cluster_id=chr14:120877544..120877573,+
|description=CAGE_peak_3_at_Rap2a_5end
|id=chr14:120877544..120877573,+
|ontology_enrichment_celltype=CL:0000117!3.74e-11!23;CL:0000337!3.74e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-12,23;CL:0000337,2.00e-12,23;CL:0000540,1.06e-07,33;CL:0000047,1.06e-07,33;CL:0000031,1.06e-07,33;CL:0000404,1.06e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!5.53e-21!52;UBERON:0005068!5.53e-21!52;UBERON:0006241!5.53e-21!52;UBERON:0007135!5.53e-21!52;UBERON:0000033!1.09e-20!63;UBERON:0000955!2.47e-20!50;UBERON:0006238!2.47e-20!50;UBERON:0002616!1.23e-19!49;UBERON:0000073!9.64e-19!75;UBERON:0001016!9.64e-19!75;UBERON:0001017!1.61e-18!73;UBERON:0005743!1.61e-18!73;UBERON:0004121!2.09e-18!102;UBERON:0000924!2.09e-18!102;UBERON:0006601!2.09e-18!102;UBERON:0002346!4.89e-18!71;UBERON:0003075!4.89e-18!71;UBERON:0007284!4.89e-18!71;UBERON:0003056!4.12e-16!49;UBERON:0002020!4.68e-16!34;UBERON:0003080!6.14e-16!40;UBERON:0002780!2.90e-15!39;UBERON:0001890!2.90e-15!39;UBERON:0006240!2.90e-15!39;UBERON:0002791!1.07e-13!29;UBERON:0003528!1.07e-13!29;UBERON:0001893!1.07e-13!29;UBERON:0000025!7.93e-10!114;UBERON:0004111!1.39e-09!122;UBERON:0000956!2.17e-09!21;UBERON:0001869!2.17e-09!21;UBERON:0000203!2.17e-09!21;UBERON:0007811!1.26e-08!86;UBERON:0000153!5.25e-08!94;UBERON:0002619!9.23e-08!17;UBERON:0002021!2.52e-07!10;UBERON:0000411!2.52e-07!10;UBERON:0001950!2.52e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.12e-24,54;UBERON:0001049,9.36e-23,52;UBERON:0005068,9.36e-23,52;UBERON:0006241,9.36e-23,52;UBERON:0007135,9.36e-23,52;UBERON:0001016,4.06e-21,75;UBERON:0001017,7.26e-21,73;UBERON:0002346,3.26e-20,64;UBERON:0003075,3.26e-20,64;UBERON:0007284,3.26e-20,64;UBERON:0000955,5.44e-20,47;UBERON:0006238,5.44e-20,47;UBERON:0004121,5.55e-20,95;UBERON:0000924,5.55e-20,95;UBERON:0006601,5.55e-20,95;UBERON:0010371,1.73e-19,73;UBERON:0002616,3.16e-19,46;UBERON:0002020,1.58e-17,34;UBERON:0003080,2.69e-17,40;UBERON:0003056,4.93e-17,49;UBERON:0002780,1.54e-16,39;UBERON:0001890,1.54e-16,39;UBERON:0006240,1.54e-16,39;UBERON:0010314,1.62e-15,92;UBERON:0003528,7.35e-15,29;UBERON:0002791,7.35e-15,29;UBERON:0001893,7.35e-15,29;UBERON:0000956,5.16e-10,21;UBERON:0001869,5.16e-10,21;UBERON:0000203,5.16e-10,21;UBERON:0000025,1.01e-09,114;UBERON:0004111,2.16e-09,122;UBERON:0002619,3.54e-08,17;UBERON:0002021,4.30e-08,10;UBERON:0000411,4.30e-08,10;UBERON:0001950,4.30e-08,10
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|phase1_expression=1.76163731815273,0.348975407639361,0,0.30246421130683,0,0,0.467225281191051,0.129123323441576,0,0,0.171217968225505,0.0797721589953364,0.171200729931206,0.34968160967599,0.333109761815663,0,0,0.157731082679119,0.548457734422955,0,1.36069264241712,0.496454756004426,0.261199789138935,0.319984845586813,0.68822784320151,0,0,0.646413698057667,0,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0.408338712524738,1.67412652294763,0.7813353445238,0.523523743973798,1.17646297606203,0.683045484958446,1.45653105909346,0.755380907853464,0.912392380975631,1.28482726513177,1.56478268869608,0.65407546914134,0.659058548203415,0.58328969722285,1.39986421625363,0,0,0,0,0.514518872071894,1.43266719969378,0.515672092277442,2.63011399117477,1.5869729378161,3.80298842103708,1.69422266034566,0.889294796111139,0,3.9554654502679,2.1314403448383,1.49800055259202,0.768436610643109,3.31806759387129,1.62007125998029,2.3135745748652,2.57085885963423,4.19650227808066,1.83736198822431,1.72521847832825,2.75765635983006,4.40463523997555,4.97980618532232,2.