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FFCP PHASE1:Mm9::chr5:143084702..143084734,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr5:143084702..143084734,-
|DHSsupport=NA
|short_description=p1@Mmd2
|DPIdataset=NA
|description=CAGE_peak_1_at_Mmd2_5end
|association_with_transcript=0bp_to_NM_175217,uc009aix.1_5end
|EntrezGene=75104
|EntrezGene=75104
|HGNC=
|HGNC=
|MCL_coexpression_id=612
|TSSclassifier=NA
|UniProt=Q3V1Z9,Q8R189
|UniProt=Q3V1Z9,Q8R189
|association_with_transcript=0bp_to_NM_175217,uc009aix.1_5end
|cluster_id=chr5:143084702..143084734,-
|description=CAGE_peak_1_at_Mmd2_5end
|id=chr5:143084702..143084734,-
|ontology_enrichment_celltype=CL:0000221!1.99e-18!44;CL:0000133!1.99e-18!44;CL:0002319!5.06e-18!43;CL:0000540!3.20e-14!33;CL:0000047!3.20e-14!33;CL:0000031!3.20e-14!33;CL:0000404!3.20e-14!33;CL:0000117!6.01e-13!23;CL:0000337!6.01e-13!23;CL:0000055!1.13e-12!50;CL:0000393!3.30e-09!39;CL:0000211!3.30e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,6.20e-20,44;CL:0000133,6.20e-20,44;CL:0002319,1.73e-19,43;CL:0000540,1.56e-15,33;CL:0000047,1.56e-15,33;CL:0000031,1.56e-15,33;CL:0000404,1.56e-15,33;CL:0000117,3.98e-14,23;CL:0000337,3.98e-14,23;CL:0000393,7.77e-11,39;CL:0000211,7.77e-11,39;CL:0002321,2.14e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.09e-34!73;UBERON:0005743!2.09e-34!73;UBERON:0000073!1.52e-33!75;UBERON:0001016!1.52e-33!75;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!3.58e-25!52;UBERON:0005068!3.58e-25!52;UBERON:0006241!3.58e-25!52;UBERON:0007135!3.58e-25!52;UBERON:0002346!8.84e-25!71;UBERON:0003075!8.84e-25!71;UBERON:0007284!8.84e-25!71;UBERON:0000955!6.36e-24!50;UBERON:0006238!6.36e-24!50;UBERON:0002616!2.70e-23!49;UBERON:0000033!1.47e-21!63;UBERON:0002020!6.13e-20!34;UBERON:0003080!5.88e-18!40;UBERON:0002780!2.20e-17!39;UBERON:0001890!2.20e-17!39;UBERON:0006240!2.20e-17!39;UBERON:0002791!1.33e-16!29;UBERON:0003528!1.33e-16!29;UBERON:0001893!1.33e-16!29;UBERON:0003056!1.46e-16!49;UBERON:0000956!3.02e-12!21;UBERON:0001869!3.02e-12!21;UBERON:0000203!3.02e-12!21;UBERON:0000025!1.71e-10!114;UBERON:0002619!2.37e-10!17;UBERON:0004111!1.25e-09!122;UBERON:0007811!1.25e-08!86;UBERON:0003076!8.07e-08!12;UBERON:0003057!8.07e-08!12;UBERON:0002021!4.54e-07!10;UBERON:0000411!4.54e-07!10;UBERON:0001950!4.54e-07!10;UBERON:0000468!5.30e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.92e-38,73;UBERON:0001016,1.31e-36,75;UBERON:0000073,1.81e-29,54;UBERON:0004121,8.84e-28,95;UBERON:0000924,8.84e-28,95;UBERON:0006601,8.84e-28,95;UBERON:0001049,1.26e-27,52;UBERON:0005068,1.26e-27,52;UBERON:0006241,1.26e-27,52;UBERON:0007135,1.26e-27,52;UBERON:0002346,4.33e-25,64;UBERON:0003075,4.33e-25,64;UBERON:0007284,4.33e-25,64;UBERON:0000955,9.15e-24,47;UBERON:0006238,9.15e-24,47;UBERON:0002616,4.36e-23,46;UBERON:0002020,7.60e-22,34;UBERON:0010371,3.83e-21,73;UBERON:0003080,1.17e-19,40;UBERON:0002780,5.05e-19,39;UBERON:0001890,5.05e-19,39;UBERON:0006240,5.05e-19,39;UBERON:0003528,3.68e-18,29;UBERON:0002791,3.68e-18,29;UBERON:0001893,3.68e-18,29;UBERON:0003056,4.45e-17,49;UBERON:0010314,5.77e-15,92;UBERON:0000956,2.36e-13,21;UBERON:0001869,2.36e-13,21;UBERON:0000203,2.36e-13,21;UBERON:0002619,2.91e-11,17;UBERON:0000025,2.92e-10,114;UBERON:0004111,3.32e-09,122;UBERON:0003076,1.81e-08,12;UBERON:0003057,1.81e-08,12;UBERON:0002021,1.21e-07,10;UBERON:0000411,1.21e-07,10;UBERON:0001950,1.21e-07,10
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,51.0178865930245,80.4051428808167,66.3005955843306,41.4359808011073,34.5006154475932,0,0,0,0,0,0,19.624696703381,23.2756030879694,20.2826049121977,0.677689064138264,1.77858959222228,0,0.988866362566974,0,107.256839565589,227.073018445039,28.9294018340653,34.5615202129128,33.4416688548697,185.673139862472,156.154058452791,14.8213867050094,12.3640657613525,20.2228133054205,94.6996576594743,92.1902580975055,98.3081812839958,22.8163277773235,26.2569537138916,28.129322010065,85.7091806934239,111.989759396304,103.4444137449,88.0939470566266,92.1144774770196,22.927131836512,0.075726193333184,2.04043212288321,1.15945795480671,1.72084775396277,2.03991400112325,5.39703191637817,5.19821133958135,0.448026887097336,3.7919993435573,0,0,0,20.5631392873954,0,0,0,0,0,0,3.31133251185274,0,21.5241101643996,4.51061849591953,3.04465478312141,3.22861696158482,3.16517545160507,3.64524992120685,37.3229776249136,0,2.16899035379867,0,0.161766849947409,0,0,0,23.1296829639122,35.6059401582874,0,0,0,0,53.3254676281169,56.2725741466911,34.0523294225863,58.4049715846049,58.3031242713154,59