FFCP PHASE1:Mm9::chr2:127347067..127347093,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:127347067..127347093,- to FFCP PHASE1:Mm9::chr2:127347067..127347093,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=56461 | |EntrezGene=56461 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AHT3,Q9QXT8,Q3YAB0 | |UniProt=A2AHT3,Q9QXT8,Q3YAB0 | ||
|association_with_transcript=12bp_to_ENSMUST00000028850,ENSMUST00000103215,NM_019789,uc008mfm.1,uc008mfn.1_5end | |||
|cluster_id=chr2:127347067..127347093,- | |||
|description=CAGE_peak_1_at_Kcnip3_5end | |||
|id=chr2:127347067..127347093,- | |||
|ontology_enrichment_celltype=CL:0000540!6.18e-14!33;CL:0000047!6.18e-14!33;CL:0000031!6.18e-14!33;CL:0000404!6.18e-14!33;CL:0002319!4.78e-13!43;CL:0000221!1.21e-12!44;CL:0000133!1.21e-12!44;CL:0000117!1.72e-11!23;CL:0000337!1.72e-11!23;CL:0000393!7.06e-09!39;CL:0000211!7.06e-09!39;CL:0000055!2.91e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.07e-16,33;CL:0000047,2.07e-16,33;CL:0000031,2.07e-16,33;CL:0000404,2.07e-16,33;CL:0002319,2.85e-14,43;CL:0000221,1.37e-13,44;CL:0000133,1.37e-13,44;CL:0000117,3.10e-13,23;CL:0000337,3.10e-13,23;CL:0000393,1.01e-11,39;CL:0000211,1.01e-11,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-32!73;UBERON:0005743!1.19e-32!73;UBERON:0000073!2.00e-31!75;UBERON:0001016!2.00e-31!75;UBERON:0004121!5.82e-27!102;UBERON:0000924!5.82e-27!102;UBERON:0006601!5.82e-27!102;UBERON:0001049!7.77e-24!52;UBERON:0005068!7.77e-24!52;UBERON:0006241!7.77e-24!52;UBERON:0007135!7.77e-24!52;UBERON:0000955!8.23e-23!50;UBERON:0006238!8.23e-23!50;UBERON:0002346!9.48e-23!71;UBERON:0003075!9.48e-23!71;UBERON:0007284!9.48e-23!71;UBERON:0002616!3.68e-22!49;UBERON:0000033!3.84e-22!63;UBERON:0003056!6.96e-19!49;UBERON:0003080!2.11e-18!40;UBERON:0002780!9.10e-18!39;UBERON:0001890!9.10e-18!39;UBERON:0006240!9.10e-18!39;UBERON:0002020!1.20e-17!34;UBERON:0002791!4.89e-15!29;UBERON:0003528!4.89e-15!29;UBERON:0001893!4.89e-15!29;UBERON:0000956!1.49e-11!21;UBERON:0001869!1.49e-11!21;UBERON:0000203!1.49e-11!21;UBERON:0002619!1.64e-09!17;UBERON:0007811!7.44e-09!86;UBERON:0002021!2.99e-08!10;UBERON:0000411!2.99e-08!10;UBERON:0001950!2.99e-08!10;UBERON:0000153!4.06e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.41e-37,73;UBERON:0001016,1.11e-35,75;UBERON:0004121,9.69e-32,95;UBERON:0000924,9.69e-32,95;UBERON:0006601,9.69e-32,95;UBERON:0002346,2.21e-28,64;UBERON:0003075,2.21e-28,64;UBERON:0007284,2.21e-28,64;UBERON:0000073,3.01e-28,54;UBERON:0001049,6.90e-27,52;UBERON:0005068,6.90e-27,52;UBERON:0006241,6.90e-27,52;UBERON:0007135,6.90e-27,52;UBERON:0010371,9.54e-24,73;UBERON:0000955,1.46e-23,47;UBERON:0006238,1.46e-23,47;UBERON:0002616,8.16e-23,46;UBERON:0003080,3.34e-20,40;UBERON:0003056,3.34e-20,49;UBERON:0002780,1.82e-19,39;UBERON:0001890,1.82e-19,39;UBERON:0006240,1.82e-19,39;UBERON:0002020,2.95e-19,34;UBERON:0003528,3.30e-16,29;UBERON:0002791,3.30e-16,29;UBERON:0001893,3.30e-16,29;UBERON:0010314,3.34e-13,92;UBERON:0000956,4.08e-12,21;UBERON:0001869,4.08e-12,21;UBERON:0000203,4.08e-12,21;UBERON:0002619,9.77e-10,17;UBERON:0002021,1.98e-09,10;UBERON:0000411,1.98e-09,10;UBERON:0001950,1.98e-09,10;UBERON:0003076,3.54e-07,12;UBERON:0003057,3.54e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,0.439372365468944,