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FFCP PHASE1:Mm9::chr8:69221365..69221382,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr8:69221365..69221382,+
|DHSsupport=NA
|short_description=p3@Npy1r
|DPIdataset=NA
|description=CAGE_peak_3_at_Npy1r_5end
|association_with_transcript=44bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end
|EntrezGene=18166
|EntrezGene=18166
|HGNC=
|HGNC=
|MCL_coexpression_id=98
|TSSclassifier=NA
|UniProt=Q04573,Q3V1K5
|UniProt=Q04573,Q3V1K5
|association_with_transcript=44bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end
|cluster_id=chr8:69221365..69221382,+
|description=CAGE_peak_3_at_Npy1r_5end
|id=chr8:69221365..69221382,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!3.01e-09!122;UBERON:0002346!4.65e-09!71;UBERON:0003075!4.65e-09!71;UBERON:0007284!4.65e-09!71;UBERON:0001049!7.50e-09!52;UBERON:0005068!7.50e-09!52;UBERON:0006241!7.50e-09!52;UBERON:0007135!7.50e-09!52;UBERON:0000033!8.86e-09!63;UBERON:0000955!2.21e-08!50;UBERON:0006238!2.21e-08!50;UBERON:0000025!2.50e-08!114;UBERON:0002616!5.97e-08!49;UBERON:0004121!8.43e-08!102;UBERON:0000924!8.43e-08!102;UBERON:0006601!8.43e-08!102;UBERON:0003056!8.81e-08!49;UBERON:0002021!9.50e-08!10;UBERON:0000411!9.50e-08!10;UBERON:0001950!9.50e-08!10;UBERON:0003080!7.17e-07!40;UBERON:0000468!7.71e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.25e-14,10;UBERON:0000411,1.25e-14,10;UBERON:0001950,1.25e-14,10;UBERON:0004111,1.78e-14,122;UBERON:0000025,3.97e-14,114;UBERON:0002020,4.15e-11,34;UBERON:0002619,4.38e-11,17;UBERON:0003528,5.52e-11,29;UBERON:0002791,5.52e-11,29;UBERON:0001893,5.52e-11,29;UBERON:0000073,6.36e-11,54;UBERON:0001049,1.07e-10,52;UBERON:0005068,1.07e-10,52;UBERON:0006241,1.07e-10,52;UBERON:0007135,1.07e-10,52;UBERON:0000955,2.18e-10,47;UBERON:0006238,2.18e-10,47;UBERON:0000956,5.50e-10,21;UBERON:0001869,5.50e-10,21;UBERON:0000203,5.50e-10,21;UBERON:0003080,7.12e-10,40;UBERON:0002616,1.27e-09,46;UBERON:0000055,4.83e-09,5;UBERON:0007500,4.83e-09,5;UBERON:0001981,4.83e-09,5;UBERON:0002049,4.83e-09,5;UBERON:0007798,4.83e-09,5;UBERON:0004537,4.83e-09,5;UBERON:0006965,4.83e-09,5;UBERON:0002780,5.13e-09,39;UBERON:0001890,5.13e-09,39;UBERON:0006240,5.13e-09,39;UBERON:0007023,6.23e-09,51;UBERON:0010371,1.52e-08,73;UBERON:0002346,3.27e-08,64;UBERON:0003075,3.27e-08,64;UBERON:0007284,3.27e-08,64;UBERON:0003056,6.68e-08,49;UBERON:0010314,6.91e-08,92;UBERON:0001017,9.12e-08,73;UBERON:0000947,1.05e-07,4;UBERON:0001637,1.05e-07,4;UBERON:0004573,1.05e-07,4;UBERON:0003509,1.05e-07,4;UBERON:0004571,1.05e-07,4;UBERON:0010191,1.05e-07,4;UBERON:0004572,1.05e-07,4;UBERON:0001016,2.26e-07,75
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.414754335089,102.998962119027,31.9371348761326,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0.210324961351382,0.571301968807607,1.54607978666129,0.857435594504678,0.287536413054709,0,1.10115880999389,1.14918604276669,0.614426133024974,0,0,0,0,1.12552522006336,1.83357897332172,0.589257170947335,1.85083185038834,0.745597783301202,0,0.0755715601067855,3.47837386442013,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,3.36619248741323,0.890652834388949,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,8.24216334443496,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,2.84602214869163,2.28750301409313,1.25654352112864,3.30266208365325,3.06858548796397,1.45451631191692,1.94689515681309,0.509196819251581,0.746441823660558,0.505445516867349,1.26265113531884,0,0.689706313300419,0.540186389416048,0.90422890701429,0.816437989815934,0.512454881139399,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.787056926989615,1.54267112887378,0.930135779001631,1.07309360559848,0.350296027101508,0.987359099480883,0.492502392237286,2.02672023864639,1.75439984910399,1.97595103761946,2.68412837520744,5.67782861123144,1.85228302282712,0,0.528901133327089,0.639864751605702,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0.350679099451593,0.442655759869801,2.65698266363284,1.8839847340965,4.68909222902842,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