76491759861238,4.61602007055678,3.29355516968675,4.16730696445408,3.62937898701795,3.37657566019008,2.75036845998258,2.94628585473668,2.13557521198654,2.60959224155421,1.81742863999642,1.13357340160178,0,0,0,0,0.649776417447669,0.448026887097336,0.842666520790511,1.87473354835864,0.779358013808606,1.06001872353102,1.97180787687353,0,0,0,0.432982082022428,0.506719730950197,1.01104889002957,0.91347103775248,0.517875767294343,0.890652834388949,1.21439728736295,1.21786191324856,1.84492397804847,0.753613202763113,1.05829836422134,1.0053327306374,0.988779870937496,0.144599356919912,0.884610551949874,1.29413479957927,0.441683036920787,0.484875253135222,0,3.80615036115011,3.97948742945565,0,0.239630249011841,0,0.254140454146129,6.5907881338122,5.03250663100489,3.39266750704734,9.38651329038293,10.4843337505436,2.90903262383384,4.54275536589721,2.03678727700633,0.870848794270651,0.505445516867349,1.47309299120532,0.780722657776222,1.83921683546778,1.0803727788321,0.60281927134286,1.56483948048054,1.7935920839879,2.34254311399322,1.81092359517311,1.07783996466421,1.70195472151037,0.703804496655795,0.876782929710299,0.834141747676794,0.696504333044333,1.23469281844766,1.19420560091096,0,0,0,1.24275463521301,1.87620847984877,1.2604344302271,2.13070262026689,0.393528463494808,0.617068451549513,0.465067889500816,0.268273401399619,1.28441876603886,1.6455984991348,0.985004784474571,1.29710095273369,0.730999937126662,0.878200461164203,0.805238512562231,6.09840850835969,4.52780294468852,0.330418782983798,0.528901133327089,1.2797295032114,0.928946687441754,0.515469845288373,1.21010114774006,0.667134131534611,0.190225626112559,0,0.494096864172033,1.00534083520108,1.98956472041151,0.38992817423824,0.898819408654221,1.08069024937347,0.398282546508734,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,1.33258057791605,1.26473074248515,1.62371162777562,1.56998727841375,0.987177311374404,0.296452627087149,0.83422552858047,0.393117990226406,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0.162135226775035,0.823684239564244,1.43768206527355,0.372140947668503,0,0.505157755894224,0.538192240565737,1.4473305640901,1.84753190166605,0.37898282354097,2.60743962307241,1.69745085775188,1.17345124144251,3.1826188913945,2.38043640886014,3.51240566144038,2.52216230569906,3.76489972402917,3.82691444777969,1.96635977658886,2.24490476425664,0.867894351489069,0,1.08781136763742,0,0.827810238914197,4.0137647496948,5.39173758324135,1.47541450839008,1.76729649043061,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,1.78238939265915,0.283076530788832,1.61924280669958,0.292255857911312,0.395287777946524,6.10510501201433,1.41940085208269,2.49291845134157,1.30309567482861,0.989820737835213,0,1.21390318077491,2.11626489875326,1.32023555829129,1.77181135728464,0.307435147943927,1.03371317267288,1.45413491791002,0.356497378384721,0.948110273807448,0,2.06271086496374,1.70219802876894,0.540183282093931,1.29358683782755,2.57204442037911,1.24138163549592,2.14042581122485,2.63278432963394,1.2178597964584,0.704015124191131,2.54198485036584,0.220528398054962,1.15420377059036,1.13025098687134,1.44751019827574,1.3130957840345,1.14898629821543,0.291480836629851,4.26478194624172,1.02522528478712,0.82554747185289,0.740778109478847,0.188368457004691,0.410082683163076,0.228778173206523,0.339956859987711,0.139951452323658,0.138199973804424,0.954670618015114,1.58167996790568,1.01659733563424,1.08005340821801,0.627264888043406,0.87345025498471,0.809186078308924,0.826534557253359,0.785267825952089,0.777689839750757,0.621339313086