FFCP PHASE1:Mm9::chr8:68141928..68141990,+: Difference between revisions
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{{FFCP|EntrezGene=72925|HGNC=|MCL_coexpression_id=2|UniProt=Q6NZQ8|association_with_transcript=0bp_to_ENSMUST00000110255,ENSMUST00000155804,NM_001166372,uc009lvj.2,uc009lvk.2_5end|description=CAGE_peak_3_at_March1_5end|id=chr8:68141928..68141990,+|ontology_enrichment_celltype=CL:0000117!1.88e-14!23;CL:0000337!1.88e-14!23;CL:0000540!4.11e-14!33;CL:0000047!4.11e-14!33;CL:0000031!4.11e-14!33;CL:0000404!4.11e-14!33;CL:0002319!5.16e-11!43;CL:0000221!1.76e-10!44;CL:0000133!1.76e-10!44;CL:0000393!4.09e-10!39;CL:0000211!4.09e-10!39;CL:0000055!8.39e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-18,23;CL:0000337,2.83e-18,23;CL:0000540,3.58e-15,33;CL:0000047,3.58e-15,33;CL:0000031,3.58e-15,33;CL:0000404,3.58e-15,33;CL:0000393,1.73e-11,39;CL:0000211,1.73e-11,39;CL:0002319,1.21e-09,43;CL:0000221,3.07e-09,44;CL:0000133,3.07e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.05e-29!73;UBERON:0005743!5.05e-29!73;UBERON:0000073!5.45e-29!75;UBERON:0001016!5.45e-29!75;UBERON:0001049!8.34e-25!52;UBERON:0005068!8.34e-25!52;UBERON:0006241!8.34e-25!52;UBERON:0007135!8.34e-25!52;UBERON:0004121!1.27e-24!102;UBERON:0000924!1.27e-24!102;UBERON:0006601!1.27e-24!102;UBERON:0000033!1.88e-23!63;UBERON:0002346!2.17e-23!71;UBERON:0003075!2.17e-23!71;UBERON:0007284!2.17e-23!71;UBERON:0000955!3.44e-23!50;UBERON:0006238!3.44e-23!50;UBERON:0002616!1.21e-22!49;UBERON:0003056!1.36e-21!49;UBERON:0002020!1.06e-20!34;UBERON:0003080!2.07e-19!40;UBERON:0002780!1.30e-18!39;UBERON:0001890!1.30e-18!39;UBERON:0006240!1.30e-18!39;UBERON:0002791!2.49e-17!29;UBERON:0003528!2.49e-17!29;UBERON:0001893!2.49e-17!29;UBERON:0000956!8.80e-12!21;UBERON:0001869!8.80e-12!21;UBERON:0000203!8.80e-12!21;UBERON:0007811!1.82e-11!86;UBERON:0002619!3.59e-10!17;UBERON:0002021!4.86e-10!10;UBERON:0000411!4.86e-10!10;UBERON:0001950!4.86e-10!10;UBERON:0000153!2.33e-09!94;UBERON:0002420!7.43e-07!8;UBERON:0007245!7.43e-07!8;UBERON:0010009!7.43e-07!8;UBERON:0010011!7.43e-07!8;UBERON:0000454!7.43e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.91e-32,54;UBERON:0001017,1.70e-31,73;UBERON:0001049,3.46e-30,52;UBERON:0005068,3.46e-30,52;UBERON:0006241,3.46e-30,52;UBERON:0007135,3.46e-30,52;UBERON:0001016,3.88e-30,75;UBERON:0002346,3.28e-29,64;UBERON:0003075,3.28e-29,64;UBERON:0007284,3.28e-29,64;UBERON:0002020,6.89e-27,34;UBERON:0000955,2.03e-25,47;UBERON:0006238,2.03e-25,47;UBERON:0004121,3.41e-25,95;UBERON:0000924,3.41e-25,95;UBERON:0006601,3.41e-25,95;UBERON:0002616,9.86e-25,46;UBERON:0003080,6.65e-24,40;UBERON:0003056,7.44e-24,49;UBERON:0010371,1.89e-23,73;UBERON:0002780,7.06e-23,39;UBERON:0001890,7.06e-23,39;UBERON:0006240,7.06e-23,39;UBERON:0003528,1.69e-22,29;UBERON:0002791,1.69e-22,29;UBERON:0001893,1.69e-22,29;UBERON:0000956,2.87e-15,21;UBERON:0001869,2.87e-15,21;UBERON:0000203,2.87e-15,21;UBERON:0010314,3.74e-15,92;UBERON:0002619,3.45e-13,17;UBERON:0002021,1.50e-12,10;UBERON:0000411,1.50e-12,10;UBERON:0001950,1.50e-12,10;UBERON:0002420,1.97e-08,8;UBERON:0007245,1.97e-08,8;UBERON:0010009,1.97