,1.10344600874334,1.32878813789265,2.23236676120482,2.78567635016755,1.20879487306127,1.59113964439663,0,0,0.491764273019036,1.10374698521893,1.12385412991454,1.05490517932983,0,2.27223834483936,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,1.92792789853084,2.12910127812403,0.178065603667255,0.977321756121456,2.14461159864296,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.857348140126369,0.886701168211368,0.713475270408282,0.658196082408484,0.304464949114599,0.23467170806371,0,0.441056796109924,1.6488625294148,1.61464426695906,0.361877549568935,0.954978752025092,0.492422699235184,0.291480836629851,1.29797711407357,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.578574190077352,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0,0,0,9.46629010757733,1.12609485270709,1.09890974560359,0.643105137237198,3.51100472824754,3.95326289831947,6.44455331110048,4.58316410751517,1.89038500578056,1.37016503954128,3.7769694869485,3.37511250115903,5.40385443869065,4.53142408984205,3.10656187051092,0,0.798049746802062,0.341467211508268,0.243106717068294,0.419226325255965,0,0.44449345560323,1.23621034343337,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.459483751644906,0.952587382566147,0.347652977834566,0,0.412085900803307,0.735994600671987,0,0.70990322463735,0.476872379894642,0.581385666529314,0.282328141245992,0.169229215783353,0.182927972872773,0,0.543216455383447,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.385813221962283,0.749431733813838,0.233931608445408,1.50409737833809,1.72159498861959,0.441182838239031,1.15933917810211
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,128.414754335089,102.998962119027,31.9371348761326,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0.299600110518405,0,0.414758449233911,0.135005938331691,0.210324961351382,0.571301968807607,1.54607978666129,0.857435594504678,0.287536413054709,0,1.10115880999389,1.14918604276669,0.614426133024974,0,0,0,0,1.12552522006336,1.83357897332172,0.589257170947335,1.85083185038834,0.745597783301202,0,0.0755715601067855,3.47837386442013,0,0,0,0,0,0.702222100658759,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,3.36619248741323,0.890652834388949,0,0.304465478312141,0,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,8.24216334443496,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,2.84602214869163,2.28750301409313,1.25654352112864,3.30266208365325,3.06858548796397,1.45451631191692,1.94689515681309,0.509196819251581,0.746441823660558,0.505445516867349,1.26265113531884,0,0.689706313300419,0.540186389416048,0.90422890701429,0.816437989815934,0.512454881139399,0.0937017245597288,0.776110112217047,0,0.189106080167819,0,0.43839146485515,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0.710234206755631,0.787056926989615,1.54267112887378,0.930135779001631,1.07309360559848,0.350296027101508,0.987359099480883,0.492502392237286,2.02672023864639,1.75439984910399,1.97595103761946,2.68412837520744,5.67782861123144,1.85228302282712,0,0.528901133327089,0.639864751605702,0.232236671860439,0.77320476793256,0.403367049246685,0.22237804384487,0.380451252225118,0.474529061544512,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0.597423819763102,0.189667900953082,0.114248512609729,0,0,0,0.350679099451593,0.442655759869801,2.65698266363284,1.8839847340965,4.68909222902842,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0.252578877947112,0,0,2.03228509183265,0,0.162964976442026,0.169745085775188,0,0,0.238043640886014,0.195133647857799,1.10344600874334,1.32878813789265,2.23236676120482,2.78567635016755,1.20879487306127,1.59113964439663,0,0,0.491764273019036,1.10374698521893,1.12385412991454,1.05490517932983,0,2.27223834483936,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,1.92792789853084,2.12910127812403,0.178065603667255,0.977321756121456,2.14461159864296,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.516856586336442,0,0.356497378384721,0.632073515871632,0,0,0,0.540183282093931,0.258717367565509,0.857348140126369,0.886701168211368,0.713475