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FFCP PHASE1:Mm9::chr7:111367301..111367340,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:111367301..111367340,+
|DHSsupport=NA
|short_description=p1@Trim6
|DPIdataset=NA
|description=CAGE_peak_1_at_Trim6_5end
|association_with_transcript=0bp_to_ENSMUST00000098180,ENSMUST00000144538,NM_001013616,uc009ivp.1,uc009ivq.1_5end
|EntrezGene=94088
|EntrezGene=94088
|HGNC=
|HGNC=
|MCL_coexpression_id=97
|TSSclassifier=NA
|UniProt=Q8BGE7,D3Z7U8
|UniProt=Q8BGE7,D3Z7U8
|association_with_transcript=0bp_to_ENSMUST00000098180,ENSMUST00000144538,NM_001013616,uc009ivp.1,uc009ivq.1_5end
|cluster_id=chr7:111367301..111367340,+
|description=CAGE_peak_1_at_Trim6_5end
|id=chr7:111367301..111367340,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005156!1.35e-07!26;UBERON:0000990!1.35e-07!26;UBERON:0003133!1.52e-07!24;UBERON:0000991!1.53e-07!18;UBERON:0005564!1.53e-07!18;UBERON:0004176!6.32e-07!17;UBERON:0009196!6.32e-07!17;UBERON:0009117!6.32e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.06e-10,14;UBERON:0000991,1.53e-09,18;UBERON:0005564,1.53e-09,18;UBERON:0003135,7.56e-09,15;UBERON:0003133,1.16e-08,24;UBERON:0004176,1.32e-08,17;UBERON:0009196,1.32e-08,17;UBERON:0009117,1.32e-08,17;UBERON:0003101,4.77e-08,16;UBERON:0000079,4.77e-08,16;UBERON:0005156,1.38e-07,26;UBERON:0000990,1.38e-07,26
|phase1_expression=0,2.09385244583617,0,1.51232105653415,1.00179145989269,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0,0.42438965179803,1.10556277196391,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,0.380046838912748,0.756090389279792,0.665191531965914,0,0,0,0,0.664938581433969,0.408338712524738,1.25559489221072,1.5626706890476,0,0.588231488031014,1.36609096991689,0.971020706062307,1.38486499773135,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,0.85960031981627,0,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,2.31891590961342,1.72084775396277,0,0,0,0,0.561777680527007,0.340860645156116,0,0.70667914902068,0,0,2.54805239706646,0,1.5154372870785,1.52015919285059,0.505524445014783,0.45673551887624,0.776813650941515,0.445326417194474,0.867426633830679,0.608930956624282,0.461230994512117,1.05505848386836,1.05829836422134,0.502666365318702,8.89901883843746,0.144599356919912,0,0.970601099684455,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,3.23500836165985,4.19931911695385,5.33694953706872,0.299581278809645,0,0,0,0.255715457330331,0,0,1.83310854930569,0.622034853050465,0.758168275301024,0.420883711772948,1.30120442962704,0.919608417733892,0,0.452114453507145,0.612328492361951,0.512454881139399,0.374806898238915,0.258703370739016,0.646703978798527,1.32374256117473,0.175951124163949,0,0.278047249225598,0,0.205782136407943,6.36909653819178,5.61770549850588,5.91900186363845,6.25159698670304,5.38527008592305,3.51789089971644,2.88099298337624,0.946978942340841,1.18058539048442,0.925602677324269,1.16266972375204,0.536546802799238,1.40118410840603,1.48103864922132,0.32833492815819,0.56748166682099,0.146199987425332,0.878200461164203,1.34206418760372,0.630869845692382,0.102904612379284,4.29544417878937,0.528901133327089,1.70630600428187,1.39342003116263,0.38660238396628,0.80673409849337,0.667134131534611,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,1.98956472041151,1.9496408711912,0,1.72910439899755,1.99141273254367,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,1.1221731182451,0.822074982615345,0.295220295959204,0.784993639206874,0.740382983530803,0,0.333690211432188,0.393117990226406,0.899448449539415,0.405720242777006,0.72353147925725,0.25462585178142,1.15078454980324,1.78348749452539,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,1.07638448113147,0.964887042726734,2.03228509183265,1.32643988239339,1.14075483509418,0.339490171550376,0.469380496577004,0.670025029767263,1.19021820443007,0.780534591431195,1.7339865851681,1.10732344824387,1.2756381492599,1.47476983244164,1.20879487306127,2.31438493730419,0,0,2.95058563811422,0.827810238914197,0.321101179975584,0.234423373184406,0,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0,0.876767573733936,0.790575555893047,0,0.99358059645788,0.534196811001766,1.46598263418218