926,0.56369293868419,1.79419855252775,1.98550188548517,1.75006069509643,0.645799117388655,2.36538575687089,0.821500670520278,2.3436789271911,2.51662426621706,0.966336483304024,0.576060012515731,0.316011120628178,1.21635129174099,1.02710957164827,0.77952493786677,0.716106782669926,0.198681354781265,0.480781798079875,0.590758108698309,0.302899349844443,0.533447646584999,0.302478555410522,0.779663045918019,0.192423683280659,0.818138315270983,1.36038230169127,0,0.538283139656854,2.18250001273302,0.579568782096571,0.563047426353546,1.28206136987086,1.71494703263253,0.501572104035363,6.21227026878773,5.52390283808612,4.01026859407578,8.42080593484069,2.05524755931193,5.2877572817279,6.75022500231806,7.20513925158753,4.98456649882625,3.10656187051092,1.55681021376265,1.19707462020309,1.19513524027894,1.94485373654635,1.25767897576789,1.83843508450014,1.33348036680969,1.64828045791115,1.60459604795908,1.76888048234658,1.2673964994512,0.943131706930381,1.03005658216871,1.15245274328765,1.09127391015665,1.90517476513229,1.0429589335037,1.15745532278223,2.06042950401653,1.03039244094078,0.342869252385415,1.24233064311536,1.43061713968393,1.16277133305863,0.752875043322645,1.01537529470012,1.82927972872773,1.05227884575137,2.30866993537965,0.561142271657738,1.30498519936592,2.06859412988683,0.818462086339379,1.23949472948773,1.15743966588685,0.749431733813838,1.16965804222704,1.71896843238639,1.14772999241306,1.54413993383661,0.695603506861264
|short_description=p3@Rap2a
}}
}}

Latest revision as of 16:39, 25 September 2015

Short description:p3@Rap2a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rap2a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -92bp_to_ENSMUST00000062117_5end
EntrezGene:Rap2a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rap2a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D59.39
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E86.10
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.33
kidney, neonate N10.CNhs11206.758-6D51.26
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F82.61
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.11
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F62.14
pituitary gland, embryo E17.CNhs11039.1265-44F52.63
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.00e-1223
neuroblast (sensu Vertebrata)2.00e-1223
neuron1.06e-0733
neuronal stem cell1.06e-0733
neuroblast1.06e-0733
electrically signaling cell1.06e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.12e-2454
neural tube9.36e-2352
neural rod9.36e-2352
future spinal cord9.36e-2352
neural keel9.36e-2352
nervous system4.06e-2175
central nervous system7.26e-2173
neurectoderm3.26e-2064
neural plate3.26e-2064
presumptive neural plate3.26e-2064
brain5.44e-2047
future brain5.44e-2047
ectoderm-derived structure5.55e-2095
ectoderm5.55e-2095
presumptive ectoderm5.55e-2095
ecto-epithelium1.73e-1973
regional part of brain3.16e-1946
gray matter1.58e-1734
anterior neural tube2.69e-1740
pre-chordal neural plate4.93e-1749
regional part of forebrain1.54e-1639
forebrain1.54e-1639
future forebrain1.54e-1639
structure with developmental contribution from neural crest1.62e-1592
brain grey matter7.35e-1529
regional part of telencephalon7.35e-1529
telencephalon7.35e-1529
cerebral cortex5.16e-1021
cerebral hemisphere5.16e-1021
pallium5.16e-1021
tube1.01e-09114
anatomical conduit2.16e-09122
regional part of cerebral cortex3.54e-0817
occipital lobe4.30e-0810
visual cortex4.30e-0810
neocortex4.30e-0810
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