e-08,8;UBERON:0010011,1.97e-08,8;UBERON:0000454,1.97e-08,8;UBERON:0003076,9.75e-07,12;UBERON:0003057,9.75e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,20.4339625468194,21.6886301501533,15.2119536841483,0,0,0,0,0,0.299600110518405,0.384218305321555,3.94020526772215,3.37514845829227,2.73422449756797,5.99867067247988,11.9269012113871,4.16468717330844,2.68367318851062,6.43453150627015,13.2139057199266,15.5778552463929,14.5926206593431,14.2437190748609,17.9315781460723,23.962015045611,8.65467296904281,25.3243174514256,25.6701056265041,27.6950870345248,20.9286370774681,20.1311401491325,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,2.92780797011547,2.09446706813455,0,0,0,0,29.9581278809645,20.5875271268382,13.1937069718508,31.462201954802,39.6358958862012,22.4411088124325,26.2830846169767,0.203678727700633,0,0,0.841767423545896,0.260240885925407,0.229902104433473,1.26043490863744,2.10986744970001,4.08218994907967,4.09963904911519,2.43624483855295,2.06962696591213,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,0.233530684734339,0,0,0,0,0,0,37.0110309472864,36.2224235575081,0,0,0,0,0.77320476793256,0.201683524623343,0,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.068823748474,14.2998257642488,0,0,0,1.17131623288992,0.430846795465598,1.43381278771531,0.668396022247182,0.849229592366497,1.61924280669958,1.75353514746787,1.97643888973262,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,6.64444808597936,10.995094485821,4.10248280484762,3.1264313914403,0,0,0,0.220528398054962,0,0.645857706783622,0.120625849856312,0,0,0,23.5490133553347,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.418176592028937,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.4751842617067,66.7471592935406,67.6016705858488,53.1026333441995,62.3425092991284,52.877572817279,54.0018000185445,52.6875807772338,52.5645194421677,58.5069152279557,0.103787347584177,4.38927360741134,3.41467211508268,7.05009479498053,3.14419743941973,2.94149613520023,6.22290837844523,7.2112270033613,9.62757628775446,6.57012750585873,8.36481689637791,6.97917463128482,5.99305647807247,6.27446493567719,7.3517400263185,6.19181798667996,5.79421629724277,4.24400285020151,6.59337441285291,6.18235464564469,8.22886205724997,6.03417740941747,5.00715998889374,7.26732083161643,5.55245344450451,6.34609559187574,6.95126296916536,7.10288220882176,5.70377278152619,9.53941861818155,6.4062909787054,6.10727790728493,6.54769669071503,5.73266312388074,3.66522560864169,7.74412791607632,3.97683734357194,4.51229213501426,2.10417165275728,0.441182838239031,0.927471342481686|short_description=p3@March1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72925 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NZQ8 | |||
|association_with_transcript=0bp_to_ENSMUST00000110255,ENSMUST00000155804,NM_001166372,uc009lvj.2,uc009lvk.2_5end | |||
|cluster_id=chr8:68141928..68141990,+ | |||
|description=CAGE_peak_3_at_March1_5end | |||