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.5088736604011,7.40587370980846,6.97214543856797,0,0,0,0,0.7104801149461,13.4820049733282,13.0634223809329,9.64313394468842,8.10035629990144,9.04397333810943,23.4233807211119,29.8172530284678,7.4719387521122,6.70918297127655,6.43453150627015,12.1127469099328,29.6234624357635,27.9563890526363,4.2203612073662,3.01909223887952,2.6045668527838,18.1468949350898,13.5063026407603,19.4053774676549,16.2045722010517,15.5185132071022,3.91438836233131,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0.448026887097336,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.82694207550496,0,2.67195850316685,0.346970653532272,0,0,0.301445281105245,1.29347577849275,0.376999773989026,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,1.86391761218122,45.3810235367898,43.5649150171987,0,1.91704199209472,3.59941638596045,4.70159840170339,38.9455662452539,59.9325789692401,6.78533501409468,89.5195248990224,68.7874580218589,47.1678861150201,45.5897949220399,1.12023300235348,0.870848794270651,4.0435641349388,3.57751155007006,0.390361328888111,0,0.720248519221397,3.76762044589288,4.49040894398764,4.22775276940004,4.49768277886698,9.8307280880826,0.431135985865684,0.189106080167819,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.796137067273973,4.21327912387941,6.94839349209731,6.25159698670304,0.207125772535502,0.234526059981096,0,0.946978942340841,0.787056926989615,0.462801338662135,0.697601834251224,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,49.8387178096982,16.1560241435477,0,0,1.70630600428187,2.78684006232526,2.70621668776396,1.61346819698674,2.44615848229357,1.90225626112559,0.949058123089023,1.81168850196412,1.50801125280162,1.39269530428806,1.16978452271472,0,0.432276099749388,0.796565093017469,0.379335801906163,0.799739588268102,2.25415471346161,0.814605311381257,0.193952487167626,0.420814919341911,0.505892296994058,0.295220295959204,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,1.79261474086228,0.678980343100753,0.938760993154008,1.67506257441816,2.14239276797412,1.36593553500459,0,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,2.45882136509518,5.79467167239938,52.6605935159958,38.3282215156504,0,0.252470927204373,2.83957397474631,5.0757036758563,5.60100834105277,2.86762557543062,8.91194696329577,10.4738316391868,5.26253912177363,9.64444331107329,11.0680577825027,35.6666661228206,2.6968616189571,0,1.14020871547503,8.41347627159931,1.32745138339963,1.21390318077491,0.604647113929502,0.754420319023592,0.295301892880773,1.22974059177571,2.06742634534577,1.09060118843252,1.06949213515416,0.632073515871632,0,0,32.6822021523636,1.44048875225048,1.68166288917581,1.07168517515796,1.06404140185364,5.35106452806212,7.73380396829969,9.74287837166718,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.45740418314925,47.0980267106695,0.170870880797853,0.619160603889667,0.370389054739423,0.188368457004691,0,0,1.35982743995084,1.25956307091292,0.690999869022119,2.86401185404534,1.10717597753397,1.01659733563424,1.83609079397062,2.29997125615916,1.74690050996942,1.88810084938749,0.991841468704031,1.04702376793612,0.777689839750757,10.5627683224777,0,1.19613236835183,0.66183396182839,1.36115831840833,0.645799117388655,1.01373675294467,0.58678619322877,1.69