Personal tools

FFCP PHASE1:Mm9::chr10:120748045..120748059,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr10:120748045..120748059,-
|DHSsupport=NA
|short_description=p1@Tbc1d30
|DPIdataset=NA
|description=CAGE_peak_1_at_Tbc1d30_5end
|association_with_transcript=185bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end
|EntrezGene=74694
|EntrezGene=74694
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q69ZT9
|UniProt=Q69ZT9
|association_with_transcript=185bp_to_ENSMUST00000064107,NM_029057,uc007hfm.2_5end
|cluster_id=chr10:120748045..120748059,-
|description=CAGE_peak_1_at_Tbc1d30_5end
|id=chr10:120748045..120748059,-
|ontology_enrichment_celltype=CL:0000117!1.51e-12!23;CL:0000337!1.51e-12!23;CL:0000540!3.56e-09!33;CL:0000047!3.56e-09!33;CL:0000031!3.56e-09!33;CL:0000404!3.56e-09!33;CL:0000221!8.43e-07!44;CL:0000133!8.43e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.98e-16,23;CL:0000337,2.98e-16,23;CL:0000540,9.45e-09,33;CL:0000047,9.45e-09,33;CL:0000031,9.45e-09,33;CL:0000404,9.45e-09,33;CL:0000791,1.66e-07,9;CL:0000789,1.66e-07,9;CL:0002420,1.66e-07,9;CL:0002419,1.66e-07,9;CL:0000790,1.66e-07,9;CL:0000624,4.74e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!4.12e-22!63;UBERON:0004121!8.32e-22!102;UBERON:0000924!8.32e-22!102;UBERON:0006601!8.32e-22!102;UBERON:0001049!2.00e-21!52;UBERON:0005068!2.00e-21!52;UBERON:0006241!2.00e-21!52;UBERON:0007135!2.00e-21!52;UBERON:0002346!3.28e-21!71;UBERON:0003075!3.28e-21!71;UBERON:0007284!3.28e-21!71;UBERON:0001017!5.43e-21!73;UBERON:0005743!5.43e-21!73;UBERON:0000073!7.76e-21!75;UBERON:0001016!7.76e-21!75;UBERON:0000955!7.72e-20!50;UBERON:0006238!7.72e-20!50;UBERON:0002616!3.13e-19!49;UBERON:0003056!5.60e-19!49;UBERON:0002020!2.19e-17!34;UBERON:0007811!1.51e-16!86;UBERON:0003080!2.66e-16!40;UBERON:0002780!1.12e-15!39;UBERON:0001890!1.12e-15!39;UBERON:0006240!1.12e-15!39;UBERON:0000153!2.18e-14!94;UBERON:0002791!3.30e-14!29;UBERON:0003528!3.30e-14!29;UBERON:0001893!3.30e-14!29;UBERON:0000956!3.20e-10!21;UBERON:0001869!3.20e-10!21;UBERON:0000203!3.20e-10!21;UBERON:0002021!1.48e-08!10;UBERON:0000411!1.48e-08!10;UBERON:0001950!1.48e-08!10;UBERON:0002619!2.72e-08!17;UBERON:0000025!7.17e-08!114;UBERON:0004111!4.65e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.16e-27,54;UBERON:0002346,2.27e-26,64;UBERON:0003075,2.27e-26,64;UBERON:0007284,2.27e-26,64;UBERON:0001049,3.43e-26,52;UBERON:0005068,3.43e-26,52;UBERON:0006241,3.43e-26,52;UBERON:0007135,3.43e-26,52;UBERON:0010371,6.12e-26,73;UBERON:0002020,1.41e-23,34;UBERON:0004121,2.58e-23,95;UBERON:0000924,2.58e-23,95;UBERON:0006601,2.58e-23,95;UBERON:0001017,2.20e-22,73;UBERON:0003056,3.66e-22,49;UBERON:0000955,7.88e-22,47;UBERON:0006238,7.88e-22,47;UBERON:0001016,3.04e-21,75;UBERON:0002616,4.75e-21,46;UBERON:0003080,6.65e-20,40;UBERON:0003528,2.73e-19,29;UBERON:0002791,2.73e-19,29;UBERON:0001893,2.73e-19,29;UBERON:0002780,4.40e-19,39;UBERON:0001890,4.40e-19,39;UBERON:0006240,4.40e-19,39;UBERON:0000956,6.24e-14,21;UBERON:0001869,6.24e-14,21;UBERON:0000203,6.24e-14,21;UBERON:0010314,3.29e-13,92;UBERON:0002619,2.44e-11,17;UBERON:0002021,6.43e-11,10;UBERON:0000411,6.43e-11,10;UBERON:0001950,6.43e-11,10;UBERON:0000025,7.34e-09,114;UBERON:0004111,1.14e-07,122;UBERON:0000483,3.68e-07,174;UBERON:0000119,7.58e-07,176;UBERON:0003076,8.11e-07,12;UBERON:0003057,8.11e-07,12
|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,13.9453189316902,23.7932940436317,9.83071010552373,12.1564757440109,2.15384829287408,9.41604014621631,5.24522414513984,0.333109761815663,0,0,0,0.137114433605739,0,5.18764069921526,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,1.43752564364972,0.503347818173209,15.9579671242496,4.36921938885203,0,0,0.515672092277442,9.3065571995415,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,5.49554945234932,5.13022565660425,5.04779907243317,15.1395021734016,10.3808214247258,4.77714116938321,5.65488279007595,6.43453150627015,8.8092704799511,11.6195477657521,10.9060638611933,6.72620067423989,5.03182039813253,3.12548022334056,12.5632349550621,9.00420176050688,9.32069311438542,16.7938293719991,12.386336229522,14.5391567743734,0.302904773332736,0.377857800533928,0.289864488701678,1.72084775396277,0,1.61910957491345,0,0,1.12355536105401,0,0,0,2.25349471642689,0,0,0,1.73192832808971,1.26679932737549,4.04419556011827,1.37020655662872,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,8.78342391034641,4.81727425670947,0,0.239630249011841,0,0,13.9305294646485,21.0450277296568,7.03664371832041,22.7709859451882,23.5258220743904,12.0517065844545,11.1946471516753,0,0,0,11.995185785529,0.260240885925407,0.689706313300419,1.62055916