Personal tools

FFCP PHASE1:Mm9::chr19:34658018..34658023,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=15959|HGNC=|MCL_coexpression_id=86|UniProt=Q64345,Q5FW82|association_with_transcript=0bp_to_ENSMUST00000102825,NM_010501,uc008hgo.1_5end|description=CAGE_peak_1_at_Ifit3_5end|id=chr19:34658018..34658023,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.53e-11!51|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-11,51;UBERON:0005256,4.99e-07,45;UBERON:0004119,5.92e-07,118;UBERON:0000925,5.92e-07,118;UBERON:0006595,5.92e-07,118|phase1_expression=0.480446541314382,2.09385244583617,0.454999239389536,4.83942738090928,5.50985302940982,0.16787927191189,0.233612640595526,2.84071311571468,0.703943610758334,0.468129052643987,0.34243593645101,0,21.9136934311943,2.79745287740792,4.33042690360362,4.25198061518635,0.699561878128147,12.6184866143295,6.85572168028694,5.94145512517242,12.161190491603,0.198581902401771,0,2.87986361028132,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,3.23039813075836,2.26827116783938,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,3.76678467663217,1.5626706890476,1.57057123192139,9.41170380849623,8.87959130445979,14.0798002379035,73.6496385157127,67.4156592609772,5.68994931701213,17.2126095756569,0.218025156380447,2.19686182734472,5.44403717407994,6.01941612989059,0,3.52343472721246,2.90144856804538,5.71359458542189,14.406528418013,3.15186783932632,25.7836046138721,0,0,0,0.338844532069132,9.78224275722253,4.04954872776629,6.92206453796882,7.104801149461,2.39680088414724,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.53224805702225,2.15049146558741,0,0,0,0.558365998002762,3.37657566019008,5.34793867218835,0.294628585473668,0,0,20.3703460066265,36.0476341709367,37.3925190425164,39.5794983411438,4.0798280022465,1.07940638327563,6.49776417447669,8.51251085484938,5.61777680527007,1.70430322578058,2.07828803682295,0.70667914902068,0,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,11.3042040921869,18.9024655062435,8.16431764856536,0,0.913396434936424,0.461230994512117,7.08396410597326,5.52666923537813,9.92766071504436,14.8316980640624,28.0522752424629,5.30766331169925,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,5.27005434620785,1.46612694769419,5.8755122697976,0,0,0,5.09288173976397,7.32000964509802,0.376963056338593,3.47648640384553,1.53429274398198,8.51930982694196,1.29793010454206,2.95334155165917,3.23458123586242,8.33985102831127,7.15502310014011,0.520481771850815,0.919608417733892,0.720248519221397,1.35634336052144,1.56483948048054,1.7935920839879,2.34254311399322,5.95017752699736,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.983821158737019,0.154267112887378,0.930135779001631,0.536546802799238,1.5179494507732,0.822799249567402,0.820837320395476,2.02672023864639,3.65499968563331,25.0287131431798,8.45500438190342,3.78521907415429,0.617427674275707,4.29544417878937,34.3785736662608,0,0.464473343720877,0.38660238396628,0.605050573870028,3.11329261382818,21.3052701246066,6.64340686162316,16.6345944271251,29.1548842208313,38.7965120480244,23.0057622800562,29.6610404855893,13.8328351919804,7.76650965692032,0,0.114248512609729,0,0,3.49114476901726,3.71719845418688,1.64414996523069,8.11855813887812,16.4848664233444,8.88459580236964,13.3403682189217,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,2.29163266603278,11.5078454980324,8.43103179230184,4.94210543738547,17.2521847832825,14.5134969590716,5.30464044294753,9.34541848404313,18.1191387657131,10.6137574699941,74.6402888273083,0,0,0.169745085775188,0,