265700297135,0.629156066554265,0,0,0.316011120628178,0.608175645870493,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,1.73870634628971,3.56596703357246,4.02933573387983,0.214368379079066,0.501572104035363,63.2522063731115,61.2232564554545,46.9774321020305,48.8063037856073,57.546931660734,64.9638751755142,64.8021600222534,78.3558893610144,96.0661907046514,76.1107658275175,0.415149390336707,1.19707462020309,1.36586884603307,1.70174701947806,2.09613162627982,1.2869045591501,1.77797382241292,2.47242068686673,1.28367683836726,2.77966932940177,1.52087579934144,1.69763707247469,1.68554713445788,3.00918216302886,2.1825478203133,0,1.73826488917283,2.31491064556446,1.23625770240992,2.20798380201596,1.71434626192708,2.8396128985494,2.14592570952589,1.59881058295561,1.78807822789128,2.36920902096694,1.64635175585495,0.526139422875686,1.62964936615034,0,2.01679530811096,1.47756723563345,2.04615521584845,1.85924209423159,0.771626443924566,4.74640098082097,1.40358965067245,2.36358159453128,0.765153328275374,1.76473135295612,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.75945888556019,0,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5407546914134,0.439372365468944,0.972149495371417,1.1198913730029,2.87505128729943,0,0,0,0,0,0,9.5088736604011,7.40587370980846,6.97214543856797,0,0,0,0,0.7104801149461,13.4820049733282,13.0634223809329,9.64313394468842,8.10035629990144,9.04397333810943,23.4233807211119,29.8172530284678,7.4719387521122,6.70918297127655,6.43453150627015,12.1127469099328,29.6234624357635,27.9563890526363,4.2203612073662,3.01909223887952,2.6045668527838,18.1468949350898,13.5063026407603,19.4053774676549,16.2045722010517,15.5185132071022,3.91438836233131,0.075726193333184,0.302286240427142,0.289864488701678,0,0,0,0,0.448026887097336,2.10666630197628,0,0,0,0.281686839553361,0,0,0,0,0,0,1.82694207550496,0,2.67195850316685,0.346970653532272,0,0,0.301445281105245,1.29347577849275,0.376999773989026,0,0.144599356919912,0,0,0.441683036920787,0.484875253135222,1.86391761218122,45.3810235367898,43.5649150171987,0,1.91704199209472,3.59941638596045,4.70159840170339,38.9455662452539,59.9325789692401,6.78533501409468,89.5195248990224,68.7874580218589,47.1678861150201,45.5897949220399,1.12023300235348,0.870848794270651,4.0435641349388,3.57751155007006,0.390361328888111,0,0.720248519221397,3.76762044589288,4.49040894398764,4.22775276940004,4.49768277886698,9.8307280880826,0.431135985865684,0.189106080167819,0,0.219195732427575,0.556094498451196,0.696504333044333,0,0.796137067273973,4.21327912387941,6.94839349209731,6.25159698670304,0.207125772535502,0.234526059981096,0,0.946978942340841,0.787056926989615,0.462801338662135,0.697601834251224,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.268412837520744,49.8387178096982,16.1560241435477,0,0,1.70630600428187,2.78684006232526,2.70621668776396,1.61346819698674,2.44615848229357,1.90225626112559,0.949058123089023,1.81168850196412,1.50801125280162,1.39269530428806,1.16978452271472,0,0.432276099749388,0.796565093017469,0.379335801906163,0.799739588268102,2.25415471346161,0.814605311381257,0.193952487167626,0.420814919341911,0.505892296994058,0.295220295959204,0,0,0,0.333690211432188,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.369506380333209,0.568474235311