824814,1.65775299619287,4.150226448231,4.09963904911519,4.12287588062807,15.0047955028629,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.402619256281115,11.565947171027,4.93942139420565,0,0,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0.538192240565737,0,9.79191907883005,0,0.162964976442026,0,0.469380496577004,0.837531287209079,1.19021820443007,5.65887578787617,2.99506773801763,3.98636441367795,4.30527875375215,6.882259218061,3.7990696010497,4.62876987460837,0,0,0,0,14.2890025089135,7.85318300167761,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,11.5675673911851,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0.258717367565509,1.71469628025274,1.24138163549592,1.60531935841864,0.987294123612726,1.2178597964584,0,0,0.220528398054962,2.4732937941222,0.484393280087717,1.56813604813205,3.22305328808468,3.11867709515616,0,14.6485988588303,0,0,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,2.86401185404534,0.474503990371703,0.203319467126849,0,0.418176592028937,0,0,0,1.30877970992015,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,5.4685841634459,4.61381115473128,1.20792060413003,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0,0,0.240390899039938,0,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,0,0,0.36630324853453,0,0,27.1080884456192,22.0956113523445,24.0616115644547,22.1690605223357,22.6077231524312,24.1726047164704,18.9006300064906,22.9663813644352,29.0011141749891,18.6393712230655,1.14166082342594,1.19707462020309,1.19513524027894,0.729320151204882,1.67690530102386,1.2869045591501,0.44449345560323,0.824140228955577,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.68554713445788,1.92075457214608,1.55075766180156,3.33405583898152,1.39061191133827,1.15745532278223,1.23625770240992,1.76638704161277,1.37147700954166,0.887379030796687,0.953744759789284,0.145346416632329,1.41164070622996,1.4384483341585,1.09756783723664,1.8414879800649,1.35804113845862,0.561142271657738,1.18635018124174,1.37906275325789,0,2.47898945897546,0.964533054905707,2.24829520144151,2.8071793013449,2.14871054048298,0.956441660344217,0.441182838239031,0.463735671240843
|phase1_expression=0.640595388419176,0,0,0,0,0.839396359559449,0,13.9453189316902,23.7932940436317,9.83071010552373,12.1564757440109,2.15384829287408,9.41604014621631,5.24522414513984,0.333109761815663,0,0,0,0.137114433605739,0,5.18764069921526,0,0,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.55994568650145,1.43752564364972,0.503347818173209,15.9579671242496,4.36921938885203,0,0,0.515672092277442,9.3065571995415,7.40587370980846,3.80298842103708,0,0,0,0,0,0,0,5.49554945234932,5.13022565660425,5.04779907243317,15.1395021734016,10.3808214247258,4.77714116938321,5.65488279007595,6.43453150627015,8.8092704799511,11.6195477657521,10.9060638611933,6.72620067423989,5.03182039813253,3.12548022334056,12.5632349550621,9.00420176050688,9.32069311438542,16.7938293719991,12.386336229522,14.5391567743734,0.302904773332736,0.377857800533928,0.289864488701678,1.72084775396277,0,1.61910957491345,0,0,1.12355536105401,0,0,0,2.25349471642689,0,0,0,1.73192832808971,1.26679932737549,4.04419556011827,1.37020655662872,1.29468941823586,0.148442139064825,0.346970653532272,0.608930956624282,0.230615497256059,0.301445281105245,0.117588707135705,0,0,0.144599356919912,0,0.161766849947409,0,0,0,8.78342391034641,4.81727425670947,0,0.239630249011841,0,0,13.9305294646485,21.0450277296568,7.03664371832041,22.7709859451882,23.5258220743904,12.0517065844545,11.1946471516753,0,0,0,11.995185785529,0.260240885925407,0.689706313300419,1.62055916824814,1.65775299619287,4.150226448231,4.09963904911519,4.12287588062807,15.0047955028629,0,0,0,0.219195732427575,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0,0.402619256281115,11.565947171027,4.93942139420565,0,0,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,0,0,0,0,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0.538192240565737,0,9.79191907883005,0,0.162964976442026,0,0.469380496577004,0.837531287209079,1.19021820443007,5.65887578787617,2.99506773801763,3.98636441367795,4.30527875375215,6.882259218061,3.7990696010497,4.62876987460837,0,0,0,0,14.2890025089135,7.85318300167761,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0.849229592366497,0.404810701674894,0.292255857911312,0.395287777946524,11.5675673911851,0.283880170416537,0,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,1.36175842301515,0.36012218806262,0.258717367565509,1.71469628025274,1.24138163549592,1.60531935841864,0.987294123612726,1.2178597964584,0,0,0.220528398054962,2.4732937941222,0.484393280087717,1.56813604813205,3.22305328808468,3.11867709