.0118046549151,62.94961007029,0.509196819251581,0.746441823660558,1.51633655060205,6.52369753248069,0.130120442962704,0.229902104433473,0.540186389416048,1.20563854268572,1.76894897793452,2.8185018462667,5.15359485078509,13.7112786491678,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,3.98068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,78.2278608658553,63.6979550627771,0,0.793351699990633,0.639864751605702,0.464473343720877,0.644337306610467,0,0,0.570676878337677,0,0.494096864172033,1.50801125280162,0.596869416123452,0.779856348476481,0,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0.616985819609003,1.77871576252289,6.67380422864376,8.84515478009414,8.31989815823959,7.91154473415161,13.2647437863829,6.11102044275408,5.17853047411459,2.10775794807546,15.9245619649087,11.5014565221884,17.1184835927512,33.388031023258,6.31447194867779,10.9432422248366,27.0168371963486,0,0.757965647081939,0.162964976442026,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0,0.345369963731791,0,0,0,0,3.86311444826625,56.6743582656906,58.6058432961016,0,0,4.41711507182759,2.73307121007647,13.1408272617007,10.7535959078648,17.1554979043443,25.4768877709949,4.04810701674894,6.42962887404886,11.0680577825027,57.5165156395035,6.38730383437209,0.534196811001766,0.162886959353576,1.15479086080775,1.32745138339963,4.12727081463468,4.83717691143602,2.07465587731488,5.61073596473468,2.15204603560749,2.58428293168221,6.18007340111759,6.06045543254026,2.21225730555071,0,1.03135543248187,5.7874732978144,2.34079422240703,2.06973894052407,3.00071849044229,3.72414490648775,4.8159580752559,6.74650984468696,7.00269382963578,0,0,1.10264199027481,0.16488625294148,0.161464426695906,0,0,0,1.45740418314925,57.852694227279,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,1.21991680276109,1.29606408986162,0.627264888043406,0.655087691238533,2.02296519577231,3.38879168473877,0,0.259229946583586,0,18.0381740378941,13.1574560518701,13.8985131983962,19.6395700227488,26.2194441659794,34.9739179765911,35.6766005483092,59.7638126433731,52.4296722128554,32.6138563115108,25.0586105444343,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0,0,79.0652579663893,84.6998435173205,76.7679988008791,87.8169761776244,51.3811889827982,46.8344216381614,63.4521150217897,43.6811567127494,46.2205257163889,44.5273868106565,0.518936737920883,3.19219898720825,5.80494259564056,6.07766792670735,2.51535795153579,4.96377472815038,6.44515510624684,8.03536723231687,5.13470735346904,4.29585259998456,5.83002389747551,7.54505365544305,6.08669798554236,4.92993673517493,6.31790158511746,6.19181798667996,8.45955579397445,6.55891349576597,7.82963211526283,6.91834924631667,7.88599280486455,6.21165321557681,4.5302876089991,5.95920308192547,5.92889096616583,6.43071019976741,5.48783918618318,5.78753365163254,6.51859746460137,2.80571135828869,5.57584585183618,5.81176446015824,4.50154147486658,6.35241048862461,7.52335782826451,11.9909077410214,3.97683734357194,5.80151845930405,3.25190164517034,4.19123696327079,4.63735671240843
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,51.0178865930245,80.4051428808167,66.3005955843306,41.4359808011073,34.5006154475932,0,0,0,0,0,0,19.624696703381,23.2756030879694,20.2826049121977,0.677689064138264,1.77858959222228,0,0.988866362566974,0,107.256839565589,227.073018445039,28.9294018340653,34.5615202129128,33.4416688548697,185.673139862472,156.154058452791,14.8213867050094,12.3640657613525,20.2228133054205,94.6996576594743,92.1902580975055,98.3081812839958,22.8163277773235,26.2569537138916,28.129322010065,85.7091806934239,111.989759396304,103.4444137449,88.0939470566266,92.1144774770196,22.927131836512,0.075726193333184,2.04043212288321,1.15945795480671,1.72084775396277,2.03991400112325,5.39703191637817,5.19821133958135,0.448026887097336,3.7919993435573,0,0,0,20.5631392873954,0,0,0,0,0,0,3.31133251185274,0,21.5241101643996,4.51061849591953,3.04465478312141,3.22861696158482,3.16517545160507,3.64524992120685,37.3229776249136,0,2.16899035379867,0,0.161766849947409,0,0,0,23.1296829639122,35.6059401582874,0,0,0,0,53.3254676281169,56.2725741466911,34.0523294225863,58.4049715846049,58.3031242713154,59.0118046549151,62.94961007029,0.509196819251581,0.746441823660558,1.51633655060205,6.52369753248069,0.130120442962704,0.229902104433473,0.540186389416048,1.20563854268572,1.76894897793452,2.8185018462667,5.15359485078509,13.7112786491678,0.215567992932842,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,3.98068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