|id=chr8:68141928..68141990,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.88e-14!23;CL:0000337!1.88e-14!23;CL:0000540!4.11e-14!33;CL:0000047!4.11e-14!33;CL:0000031!4.11e-14!33;CL:0000404!4.11e-14!33;CL:0002319!5.16e-11!43;CL:0000221!1.76e-10!44;CL:0000133!1.76e-10!44;CL:0000393!4.09e-10!39;CL:0000211!4.09e-10!39;CL:0000055!8.39e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.83e-18,23;CL:0000337,2.83e-18,23;CL:0000540,3.58e-15,33;CL:0000047,3.58e-15,33;CL:0000031,3.58e-15,33;CL:0000404,3.58e-15,33;CL:0000393,1.73e-11,39;CL:0000211,1.73e-11,39;CL:0002319,1.21e-09,43;CL:0000221,3.07e-09,44;CL:0000133,3.07e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.05e-29!73;UBERON:0005743!5.05e-29!73;UBERON:0000073!5.45e-29!75;UBERON:0001016!5.45e-29!75;UBERON:0001049!8.34e-25!52;UBERON:0005068!8.34e-25!52;UBERON:0006241!8.34e-25!52;UBERON:0007135!8.34e-25!52;UBERON:0004121!1.27e-24!102;UBERON:0000924!1.27e-24!102;UBERON:0006601!1.27e-24!102;UBERON:0000033!1.88e-23!63;UBERON:0002346!2.17e-23!71;UBERON:0003075!2.17e-23!71;UBERON:0007284!2.17e-23!71;UBERON:0000955!3.44e-23!50;UBERON:0006238!3.44e-23!50;UBERON:0002616!1.21e-22!49;UBERON:0003056!1.36e-21!49;UBERON:0002020!1.06e-20!34;UBERON:0003080!2.07e-19!40;UBERON:0002780!1.30e-18!39;UBERON:0001890!1.30e-18!39;UBERON:0006240!1.30e-18!39;UBERON:0002791!2.49e-17!29;UBERON:0003528!2.49e-17!29;UBERON:0001893!2.49e-17!29;UBERON:0000956!8.80e-12!21;UBERON:0001869!8.80e-12!21;UBERON:0000203!8.80e-12!21;UBERON:0007811!1.82e-11!86;UBERON:0002619!3.59e-10!17;UBERON:0002021!4.86e-10!10;UBERON:0000411!4.86e-10!10;UBERON:0001950!4.86e-10!10;UBERON:0000153!2.33e-09!94;UBERON:0002420!7.43e-07!8;UBERON:0007245!7.43e-07!8;UBERON:0010009!7.43e-07!8;UBERON:0010011!7.43e-07!8;UBERON:0000454!7.43e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.91e-32,54;UBERON:0001017,1.70e-31,73;UBERON:0001049,3.46e-30,52;UBERON:0005068,3.46e-30,52;UBERON:0006241,3.46e-30,52;UBERON:0007135,3.46e-30,52;UBERON:0001016,3.88e-30,75;UBERON:0002346,3.28e-29,64;UBERON:0003075,3.28e-29,64;UBERON:0007284,3.28e-29,64;UBERON:0002020,6.89e-27,34;UBERON:0000955,2.03e-25,47;UBERON:0006238,2.03e-25,47;UBERON:0004121,3.41e-25,95;UBERON:0000924,3.41e-25,95;UBERON:0006601,3.41e-25,95;UBERON:0002616,9.86e-25,46;UBERON:0003080,6.65e-24,40;UBERON:0003056,7.44e-24,49;UBERON:0010371,1.89e-23,73;UBERON:0002780,7.06e-23,39;UBERON:0001890,7.06e-23,39;UBERON:0006240,7.06e-23,39;UBERON:0003528,1.69e-22,29;UBERON:0002791,1.69e-22,29;UBERON:0001893,1.69e-22,29;UBERON:0000956,2.87e-15,21;UBERON:0001869,2.87e-15,21;UBERON:0000203,2.87e-15,21;UBERON:0010314,3.74e-15,92;UBERON:0002619,3.45e-13,17;UBERON:0002021,1.50e-12,10;UBERON:0000411,1.50e-12,10;UBERON:0001950,1.50e-12,10;UBERON:0002420,1.97e-08,8;UBERON:0007245,1.97e-08,8;UBERON:0010009,1.97e-08,8;UBERON:0010011,1.97e-08,8;UBERON:0000454,1.97e-08,8;UBERON:0003076,9.75e-07,12;UBERON:0003057,9.75e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.18764069921526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,20.4339625468194,21.6886301501533,15.2119536841483,0,0,0,0,0,0.299600110518405,0.384218305321555,3.94020526772215,3.37514845829227,2.73422449756797,5.99867067247988,11.9269012113871,4.16468717330844,2.68367318851062,6.43453150627015,13.2139057199266,15.5778552463929,14.5926206593431,14.2