,0.659880491890142,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,0.922305443831782,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,1.08036656418786,0.388076051348264,0,0.709360934569094,0.891844088010353,0.493647061806363,0.608929898229199,28.1606049676452,12.0744280392378,0.882113592219848,0,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,0.170870880797853,0.412773735926445,1.11116716421827,0,0.410082683163076,0.228778173206523,5.26933132980952,4.89830083132803,5.2515990045681,3.81868247206045,0.949007980743406,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,1.21377911746339,1.65306911450672,1.04702376793612,0.648074866458964,0.621339313086926,2.25477175473676,4.63501292736334,4.30192075188454,3.30567020184881,2.58319646955462,2.53434188236167,4.22486059124714,8.46328501485676,5.97698263226552,5.31485065817213,3.16833006883652,0,2.02725215290164,1.43795340030758,2.07873316764472,1.61124026100733,0.79472541912506,0.240390899039938,0.738447635872886,0.403865799792591,0.381034033274999,0.302478555410522,0.0974578807397524,0.0962118416403295,0.350630706544707,0,45.9510923484314,33.9118377983818,46.8398079655779,0.19318959403219,0.375364950902364,0.915758121336325,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,1.45302286617847,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.824171801606613,0,0.685738504770831,0.532427418478012,0,0.581385666529314,0.564656282491984,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.929621047115796,0.192906610981141,0,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|phase1_expression=0,2.09385244583617,0,1.51232105653415,1.00179145989269,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0,0.42438965179803,1.10556277196391,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0.646413698057667,0.380046838912748,0.756090389279792,0.665191531965914,0,0,0,0,0.664938581433969,0.408338712524738,1.25559489221072,1.5626706890476,0,0.588231488031014,1.36609096991689,0.971020706062307,1.38486499773135,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0,1.39986421625363,1.43752564364972,0,0,0,1.02903774414379,0.85960031981627,0,0,0,0,0,0,0.899899717281399,0,2.1314403448383,0.299600110518405,0.384218305321555,0.103689612308478,0,0,0,0,0.244981598429908,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,2.31891590961342,1.72084775396277,0,0,0,0,0.561777680527007,0.340860645156116,0,0.70667914902068,0,0,2.54805239706646,0,1.5154372870785,1.52015919285059,0.505524445014783,0.45673551887624,0.776813650941515,0.445326417194474,0.867426633830679,0.608930956624282,0.461230994512117,1.05505848386836,1.05829836422134,0.502666365318702,8.89901883843746,0.144599356919912,0,0.970601099684455,0,0.484875253135222,1.86391761218122,0,0,0.510914110417183,3.23500836165985,4.19931911695385,5.33694953706872,0.299581278809645,0,0,0,0.255715457330331,0,0,1.83310854930569,0.622034853050465,0.758168275301024,0.420883711772948,1.30120442962704,0.919608417733892,0,0.452114453507145,0.612328492361951,0.512454881139399,0.374806898238915,0.258703370739016,0.646703978798527,1.32374256117473,0.175951124163949,0,0.278047249225598,0,0.205782136407943,6.36909653819178,5.61770549850588,5.91900186363845,6.25159698670304,5.38527008592305,3.51789089971644,2.88099298337624,0.946978942340841,1.18058539048442,0.925602677324269,1.16266972375204,0.536546802799238,1.40118410840603,1.48103864922132,0.32833492815819,0.56748166682099,0.146199987425332,0.878200461164203,1.34206418760372,0.630869845692382,0.102904612379284,4.29544417878937,0.528901133327089,1.70630600428187,1.39342003116263,0.38660238396628,0.80673409849337,0.667134131534611,1.14135375667535,0.474529061544512,0.329397909448022,1.00534083520108,1.98956472041151,1.9496408711912,0,1.72910439899755,1.99141273254367,1.13800740571849,0.685491075658373,1.1270773567308,1.22190796707189,1.16371492300575,1.1221731182451,0.822074982615345,0.295220295959204,0.784993639206874,0.740382983530803,0,0.333690211432188,0.393117990226406,0.899448449539415,0.405720242777006,0.72353147925725,0.25462585178142,1.15078454980324,1.78348749452539,0.549122826376163,1.43768206527355,1.11642284300551,0.312037673114561,0.505157755894224,1.07