454,1.79261474086228,0.678980343100753,0.938760993154008,1.67506257441816,2.14239276797412,1.36593553500459,0,0.44292937929755,0.478364305972461,0.163863314715738,0.345369963731791,0,0,0,2.45882136509518,5.79467167239938,52.6605935159958,38.3282215156504,0,0.252470927204373,2.83957397474631,5.0757036758563,5.60100834105277,2.86762557543062,8.91194696329577,10.4738316391868,5.26253912177363,9.64444331107329,11.0680577825027,35.6666661228206,2.6968616189571,0,1.14020871547503,8.41347627159931,1.32745138339963,1.21390318077491,0.604647113929502,0.754420319023592,0.295301892880773,1.22974059177571,2.06742634534577,1.09060118843252,1.06949213515416,0.632073515871632,0,0,32.6822021523636,1.44048875225048,1.68166288917581,1.07168517515796,1.06404140185364,5.35106452806212,7.73380396829969,9.74287837166718,0.23467170806371,0,0.220528398054962,0.32977250588296,0.161464426695906,0.0603129249281559,0.119372344003136,0,1.45740418314925,47.0980267106695,0.170870880797853,0.619160603889667,0.370389054739423,0.188368457004691,0,0,1.35982743995084,1.25956307091292,0.690999869022119,2.86401185404534,1.10717597753397,1.01659733563424,1.83609079397062,2.29997125615916,1.74690050996942,1.88810084938749,0.991841468704031,1.04702376793612,0.777689839750757,10.5627683224777,0,1.19613236835183,0.66183396182839,1.36115831840833,0.645799117388655,1.01373675294467,0.58678619322877,1.69265700297135,0.629156066554265,0,0,0.316011120628178,0.608175645870493,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.453460767230423,0,0,0,1.73870634628971,3.56596703357246,4.02933573387983,0.214368379079066,0.501572104035363,63.2522063731115,61.2232564554545,46.9774321020305,48.8063037856073,57.546931660734,64.9638751755142,64.8021600222534,78.3558893610144,96.0661907046514,76.1107658275175,0.415149390336707,1.19707462020309,1.36586884603307,1.70174701947806,2.09613162627982,1.2869045591501,1.77797382241292,2.47242068686673,1.28367683836726,2.77966932940177,1.52087579934144,1.69763707247469,1.68554713445788,3.00918216302886,2.1825478203133,0,1.73826488917283,2.31491064556446,1.23625770240992,2.20798380201596,1.71434626192708,2.8396128985494,2.14592570952589,1.59881058295561,1.78807822789128,2.36920902096694,1.64635175585495,0.526139422875686,1.62964936615034,0,2.01679530811096,1.47756723563345,2.04615521584845,1.85924209423159,0.771626443924566,4.74640098082097,1.40358965067245,2.36358159453128,0.765153328275374,1.76473135295612,0.927471342481686 | ||
|short_description=p1@Kcnip3 | |||
}} | }} |
Latest revision as of 16:33, 25 September 2015
Short description: | p1@Kcnip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Kcnip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 12bp_to_ENSMUST00000028850, ENSMUST00000103215, NM_019789, uc008mfm.1, uc008mfn.1_5end |
EntrezGene: | Kcnip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.07e-16 | 33 |
neuronal stem cell | 2.07e-16 | 33 |
neuroblast | 2.07e-16 | 33 |
electrically signaling cell | 2.07e-16 | 33 |
neural cell | 2.85e-14 | 43 |
ectodermal cell | 1.37e-13 | 44 |
neurectodermal cell | 1.37e-13 | 44 |
CNS neuron (sensu Vertebrata) | 3.10e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-13 | 23 |
electrically responsive cell | 1.01e-11 | 39 |
electrically active cell | 1.01e-11 | 39 |