0.167506257441816,4.28478553594825,3.90267295715598,2.20689201748667,4.20782910332672,2.39182152986231,25.2349504662237,20.7221978239075,21.4080606700637,164.362499493807,263.250350968255,7.37646409528554,7.72622889653251,5.29816946959713,2.57865710502847,0.163934945376675,4.54447668967871,1.57754109708128,1.17131623288992,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,1.18586333383957,6.74774764485795,4.40014264145633,0.712262414669021,2.28041743095006,12.0428189769951,2.65490276679926,0,0,0.188605079755898,0,3.3817866273832,31.0113951801865,2.54473610634254,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,12.2558258071364,0.540183282093931,0,0.214337035031592,1.24138163549592,0.713475270408282,0.329098041204242,4.26250928760439,14.54964589995,11.0152676849186,3.08739757276947,3.13283880588812,4.35953952078945,1.08563264870681,1.90995750405018,0.328281799490123,36.7265854153612,3.8939313422207,8.03093139749908,1.03193433981611,22.5937323391048,3.20226376907975,5.19438065339896,8.46479240864134,0.679913719975421,0.69975726161829,0.690999869022119,5.72802370809068,0,0.406638934253697,0.108005340821801,0,5.8957892211468,0.809186078308924,4.21532624199213,6.28214260761671,1.94422459937689,8.07741107013003,0.56369293868419,0,0,0,0.258319646955462,0.337912250981556,0.821500670520278,0.2604087696879,0.314578033277133,0,0.576060012515731,15.1685337901526,0.202725215290164,0.718976700153791,7.27556608675652,5.72885426135941,3.9736270956253,7.3319224207181,6.64602872285597,5.45218829719997,6.24895814570999,7.36031151498936,9.25849867027648,7.21588812302471,7.48012173962041,3.17422537061296,0,0.0897138566094757,0,13.1368923941889,25.7124991368119,20.5129819179337,3.42989406526505,7.02200945649509,1.6942555278512,0,0.572895513439397,0.859265911718438,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,2.5888015587591,0,0.798049746802062,0.170733605754134,0,0.628839487883947,0.551530525350042,0.44449345560323,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,1.21647789569252,0.976402972245426,0.476293691283074,0.811190281613988,0.77163688185482,1.64834360321323,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,0.726732083161643,0.941093804153306,0.676916863133412,1.28049581010941,0,0.407412341537585,0.561142271657738,0.237270036248348,0.886540341380071,0,1.08455788830176,0.771626443924566,0.249810577937946,5.38042699424439,5.15690529715916,3.63447830930802,1.76473135295612,1.85494268496337|short_description=p1@Ifit3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15959
|HGNC=
|MCL_coexpression_id=86
|TSSclassifier=NA
|UniProt=Q64345,Q5FW82
|association_with_transcript=0bp_to_ENSMUST00000102825,NM_010501,uc008hgo.1_5end
|cluster_id=chr19:34658018..34658023,+
|description=CAGE_peak_1_at_Ifit3_5end
|id=chr19:34658018..34658023,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!7.53e-11!51
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.49e-11,51;UBERON:0005256,4.99e-07,45;UBERON:0004119,5.92e-07,118;UBERON:0000925,5.92e-07,118;UBERON:0006595,5.92e-07,118