638448113147,0.964887042726734,2.03228509183265,1.32643988239339,1.14075483509418,0.339490171550376,0.469380496577004,0.670025029767263,1.19021820443007,0.780534591431195,1.7339865851681,1.10732344824387,1.2756381492599,1.47476983244164,1.20879487306127,2.31438493730419,0,0,2.95058563811422,0.827810238914197,0.321101179975584,0.234423373184406,0,0,0,0.780877488593277,0.430846795465598,0.238968797952552,0,0,0,0.876767573733936,0.790575555893047,0,0.99358059645788,0.534196811001766,1.46598263418218,0.659880491890142,0,0.728341908464944,0.906970670894253,0.565815239267694,0.295301892880773,0.922305443831782,0,0.363533729477506,1.06949213515416,0,0,0,0.340439605753788,1.08036656418786,0.388076051348264,0,0.709360934569094,0.891844088010353,0.493647061806363,0.608929898229199,28.1606049676452,12.0744280392378,0.882113592219848,0,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,1.1659233465194,0.18542530201051,0.170870880797853,0.412773735926445,1.11116716421827,0,0.410082683163076,0.228778173206523,5.26933132980952,4.89830083132803,5.2515990045681,3.81868247206045,0.949007980743406,0.203319467126849,0.216010681643603,0.418176592028937,0.218362563746178,1.21377911746339,1.65306911450672,1.04702376793612,0.648074866458964,0.621339313086926,2.25477175473676,4.63501292736334,4.30192075188454,3.30567020184881,2.58319646955462,2.53434188236167,4.22486059124714,8.46328501485676,5.97698263226552,5.31485065817213,3.16833006883652,0,2.02725215290164,1.43795340030758,2.07873316764472,1.61124026100733,0.79472541912506,0.240390899039938,0.738447635872886,0.403865799792591,0.381034033274999,0.302478555410522,0.0974578807397524,0.0962118416403295,0.350630706544707,0,45.9510923484314,33.9118377983818,46.8398079655779,0.19318959403219,0.375364950902364,0.915758121336325,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0.51776031175182,1.45302286617847,0.399024873401031,0.853668028770671,0.486213434136588,0.419226325255965,0.183843508450014,0.44449345560323,0.618105171716683,0.320919209591815,0.505394423527595,0.25347929989024,0.565879024158229,0.187283014939765,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.824171801606613,0,0.685738504770831,0.532427418478012,0,0.581385666529314,0.564656282491984,0.0846146078916765,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.689531376628944,0.409231043169689,0.929621047115796,0.192906610981141,0,1.16965804222704,0.429742108096597,0.765153328275374,0.220591419119515,0.231867835620421
|short_description=p1@Trim6
}}
}}

Latest revision as of 16:11, 25 September 2015

Short description:p1@Trim6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim6_5end
Coexpression cluster:MCL_coexpression_mm9:97
Association with transcript: 0bp_to_ENSMUST00000098180, ENSMUST00000144538, NM_001013616, uc009ivp.1, uc009ivq.1_5end
EntrezGene:Trim6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A88.90
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.34
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.92
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E95.39
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H22.31
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I728.16
placenta, adult pregnant day17.CNhs10464.577-18G312.07
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.25
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.53
testis, neonate N00.CNhs11189.1300-22B74.22
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D95.98
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C52.08
thymus, embryo E17.CNhs10581.478-18C11.61
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H345.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F733.91
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G546.84
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
testis9.06e-1014
gonad1.53e-0918
gonad primordium1.53e-0918
male reproductive organ7.56e-0915
reproductive organ1.16e-0824
external genitalia1.32e-0817
indifferent external genitalia1.32e-0817
indifferent gonad1.32e-0817
male organism4.77e-0816
male reproductive system4.77e-0816
reproductive structure1.38e-0726
reproductive system1.38e-0726
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