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FFCP PHASE1:Mm9::chr7:112729786..112729797,-: Difference between revisions

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(Created page with "{{FFCP |id=chr7:112729786..112729797,- |short_description=p5@Apbb1 |description=CAGE_peak_5_at_Apbb1_5end |association_with_transcript=-51bp_to_uc009iyi.1_5end |EntrezGen...")
 
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{{FFCP
{{FFCP
|id=chr7:112729786..112729797,-
|DHSsupport=NA
|short_description=p5@Apbb1
|DPIdataset=NA
|description=CAGE_peak_5_at_Apbb1_5end
|association_with_transcript=-51bp_to_uc009iyi.1_5end
|EntrezGene=11785
|EntrezGene=11785
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9QXJ1
|UniProt=Q9QXJ1
|association_with_transcript=-51bp_to_uc009iyi.1_5end
|cluster_id=chr7:112729786..112729797,-
|description=CAGE_peak_5_at_Apbb1_5end
|id=chr7:112729786..112729797,-
|ontology_enrichment_celltype=CL:0000117!2.94e-14!23;CL:0000337!2.94e-14!23;CL:0000540!1.37e-10!33;CL:0000047!1.37e-10!33;CL:0000031!1.37e-10!33;CL:0000404!1.37e-10!33;CL:0002319!1.41e-10!43;CL:0000221!1.47e-10!44;CL:0000133!1.47e-10!44;CL:0000393!5.48e-08!39;CL:0000211!5.48e-08!39;CL:0000055!6.12e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.47e-15,23;CL:0000337,2.47e-15,23;CL:0000540,7.37e-10,33;CL:0000047,7.37e-10,33;CL:0000031,7.37e-10,33;CL:0000404,7.37e-10,33;CL:0002610,6.14e-09,3;CL:0002319,3.74e-08,43;CL:0002614,4.47e-08,3;CL:0000393,6.20e-08,39;CL:0000211,6.20e-08,39;CL:0000221,6.65e-08,44;CL:0000133,6.65e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.42e-27!73;UBERON:0005743!2.42e-27!73;UBERON:0000073!1.96e-26!75;UBERON:0001016!1.96e-26!75;UBERON:0001049!2.69e-25!52;UBERON:0005068!2.69e-25!52;UBERON:0006241!2.69e-25!52;UBERON:0007135!2.69e-25!52;UBERON:0002346!4.71e-25!71;UBERON:0003075!4.71e-25!71;UBERON:0007284!4.71e-25!71;UBERON:0000033!1.26e-24!63;UBERON:0000955!3.21e-24!50;UBERON:0006238!3.21e-24!50;UBERON:0002616!1.53e-23!49;UBERON:0004121!7.00e-23!102;UBERON:0000924!7.00e-23!102;UBERON:0006601!7.00e-23!102;UBERON:0002020!6.92e-22!34;UBERON:0003056!6.09e-21!49;UBERON:0003080!7.53e-19!40;UBERON:0002791!1.16e-18!29;UBERON:0003528!1.16e-18!29;UBERON:0001893!1.16e-18!29;UBERON:0002780!3.95e-18!39;UBERON:0001890!3.95e-18!39;UBERON:0006240!3.95e-18!39;UBERON:0000956!1.96e-13!21;UBERON:0001869!1.96e-13!21;UBERON:0000203!1.96e-13!21;UBERON:0007811!1.69e-11!86;UBERON:0002619!2.23e-11!17;UBERON:0000025!8.03e-11!114;UBERON:0004111!1.05e-10!122;UBERON:0000153!8.32e-10!94;UBERON:0002021!8.84e-09!10;UBERON:0000411!8.84e-09!10;UBERON:0001950!8.84e-09!10;UBERON:0003076!5.25e-07!12;UBERON:0003057!5.25e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.92e-40,54;UBERON:0001017,1.26e-36,73;UBERON:0001049,1.59e-35,52;UBERON:0005068,1.59e-35,52;UBERON:0006241,1.59e-35,52;UBERON:0007135,1.59e-35,52;UBERON:0001016,1.79e-35,75;UBERON:0002020,3.78e-34,34;UBERON:0000955,2.46e-31,47;UBERON:0006238,2.46e-31,47;UBERON:0003528,1.02e-30,29;UBERON:0002791,1.02e-30,29;UBERON:0001893,1.02e-30,29;UBERON:0002616,1.29e-29,46;UBERON:0003080,1.18e-28,40;UBERON:0002346,1.06e-27,64;UBERON:0003075,1.06e-27,64;UBERON:0007284,1.06e-27,64;UBERON:0002780,9.17e-27,39;UBERON:0001890,9.17e-27,39;UBERON:0006240,9.17e-27,39;UBERON:0004121,1.32e-26,95;UBERON:0000924,1.32e-26,95;UBERON:0006601,1.32e-26,95;UBERON:0002021,6.27e-25,10;UBERON:0000411,6.27e-25,10;UBERON:0001950,6.27e-25,10;UBERON:0010371,1.61e-23,73;UBERON:0002619,3.81e-23,17;UBERON:0003056,2.00e-22,49;UBERON:0000956,2.00e-21,21;UBERON:0001869,2.00e-21,21;UBERON:0000203,2.00e-21,21;UBERON:0010314,2.27e-17,92;UBERON:0000025,8.34e-13,114;UBERON:0004111,1.49e-11,122;UBERON:0002950,2.96e-10,4;UBERON:0001891,2.96e-10,4;UBERON:0009616,2.96e-10,4;UBERON:0010286,2.96e-10,4;UBERON:0002420,3.00e-10,8;UBERON:0007245,3.00e-10,8;UBERON:0010009,3.00e-10,8;UBERON:0010011,3.00e-10,8;UBERON:0000454,3.00e-10,8;UBERON:0011216,1.60e-09,194;UBERON:0004684,6.14e-09,3;UBERON:0002275,6.14e-09,3;UBERON:0002038,4.47e-08,3;UBERON:0009663,4.47e-08,3;UBERON:0009661,4.47e-08,3;UBERON:0000125,4.47e-08,3;UBERON:0002308,4.47e-08,3;UBERON:0003076,3.31e-07,12;UBERON:0003057,3.31e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,1.99955689082663,1.10434270475807,0.244981598429908,0.383381884072945,1.83843757322004,3.30347642998166,3.19218345212969,4.45458946443106,1.05509030184155,0.914876436024097,1.56274011167028,1.67509799400829,2.8138130501584,2.13917546887534,1.47314292736834,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,1.63350657746724,4.34560800480691,5.11430914660661,2.90903262383384,1.94689515681309,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0.146199987425332,0,0.134206418760372,2.73376933133365,1.02904612379284,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.655453258862952,0,0.578596234326046,0,0,0,0,5.45872005958493,4.21962071731931,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,4.63563255026274,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,2.76195141904306,1.14579102687879,5.499301834998,6.16574267793578,3.0215755895588,2.70009000092722,4.05289082901798,2.26571204492102,2.5888015587591,0.31136204275253,0,0.170733605754134,0,0.838452650511929,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0.768436610643109,0.414758449233911,0.540023753326763,0.841299845405528,1.99955689082663,1.10434270475807,0.244981598429908,0.383381884072945,1.83843757322004,3.30347642998166,3.19218345212969,4.45458946443106,1.05509030184155,0.914876436024097,1.56274011167028,1.67509799400829,2.8138130501584,2.13917546887534,1.47314292736834,0.854230084794618,0.931997229126503,0,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.11418387971906,0,0,0.173485326766136,0,0.461230994512117,0,0.117588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0.484875253135222,0,0.878342391034642,0.628340120440365,0,0,0,0,2.54644086988199,0.915001205637253,1.63350657746724,4.34560800480691,5.11430914660661,2.90903262383384,1.94689515681309,0.101839363850316,0.124406970610093,0,0.210441855886474,0.390361328888111,0.229902104433473,0.180062129805349,0.753524089178575,0.476255494059295,0.12811372028485,0.562210347358373,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393528463494808,0.617068451549513,0.232533944750408,0,0.233530684734339,0.16455984991348,0.492502392237286,0.243206428637567,0.146199987425332,0,0.134206418760372,2.73376933133365,1.02904612379284,0,0,0.639864751605702,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.569003702859245,0,0,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0.189491411770485,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.195133647857799,0.315270288212382,0,0.318909537314974,0.655453258862952,0,0.578596234326046,0,0,0,0,5.45872005958493,4.21962071731931,0.163934945376675,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,0,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,4.63563255026274,0,0.412773735926445,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.785267825952089,0.129614973291793,0,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,2.76195141904306,1.14579102687879,5.499301834998,6.16574267793578,3.0215755895588,2.70009000092722,4.05289082901798,2.26571204492102,2.5888015587591,0.31136204275253,0,0.170733605754134,0,0.838452650511929,0,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0,0,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0,0.177475806159338,0.476872379894642,0.145346416632329,0.376437521661322,0.169229215783353,0.182927972872773,0.526139422875686,0.543216455383447,0,0.355905054372522,0.591026894253381,0,0,0.385813221962283,0.499621155875892,0.233931608445408,0,0,0.220591419119515,0.231867835620421
|short_description=p5@Apbb1
}}
}}

