FFCP PHASE1:Mm9::chr3:69120779..69120791,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:69120779..69120791,+
|short_description=p3@Ppm1l
|description=CAGE_peak_3_at_Ppm1l_5end
|association_with_transcript=0bp_to_ENSMUST00000029355_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=242083 | |EntrezGene=242083 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BHN0 | |UniProt=Q8BHN0 | ||
|association_with_transcript=0bp_to_ENSMUST00000029355_5end | |||
|cluster_id=chr3:69120779..69120791,+ | |||
|description=CAGE_peak_3_at_Ppm1l_5end | |||
|id=chr3:69120779..69120791,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.83e-12!50;CL:0002319!2.20e-11!43;CL:0000393!2.73e-11!39;CL:0000211!2.73e-11!39;CL:0000540!3.22e-11!33;CL:0000047!3.22e-11!33;CL:0000031!3.22e-11!33;CL:0000404!3.22e-11!33;CL:0000221!6.57e-11!44;CL:0000133!6.57e-11!44;CL:0000117!5.20e-10!23;CL:0000337!5.20e-10!23;CL:0002321!6.88e-08!70;CL:0000220!6.88e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-12,43;CL:0000221,5.17e-12,44;CL:0000133,5.17e-12,44;CL:0000540,9.19e-12,33;CL:0000047,9.19e-12,33;CL:0000031,9.19e-12,33;CL:0000404,9.19e-12,33;CL:0000393,9.61e-12,39;CL:0000211,9.61e-12,39;CL:0000117,3.12e-11,23;CL:0000337,3.12e-11,23;CL:0002321,4.97e-09,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.10e-15!75;UBERON:0001016!2.10e-15!75;UBERON:0001017!1.45e-14!73;UBERON:0005743!1.45e-14!73;UBERON:0001049!1.80e-09!52;UBERON:0005068!1.80e-09!52;UBERON:0006241!1.80e-09!52;UBERON:0007135!1.80e-09!52;UBERON:0000955!2.18e-09!50;UBERON:0006238!2.18e-09!50;UBERON:0004121!4.54e-09!102;UBERON:0000924!4.54e-09!102;UBERON:0006601!4.54e-09!102;UBERON:0002616!5.35e-09!49;UBERON:0000025!6.48e-09!114;UBERON:0004111!1.64e-08!122;UBERON:0002020!3.00e-08!34;UBERON:0000033!1.57e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.67e-16,75;UBERON:0001017,2.82e-15,73;UBERON:0004121,3.05e-12,95;UBERON:0000924,3.05e-12,95;UBERON:0006601,3.05e-12,95;UBERON:0000073,1.18e-10,54;UBERON:0001049,4.40e-09,52;UBERON:0005068,4.40e-09,52;UBERON:0006241,4.40e-09,52;UBERON:0007135,4.40e-09,52;UBERON:0002020,7.04e-08,34;UBERON:0000955,2.18e-07,47;UBERON:0006238,2.18e-07,47;UBERON:0002346,4.51e-07,64;UBERON:0003075,4.51e-07,64;UBERON:0007284,4.51e-07,64;UBERON:0002616,6.98e-07,46 | |||
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| ||
|short_description=p3@Ppm1l | |||
}} | }} |
Latest revision as of 16:33, 25 September 2015
Short description: | p3@Ppm1l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ppm1l_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000029355_5end |
EntrezGene: | Ppm1l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.69e-12 | 43 |
ectodermal cell | 5.17e-12 | 44 |
neurectodermal cell | 5.17e-12 | 44 |
neuron | 9.19e-12 | 33 |
neuronal stem cell | 9.19e-12 | 33 |
neuroblast | 9.19e-12 | 33 |
electrically signaling cell | 9.19e-12 | 33 |
electrically responsive cell | 9.61e-12 | 39 |
electrically active cell | 9.61e-12 | 39 |
CNS neuron (sensu Vertebrata) | 3.12e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.12e-11 | 23 |
embryonic cell | 4.97e-09 | 70 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.67e-16 | 75 |
central nervous system | 2.82e-15 | 73 |
ectoderm-derived structure | 3.05e-12 | 95 |
ectoderm | 3.05e-12 | 95 |
presumptive ectoderm | 3.05e-12 | 95 |
regional part of nervous system | 1.18e-10 | 54 |
neural tube | 4.40e-09 | 52 |
neural rod | 4.40e-09 | 52 |
future spinal cord | 4.40e-09 | 52 |
neural keel | 4.40e-09 | 52 |
gray matter | 7.04e-08 | 34 |
brain | 2.18e-07 | 47 |
future brain | 2.18e-07 | 47 |
neurectoderm | 4.51e-07 | 64 |
neural plate | 4.51e-07 | 64 |
presumptive neural plate | 4.51e-07 | 64 |
regional part of brain | 6.98e-07 | 46 |