FFCP PHASE1:Mm9::chr5:141306409..141306421,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:141306409..141306421,- to FFCP PHASE1:Mm9::chr5:141306409..141306421,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14673 | |EntrezGene=14673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=646 | |||
|TSSclassifier=NA | |||
|UniProt=P27600 | |UniProt=P27600 | ||
|association_with_transcript=-24bp_to_ENSMUST00000000153,NM_010302,uc009aih.1_5end | |||
|cluster_id=chr5:141306409..141306421,- | |||
|description=CAGE_peak_4_at_Gna12_5end | |||
|id=chr5:141306409..141306421,- | |||
|ontology_enrichment_celltype=CL:0000221!1.50e-07!44;CL:0000133!1.50e-07!44;CL:0002319!1.71e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,8.51e-08,44;CL:0000133,8.51e-08,44;CL:0002319,9.72e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.45e-09!102;UBERON:0000924!3.45e-09!102;UBERON:0006601!3.45e-09!102;UBERON:0000073!3.20e-07!75;UBERON:0001016!3.20e-07!75;UBERON:0001017!6.50e-07!73;UBERON:0005743!6.50e-07!73;UBERON:0000468!8.59e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.09e-08,95;UBERON:0000924,1.09e-08,95;UBERON:0006601,1.09e-08,95;UBERON:0010314,1.11e-08,92;UBERON:0001016,5.05e-07,75 | |||
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|phase1_expression=2.5623815536767,0.697950815278722,0,0.30246421130683,0,0.503637815735669,0.467225281191051,0.258246646883153,0.140788722151667,0.70219357896598,0.171217968225505,0.319088635981346,0.342401459862411,0.437102012094987,0,0.202475267389826,0.699561878128147,0.788655413395594,0.548457734422955,0,1.27564935226605,1.39007331681239,1.04479915655574,0.47997726838022,0.91763712426868,1.14846392823004,0,0.430942465371778,0,0,0,0.635030673459631,1.23012957516914,0,0.288851619751275,0.332469290716985,0.408338712524738,0.837063261473815,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,1.25896817975577,1.62203089951223,2.38610777810186,3.9119567217402,3.2703773457067,3.07560655828261,2.13872888981712,2.65974201088189,2.87505128729943,0.503347818173209,0,0,1.54355661621568,1.71920063963254,0,4.24864567805155,6.34789175126439,3.1691570175309,1.69422266034566,0.889294796111139,1.3498495759221,3.9554654502679,3.5524005747305,2.99600110518405,5.76327457982332,2.7996195323289,4.72520784160917,4.83747411108179,1.99955689082663,2.20868540951614,3.30725157880376,2.1086003624012,1.83843757322004,0,1.27687338085188,1.0752457327937,3.29715719325485,3.11057988248193,1.56274011167028,0.558365998002762,1.12552522006336,1.68078072554491,2.94628585473668,2.27794689278565,2.60959224155421,1.8931548333296,2.26714680320357,1.15945795480671,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.842666520790511,1.87473354835864,1.55871602761721,0.35333957451034,1.83096445709685,1.28326477414318,0,0,1.08245520505607,0.253359865475099,0,0.5709193985953,0,1.63286352971307,3.46970653532272,0.913396434936424,1.38369298353635,2.11011696773672,1.76383060703557,1.38233250462643,1.48316980640624,0.433798070759735,0,1.61766849947409,2.20841518460394,1.45462575940567,0,0.585561594023094,1.04723353406728,0.510914110417183,0.718890747035522,0,0.762421362438388,1.19832511523858,0.457500602818626,4.02093926761166,1.73824320192276,2.04572365864264,2.28566849015516,1.29793010454206,2.74966282395854,0.870848794270651,0.758168275301024,0.631325567659422,3.6433724029557,3.67843367093557,2.16074555766419,3.0140963567143,2.9255694635071,2.0498195245576,2.43624483855295,1.81092359517311,3.01795190105979,2.08016688184601,1.75951124163