0,78.2278608658553,63.6979550627771,0,0.793351699990633,0.639864751605702,0.464473343720877,0.644337306610467,0,0,0.570676878337677,0,0.494096864172033,1.50801125280162,0.596869416123452,0.779856348476481,0,0,0,0,0.456994050438915,0,0,0,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0.616985819609003,1.77871576252289,6.67380422864376,8.84515478009414,8.31989815823959,7.91154473415161,13.2647437863829,6.11102044275408,5.17853047411459,2.10775794807546,15.9245619649087,11.5014565221884,17.1184835927512,33.388031023258,6.31447194867779,10.9432422248366,27.0168371963486,0,0.757965647081939,0.162964976442026,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0,0.345369963731791,0,0,0,0,3.86311444826625,56.6743582656906,58.6058432961016,0,0,4.41711507182759,2.73307121007647,13.1408272617007,10.7535959078648,17.1554979043443,25.4768877709949,4.04810701674894,6.42962887404886,11.0680577825027,57.5165156395035,6.38730383437209,0.534196811001766,0.162886959353576,1.15479086080775,1.32745138339963,4.12727081463468,4.83717691143602,2.07465587731488,5.61073596473468,2.15204603560749,2.58428293168221,6.18007340111759,6.06045543254026,2.21225730555071,0,1.03135543248187,5.7874732978144,2.34079422240703,2.06973894052407,3.00071849044229,3.72414490648775,4.8159580752559,6.74650984468696,7.00269382963578,0,0,1.10264199027481,0.16488625294148,0.161464426695906,0,0,0,1.45740418314925,57.852694227279,0,0.412773735926445,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.316335993581135,1.21991680276109,1.29606408986162,0.627264888043406,0.655087691238533,2.02296519577231,3.38879168473877,0,0.259229946583586,0,18.0381740378941,13.1574560518701,13.8985131983962,19.6395700227488,26.2194441659794,34.9739179765911,35.6766005483092,59.7638126433731,52.4296722128554,32.6138563115108,25.0586105444343,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0,0,79.0652579663893,84.6998435173205,76.7679988008791,87.8169761776244,51.3811889827982,46.8344216381614,63.4521150217897,43.6811567127494,46.2205257163889,44.5273868106565,0.518936737920883,3.19219898720825,5.80494259564056,6.07766792670735,2.51535795153579,4.96377472815038,6.44515510624684,8.03536723231687,5.13470735346904,4.29585259998456,5.83002389747551,7.54505365544305,6.08669798554236,4.92993673517493,6.31790158511746,6.19181798667996,8.45955579397445,6.55891349576597,7.82963211526283,6.91834924631667,7.88599280486455,6.21165321557681,4.5302876089991,5.95920308192547,5.92889096616583,6.43071019976741,5.48783918618318,5.78753365163254,6.51859746460137,2.80571135828869,5.57584585183618,5.81176446015824,4.50154147486658,6.35241048862461,7.52335782826451,11.9909077410214,3.97683734357194,5.80151845930405,3.25190164517034,4.19123696327079,4.63735671240843
|short_description=p1@Mmd2
}}
}}

Latest revision as of 16:31, 25 September 2015

Short description:p1@Mmd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mmd2_5end
Coexpression cluster:MCL_coexpression_mm9:612
Association with transcript: 0bp_to_NM_175217, uc009aix.1_5end
EntrezGene:Mmd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mmd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C251.02
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B880.41
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C366.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C441.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C434.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C319.62
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8107.26
Mouse Microglia, donor2.CNhs12634.11736-123E8227.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D528.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.56
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D933.44
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1185.67
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5156.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D214.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D394.70
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F392.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D798.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F426.26
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E485.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5111.99
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6103.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D688.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F692.11
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F92.04
