FFCP PHASE1:Mm9::chr10:119638520..119638539,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:119638520..119638539,-
|short_description=p4@Irak3
|description=CAGE_peak_4_at_Irak3_5end
|association_with_transcript=14bp_to_ENSMUST00000135106_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73914 | |EntrezGene=73914 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=296 | |||
|TSSclassifier=NA | |||
|UniProt=D6RCU1 | |UniProt=D6RCU1 | ||
|association_with_transcript=14bp_to_ENSMUST00000135106_5end | |||
|cluster_id=chr10:119638520..119638539,- | |||
|description=CAGE_peak_4_at_Irak3_5end | |||
|id=chr10:119638520..119638539,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.45e-11,9;CL:0000557,1.52e-10,7;CL:0000049,1.82e-10,19;CL:0000988,1.37e-07,32;CL:0002032,1.37e-07,32;CL:0000037,1.37e-07,32;CL:0000837,1.37e-07,32;CL:0000723,8.58e-07,91;CL:0000048,8.58e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.30e-14,3;DOID:4045,7.30e-14,3;DOID:0050686,3.67e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.53e-07!17;UBERON:0000383!5.99e-07!10;UBERON:0002204!6.91e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.73e-12,32;UBERON:0001134,1.45e-11,9;UBERON:0002036,1.45e-11,9;UBERON:0002385,1.45e-11,9;UBERON:0000486,1.45e-11,9;UBERON:0007503,1.45e-11,9;UBERON:0001015,1.45e-11,9;UBERON:0002329,1.45e-11,9;UBERON:0003082,1.45e-11,9;UBERON:0003059,1.45e-11,9;UBERON:0007282,1.45e-11,9;UBERON:0004290,1.45e-11,9;UBERON:0009618,1.45e-11,9;UBERON:0000383,2.15e-10,10;UBERON:0007524,1.97e-09,11;UBERON:0003077,1.97e-09,11;UBERON:0007285,1.97e-09,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,4.60384793810598,5.4693474116666,3.66466620781659,16.4704816648684,5.46436387966757,8.73918635456076,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,1.51004345451963,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.23517741427141,0,1.23597483867187,1.59059292611903,1.76922110389975,0,0.441683036920787,0,0,0,0.209446706813455,0,1.1981512450592,2.39961092397363,1.90605340609597,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,8.4924809347856,7.10408748488982,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0,0.470996183524124,0.123397163921801,0.592905254174298,0,0,0,0.405720242777006,0.482354319504834,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0,0,12.5098307278303,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,2.58138878870081,0,0.441056796109924,0.65954501176592,0.484393280087717,0.120625849856312,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0,0.376736914009382,0.27338845544205,0.915112692826091,0.509935289981566,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,4.60384793810598,5.4693474116666,3.66466620781659,16.4704816648684,5.46436387966757,8.73918635456076,0.125896817975577,0,0.183546752161682,0,0,0,0.194429899074283,0,0,1.51004345451963,0,0,0.514518872071894,1.14613375975503,1.03134418455488,0,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.151143120213571,0.289864488701678,0,1.3599426674155,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0,0,0.23517741427141,0,1.23597483867187,1.59059292611903,1.76922110389975,0,0.441683036920787,0,0,0,0.209446706813455,0,1.1981512450592,2.39961092397363,1.90605340609597,0,0.457500602818626,0,0,0,0,0,0.203678727700633,0.124406970610093,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,8.4924809347856,7.10408748488982,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0,0.470996183524124,0.123397163921801,0.592905254174298,0,0,0,0.405720242777006,0.482354319504834,0,0.287696137450811,0,0.549122826376163,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0,0,12.5098307278303,0,0,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0,0.488660878060728,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0.304464949114599,2.58138878870081,0,0.441056796109924,0.65954501176592,0.484393280087717,0.120625849856312,0.119372344003136,0.328281799490123,0,0.370850604021019,0,0,0,0.376736914009382,0.27338845544205,0.915112692826091,0.509935289981566,0.559805809294632,0.690999869022119,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0.0962118416403295,0,0.680191150845634,0,0,0,0.19318959403219,0.563047426353546,0.549454872801795,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p4@Irak3 | |||
}} | }} |
Latest revision as of 16:13, 25 September 2015
Short description: | p4@Irak3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Irak3_5end |
Coexpression cluster: | MCL_coexpression_mm9:296 |
Association with transcript: | 14bp_to_ENSMUST00000135106_5end |
EntrezGene: | Irak3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.45e-11 | 9 |
granulocyte monocyte progenitor cell | 1.52e-10 | 7 |
common myeloid progenitor | 1.82e-10 | 19 |
hematopoietic cell | 1.37e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.37e-07 | 32 |
hematopoietic stem cell | 1.37e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.37e-07 | 32 |
somatic stem cell | 8.58e-07 | 91 |
multi fate stem cell | 8.58e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.73e-12 | 32 |
skeletal muscle tissue | 1.45e-11 | 9 |
striated muscle tissue | 1.45e-11 | 9 |
muscle tissue | 1.45e-11 | 9 |
multilaminar epithelium | 1.45e-11 | 9 |
epithelial vesicle | 1.45e-11 | 9 |
musculature | 1.45e-11 | 9 |
somite | 1.45e-11 | 9 |
myotome | 1.45e-11 | 9 |
presomitic mesoderm | 1.45e-11 | 9 |
presumptive segmental plate | 1.45e-11 | 9 |
dermomyotome | 1.45e-11 | 9 |
trunk paraxial mesoderm | 1.45e-11 | 9 |
musculature of body | 2.15e-10 | 10 |
dense mesenchyme tissue | 1.97e-09 | 11 |
paraxial mesoderm | 1.97e-09 | 11 |
presumptive paraxial mesoderm | 1.97e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.30e-14 | 3 |
muscle cancer | 7.30e-14 | 3 |
organ system cancer | 3.67e-07 | 6 |