949,2.6303487891309,2.50242524303038,5.2237824978325,2.05782136407943,2.38841120182192,0,0.257347907114715,1.42081749697796,3.72826390563903,1.87620847984877,1.80062061461015,2.60419209143731,2.16440654922144,2.31400669331067,1.86027155800326,2.14618721119695,2.10177616260905,2.46839774870221,2.13417703302824,2.75633952455909,2.19299981137998,1.75640092232841,2.01309628140558,1.68231958851302,4.83651678182637,0.660837565967596,1.05780226665418,2.98603550749328,1.39342003116263,2.19074684247559,0.80673409849337,0.667134131534611,1.14135375667535,0,0.658795818896044,1.25667604400135,0.994782360205754,2.33956904542944,0,0.648414149624083,0.398282546508734,1.51734320762465,2.05647322697512,1.1270773567308,3.05476991767971,2.52138233317913,2.45475369616115,2.33975187359752,1.18088118383682,1.41298855057237,1.23397163921801,0.889357881261447,0.83422552858047,1.37591296579242,0.449724224769707,1.01430060694251,0.964708639009667,1.01850340712568,0.287696137450811,1.29708181420028,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.757736633841335,0.358794827043824,1.92977408545347,1.10851914099963,1.70542270593436,2.11854469374634,1.69745085775188,1.40814148973101,1.50755631697634,2.38043640886014,3.51240566144038,2.04925687338048,3.32197034473162,3.6674596791222,2.62181303545181,0.690739927463582,2.16973587872267,0,0.54390568381871,0.491764273019036,3.03530420935206,1.28440471990234,1.75817529888305,1.96721934452011,1.00988370881749,1.26203287766503,1.17131623288992,0.646270193198397,1.43381278771531,2.00518806674155,3.11384183867716,1.61924280669958,2.63030272120181,1.18586333383957,1.60660658210904,1.56134093729095,2.13678724400706,4.0721739838394,1.31976098378028,0,1.45668381692989,1.209294227859,2.26326095707078,2.06711325016541,1.84461088766356,2.06742634534577,1.45413491791002,1.78248689192361,0.948110273807448,1.05418608574999,1.03135543248187,2.7235168460303,1.98067203434441,2.58717367565509,4.92975180572662,2.12808280370728,3.38900753443934,2.46823530903181,5.17590413494819,1.64270195644597,1.90648863777438,0.661585194164886,1.48397627647332,1.29171541356724,1.20625849856312,1.55184047204077,2.29797259643086,0.291480836629851,0.741701208042039,0.170870880797853,1.44470807574256,0.925972636848558,1.13021074202815,0.27338845544205,0.686334519619568,0.509935289981566,0.419854356970974,1.10559979043539,0,2.05618395827738,1.82987520414164,1.29606408986162,2.29997125615916,1.09181281873089,1.48350781023303,1.81837602595739,1.83229159388821,0.90730481304255,1.24267862617385,2.81846469342095,1.94371509857172,1.82004339502807,3.88902376688095,2.97067593998782,2.53434188236167,2.34714477291508,3.51551839078665,2.9360616439199,2.89900944991207,1.44015003128933,1.26404448251271,2.63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| ||
|short_description=p4@Gna12 | |||
}} | }} |
Latest revision as of 16:21, 25 September 2015
Short description: | p4@Gna12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gna12_5end |
Coexpression cluster: | MCL_coexpression_mm9:646 |
Association with transcript: | -24bp_to_ENSMUST00000000153, NM_010302, uc009aih.1_5end |
EntrezGene: | Gna12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 8.51e-08 | 44 |
neurectodermal cell | 8.51e-08 | 44 |
neural cell | 9.72e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.09e-08 | 95 |
ectoderm | 1.09e-08 | 95 |
presumptive ectoderm | 1.09e-08 | 95 |
structure with developmental contribution from neural crest | 1.11e-08 | 92 |
nervous system | 5.05e-07 | 75 |