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D721.52
adrenal gland, embryo E14.CNhs11038.406-44C54.51
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I337.32
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B223.13
cerebellum, neonate N30.CNhs11135.1395-42I235.61
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A453.33
corpus striatum, adult.CNhs10487.19-21D856.27
corpus striatum, neonate N00.CNhs11226.630-43F134.05
cortex, adult.CNhs10473.12-14D558.40
cortex, neonate N30.CNhs11107.1392-42F258.30
diencephalon, adult.CNhs10482.20-12F259.01
diencephalon, neonate N30.CNhs11201.1388-42B262.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A213.71
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E878.23
hippocampus, neonate N00.CNhs11228.627-43G163.70
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F86.67
liver, embryo E13.CNhs10524.378-3H68.85
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G45.18
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G215.92
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H217.12
liver, neonate N10.CNhs11115.751-24B933.39
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H110.94
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C256.67
medulla oblongata, neonate N30.CNhs11200.1396-42A358.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I957.52
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E62.34
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B93.72
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F56.75
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C957.85
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A93.39
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G518.04
testis, embryo E13.CNhs11031.389-23F513.16
testis, embryo E15.CNhs11034.443-27C513.90
testis, embryo E16.CNhs11033.470-26G519.64
testis, embryo E17.CNhs11029.486-18I526.22
testis, embryo E18.CNhs11027.503-18G534.97
testis, neonate N00.CNhs11189.1300-22B735.68
testis, neonate N07.CNhs11222.726-26I459.76
testis, neonate N10.CNhs11204.763-44D952.43
testis, neonate N20.CNhs11110.839-18H332.61
testis, neonate N30.CNhs11130.1391-42E225.06
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A179.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A284.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A376.77
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D787.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A451.38
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A663.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A743.68
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A846.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A944.53
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H25.80
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F24.96
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.35
whole body, embryo E17.5.CNhs10513.490-9F97.52
whole body, embryo E17.CNhs10517.475-3I511.99
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell6.20e-2044
neurectodermal cell6.20e-2044
neural cell1.73e-1943
neuron1.56e-1533
neuronal stem cell1.56e-1533
neuroblast1.56e-1533
electrically signaling cell1.56e-1533
CNS neuron (sensu Vertebrata)3.98e-1423
neuroblast (sensu Vertebrata)3.98e-1423
electrically responsive cell7.77e-1139
electrically active cell7.77e-1139
embryonic cell2.14e-0770

Uber anatomy
Ontology termp-valuen
central nervous system7.92e-3873
nervous system1.31e-3675
regional part of nervous system1.81e-2954
ectoderm-derived structure8.84e-2895
ectoderm8.84e-2895
presumptive ectoderm8.84e-2895
neural tube1.26e-2752
neural rod1.26e-2752
future spinal cord1.26e-2752
neural keel1.26e-2752
neurectoderm4.33e-2564
neural plate4.33e-2564
presumptive neural plate4.33e-2564
brain9.15e-2447
future brain9.15e-2447
regional part of brain4.36e-2346
gray matter7.60e-2234
ecto-epithelium3.83e-2173
anterior neural tube1.17e-1940
regional part of forebrain5.05e-1939
forebrain5.05e-1939
future forebrain5.05e-1939
brain grey matter3.68e-1829
regional part of telencephalon3.68e-1829
telencephalon3.68e-1829
pre-chordal neural plate4.45e-1749
structure with developmental contribution from neural crest5.77e-1592
cerebral cortex2.36e-1321
cerebral hemisphere2.36e-1321
pallium2.36e-1321
regional part of cerebral cortex2.91e-1117
tube2.92e-10114
anatomical conduit3.32e-09122
posterior neural tube1.81e-0812
chordal neural plate1.81e-0812
occipital lobe1.21e-0710
visual cortex1.21e-0710
neocortex1.21e-0710
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