515616,0,14.6485988588303,0,0,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,2.86401185404534,0.474503990371703,0.203319467126849,0,0.418176592028937,0,0,0,1.30877970992015,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,5.4685841634459,4.61381115473128,1.20792060413003,0.576060012515731,0.316011120628178,0,0,0.129920822977795,0,0,0.240390899039938,0,0,0.15241361331,0,0.0974578807397524,0.192423683280659,0.116876902181569,0.453460767230423,0,0,0,0,0,0.36630324853453,0,0,27.1080884456192,22.0956113523445,24.0616115644547,22.1690605223357,22.6077231524312,24.1726047164704,18.9006300064906,22.9663813644352,29.0011141749891,18.6393712230655,1.14166082342594,1.19707462020309,1.19513524027894,0.729320151204882,1.67690530102386,1.2869045591501,0.44449345560323,0.824140228955577,1.92551525755089,0.505394423527595,1.52087579934144,1.32038438970253,1.68554713445788,1.92075457214608,1.55075766180156,3.33405583898152,1.39061191133827,1.15745532278223,1.23625770240992,1.76638704161277,1.37147700954166,0.887379030796687,0.953744759789284,0.145346416632329,1.41164070622996,1.4384483341585,1.09756783723664,1.8414879800649,1.35804113845862,0.561142271657738,1.18635018124174,1.37906275325789,0,2.47898945897546,0.964533054905707,2.24829520144151,2.8071793013449,2.14871054048298,0.956441660344217,0.441182838239031,0.463735671240843
|short_description=p1@Tbc1d30
}}
}}

Latest revision as of 16:27, 25 September 2015

Short description:p1@Tbc1d30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tbc1d30_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 185bp_to_ENSMUST00000064107, NM_029057, uc007hfm.2_5end
EntrezGene:Tbc1d30
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tbc1d30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.95
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E49.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.91
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.03
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.39
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.54
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.73
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.04
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.78
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.93
corpus striatum, adult.CNhs10487.19-21D821.05
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D522.77
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F212.05
diencephalon, neonate N30.CNhs11201.1388-42B211.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G412.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E811.57
hippocampus, neonate N00.CNhs11228.627-43G14.94
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B19.79
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E64.31
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H24.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C214.29
medulla oblongata, neonate N30.CNhs11200.1396-42A37.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.57
skin, neonate N06.CNhs11097.693-20I53.22
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C914.65
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I45.47
testis, neonate N10.CNhs11204.763-44D94.61
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.10
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A324.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D722.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.16e-2754
neurectoderm2.27e-2664
neural plate2.27e-2664
presumptive neural plate2.27e-2664
neural tube3.43e-2652
neural rod3.43e-2652
future spinal cord3.43e-2652
neural keel3.43e-2652
ecto-epithelium6.12e-2673
gray matter1.41e-2334
ectoderm-derived structure2.58e-2395
ectoderm2.58e-2395
presumptive ectoderm2.58e-2395
central nervous system2.20e-2273
pre-chordal neural plate3.66e-2249
brain7.88e-2247
future brain7.88e-2247
nervous system3.04e-2175
regional part of brain4.75e-2146
anterior neural tube6.65e-2040
brain grey matter2.73e-1929
regional part of telencephalon2.73e-1929
telencephalon2.73e-1929
regional part of forebrain4.40e-1939
forebrain4.40e-1939
future forebrain4.40e-1939
cerebral cortex6.24e-1421
cerebral hemisphere6.24e-1421
pallium6.24e-1421
structure with developmental contribution from neural crest3.29e-1392
regional part of cerebral cortex2.44e-1117
occipital lobe6.43e-1110
visual cortex6.43e-1110
neocortex6.43e-1110
tube7.34e-09114
anatomical conduit1.14e-07122
epithelium3.68e-07174
cell layer7.58e-07176
posterior neural tube8.11e-0712
chordal neural plate8.11e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:120748045..120748059,-&oldid=4201948"