Latest revision as of 16:30, 25 September 2015

Short description:p5@Apbb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Apbb1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -51bp_to_uc009iyi.1_5end
EntrezGene:Apbb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Apbb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.38
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F25.11
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.50
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system9.92e-4054
central nervous system1.26e-3673
neural tube1.59e-3552
neural rod1.59e-3552
future spinal cord1.59e-3552
neural keel1.59e-3552
nervous system1.79e-3575
gray matter3.78e-3434
brain2.46e-3147
future brain2.46e-3147
brain grey matter1.02e-3029
regional part of telencephalon1.02e-3029
telencephalon1.02e-3029
regional part of brain1.29e-2946
anterior neural tube1.18e-2840
neurectoderm1.06e-2764
neural plate1.06e-2764
presumptive neural plate1.06e-2764
regional part of forebrain9.17e-2739
forebrain9.17e-2739
future forebrain9.17e-2739
ectoderm-derived structure1.32e-2695
ectoderm1.32e-2695
presumptive ectoderm1.32e-2695
occipital lobe6.27e-2510
visual cortex6.27e-2510
neocortex6.27e-2510
ecto-epithelium1.61e-2373
regional part of cerebral cortex3.81e-2317
pre-chordal neural plate2.00e-2249
cerebral cortex2.00e-2121
cerebral hemisphere2.00e-2121
pallium2.00e-2121
structure with developmental contribution from neural crest2.27e-1792
tube8.34e-13114
anatomical conduit1.49e-11122
regional part of midbrain2.96e-104
midbrain2.96e-104
presumptive midbrain2.96e-104
midbrain neural tube2.96e-104
basal ganglion3.00e-108
nuclear complex of neuraxis3.00e-108
aggregate regional part of brain3.00e-108
collection of basal ganglia3.00e-108
cerebral subcortex3.00e-108
organ system subdivision1.60e-09194
raphe nuclei6.14e-093
reticular formation6.14e-093
substantia nigra4.47e-083
telencephalic nucleus4.47e-083
midbrain nucleus4.47e-083
neural nucleus4.47e-083
nucleus of brain4.47e-083
posterior neural tube3.31e-0712
chordal neural plate3.31e-0712
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