270408282,0.658196082408484,0.304464949114599,0.23467170806371,0,0.441056796109924,1.6488625294148,1.61464426695906,0.361877549568935,0.954978752025092,0.492422699235184,0.291480836629851,1.29797711407357,0.854354403989263,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0.316335993581135,0,0.216010681643603,0.209088296014469,0.436725127492355,0.809186078308924,0.578574190077352,0.785267825952089,0.518459893167171,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.516639293910924,0,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0.179026695667481,0.39736270956253,0.120195449519969,0,0.100966449948148,0.304827226619999,0,0.0974578807397524,0,0.350630706544707,0.226730383615211,0,0,0,9.46629010757733,1.12609485270709,1.09890974560359,0.643105137237198,3.51100472824754,3.95326289831947,6.44455331110048,4.58316410751517,1.89038500578056,1.37016503954128,3.7769694869485,3.37511250115903,5.40385443869065,4.53142408984205,3.10656187051092,0,0.798049746802062,0.341467211508268,0.243106717068294,0.419226325255965,0,0.44449345560323,1.23621034343337,0.962757628775446,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.320125762024346,0.459483751644906,0.952587382566147,0.347652977834566,0,0.412085900803307,0.735994600671987,0,0.70990322463735,0.476872379894642,0.581385666529314,0.282328141245992,0.169229215783353,0.182927972872773,0,0.543216455383447,0.561142271657738,0.118635018124174,0.492522411877817,0,0.309873682371932,0.385813221962283,0.749431733813838,0.233931608445408,1.50409737833809,1.72159498861959,0.441182838239031,1.15933917810211
|short_description=p3@Npy1r
}}
}}

Latest revision as of 16:27, 25 September 2015

Short description:p3@Npy1r
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Npy1r_5end
Coexpression cluster:MCL_coexpression_mm9:98
Association with transcript: 44bp_to_ENSMUST00000039303, NM_010934, uc009lvt.2, uc012gej.1_5end
EntrezGene:Npy1r
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Npy1r

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8128.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9103.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B331.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H18.24
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F11.26
cortex, adult.CNhs10473.12-14D53.30
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I61.75
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D22.68
hippocampus, adult.CNhs10478.13-16E85.68
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I12.66
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.59
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.47
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
occipital lobe1.25e-1410
visual cortex1.25e-1410
neocortex1.25e-1410
anatomical conduit1.78e-14122
tube3.97e-14114
gray matter4.15e-1134
regional part of cerebral cortex4.38e-1117
brain grey matter5.52e-1129
regional part of telencephalon5.52e-1129
telencephalon5.52e-1129
regional part of nervous system6.36e-1154
neural tube1.07e-1052
neural rod1.07e-1052
future spinal cord1.07e-1052
neural keel1.07e-1052
brain2.18e-1047
future brain2.18e-1047
cerebral cortex5.50e-1021
cerebral hemisphere5.50e-1021
pallium5.50e-1021
anterior neural tube7.12e-1040
regional part of brain1.27e-0946
vessel4.83e-095
epithelial tube open at both ends4.83e-095
blood vessel4.83e-095
vasculature4.83e-095
vascular system4.83e-095
blood vasculature4.83e-095
vascular cord4.83e-095
regional part of forebrain5.13e-0939
forebrain5.13e-0939
future forebrain5.13e-0939
adult organism6.23e-0951
ecto-epithelium1.52e-0873
neurectoderm3.27e-0864
neural plate3.27e-0864
presumptive neural plate3.27e-0864
pre-chordal neural plate6.68e-0849
structure with developmental contribution from neural crest6.91e-0892
central nervous system9.12e-0873
aorta1.05e-074
artery1.05e-074
systemic artery1.05e-074
arterial blood vessel1.05e-074
systemic arterial system1.05e-074
aortic system1.05e-074
arterial system1.05e-074
nervous system2.26e-0775
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