437190748609,17.9315781460723,23.962015045611,8.65467296904281,25.3243174514256,25.6701056265041,27.6950870345248,20.9286370774681,20.1311401491325,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0.323533699894818,0,0,0,2.92780797011547,2.09446706813455,0,0,0,0,29.9581278809645,20.5875271268382,13.1937069718508,31.462201954802,39.6358958862012,22.4411088124325,26.2830846169767,0.203678727700633,0,0,0.841767423545896,0.260240885925407,0.229902104433473,1.26043490863744,2.10986744970001,4.08218994907967,4.09963904911519,2.43624483855295,2.06962696591213,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.414251545071004,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.462801338662135,0.697601834251224,0.268273401399619,0.233530684734339,0,0,0,0,0,0,37.0110309472864,36.2224235575081,0,0,0,0,0.77320476793256,0.201683524623343,0,0.570676878337677,0,0.329397909448022,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.068823748474,14.2998257642488,0,0,0,1.17131623288992,0.430846795465598,1.43381278771531,0.668396022247182,0.849229592366497,1.61924280669958,1.75353514746787,1.97643888973262,6.42642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,6.64444808597936,10.995094485821,4.10248280484762,3.1264313914403,0,0,0,0.220528398054962,0,0.645857706783622,0.120625849856312,0,0,0,23.5490133553347,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0.418176592028937,0,0.134864346384821,0,0,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,56.4751842617067,66.7471592935406,67.6016705858488,53.1026333441995,62.3425092991284,52.877572817279,54.0018000185445,52.6875807772338,52.5645194421677,58.5069152279557,0.103787347584177,4.38927360741134,3.41467211508268,7.05009479498053,3.14419743941973,2.94149613520023,6.22290837844523,7.2112270033613,9.62757628775446,6.57012750585873,8.36481689637791,6.97917463128482,5.99305647807247,6.27446493567719,7.3517400263185,6.19181798667996,5.79421629724277,4.24400285020151,6.59337441285291,6.18235464564469,8.22886205724997,6.03417740941747,5.00715998889374,7.26732083161643,5.55245344450451,6.34609559187574,6.95126296916536,7.10288220882176,5.70377278152619,9.53941861818155,6.4062909787054,6.10727790728493,6.54769669071503,5.73266312388074,3.66522560864169,7.74412791607632,3.97683734357194,4.51229213501426,2.10417165275728,0.441182838239031,0.927471342481686 | |||
|short_description=p3@March1 | |||
}} |
Latest revision as of 16:19, 25 September 2015
Short description: | p3@March1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_March1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000110255, ENSMUST00000155804, NM_001166372, uc009lvj.2, uc009lvk.2_5end |
EntrezGene: | March1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.83e-18 | 23 |
neuroblast (sensu Vertebrata) | 2.83e-18 | 23 |
neuron | 3.58e-15 | 33 |
neuronal stem cell | 3.58e-15 | 33 |
neuroblast | 3.58e-15 | 33 |
electrically signaling cell | 3.58e-15 | 33 |
electrically responsive cell | 1.73e-11 | 39 |
electrically active cell | 1.73e-11 | 39 |
neural cell | 1.21e-09 | 43 |
ectodermal cell | 3.07e-09 | 44 |
neurectodermal cell | 3.07e-09 | 44 |