|phase1_expression=0.480446541314382,2.09385244583617,0.454999239389536,4.83942738090928,5.50985302940982,0.16787927191189,0.233612640595526,2.84071311571468,0.703943610758334,0.468129052643987,0.34243593645101,0,21.9136934311943,2.79745287740792,4.33042690360362,4.25198061518635,0.699561878128147,12.6184866143295,6.85572168028694,5.94145512517242,12.161190491603,0.198581902401771,0,2.87986361028132,0.22940928106717,0.57423196411502,0.430761996159075,0.430942465371778,3.23039813075836,2.26827116783938,0.443461021310609,0,0,0,0,0.166234645358492,0.204169356262369,3.76678467663217,1.5626706890476,1.57057123192139,9.41170380849623,8.87959130445979,14.0798002379035,73.6496385157127,67.4156592609772,5.68994931701213,17.2126095756569,0.218025156380447,2.19686182734472,5.44403717407994,6.01941612989059,0,3.52343472721246,2.90144856804538,5.71359458542189,14.406528418013,3.15186783932632,25.7836046138721,0,0,0,0.338844532069132,9.78224275722253,4.04954872776629,6.92206453796882,7.104801149461,2.39680088414724,2.30530983192933,0,0,0,0,0.220868540951614,0,0,0,1.10115880999389,1.53224805702225,2.15049146558741,0,0,0,0.558365998002762,3.37657566019008,5.34793867218835,0.294628585473668,0,0,20.3703460066265,36.0476341709367,37.3925190425164,39.5794983411438,4.0798280022465,1.07940638327563,6.49776417447669,8.51251085484938,5.61777680527007,1.70430322578058,2.07828803682295,0.70667914902068,0,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,11.3042040921869,18.9024655062435,8.16431764856536,0,0.913396434936424,0.461230994512117,7.08396410597326,5.52666923537813,9.92766071504436,14.8316980640624,28.0522752424629,5.30766331169925,0.970601099684455,1.32504911076236,2.90925151881133,5.59175283654366,5.27005434620785,1.46612694769419,5.8755122697976,0,0,0,5.09288173976397,7.32000964509802,0.376963056338593,3.47648640384553,1.53429274398198,8.51930982694196,1.29793010454206,2.95334155165917,3.23458123586242,8.33985102831127,7.15502310014011,0.520481771850815,0.919608417733892,0.720248519221397,1.35634336052144,1.56483948048054,1.7935920839879,2.34254311399322,5.95017752699736,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.710234206755631,0.983821158737019,0.154267112887378,0.930135779001631,0.536546802799238,1.5179494507732,0.822799249567402,0.820837320395476,2.02672023864639,3.65499968563331,25.0287131431798,8.45500438190342,3.78521907415429,0.617427674275707,4.29544417878937,34.3785736662608,0,0.464473343720877,0.38660238396628,0.605050573870028,3.11329261382818,21.3052701246066,6.64340686162316,16.6345944271251,29.1548842208313,38.7965120480244,23.0057622800562,29.6610404855893,13.8328351919804,7.76650965692032,0,0.114248512609729,0,0,3.49114476901726,3.71719845418688,1.64414996523069,8.11855813887812,16.4848664233444,8.88459580236964,13.3403682189217,0.333690211432188,0.196558995113203,0.449724224769707,1.01430060694251,0.482354319504834,2.29163266603278,11.5078454980324,8.43103179230184,4.94210543738547,17.2521847832825,14.5134969590716,5.30464044294753,9.34541848404313,18.1191387657131,10.6137574699941,74.6402888273083,0,0,0.169745085775188,0,0.167506257441816,4.28478553594825,3.90267295715598,2.20689201748667,4.20782910332672,2.39182152986231,25.2349504662237,20.7221978239075,21.4080606700637,164.362499493807,263.250350968255,7.37646409528554,7.72622889653251,5.29816946959713,2.57865710502847,0.163934945376675,4.54447668967871,1.57754109708128,1.17131623288992,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,1.21443210502468,1.46127928955656,1.18586333383957,6.74774764485795,4.40014264145633,0.712262414669021,2.28041743095006,12.0428189769951,2.65490276679926,0,0,0.188605079755898,0,3.3817866273832,31.0113951801865,2.54473610634254,1.42598951353889,1.58018378967908,1.05418608574999,2.06271086496374,12.2558258071364,0.540183282093931,0,0.214337035031592,1.24138163549592,0.713475270408282,0.329098041204242,4.26250928760439,14.54964589995,11.0152676849186,3.08739757276947,3.13283880588812,4.35953952078945,1.08563264870681,1.90995750405018,0.328281799490123,36.7265854153612,3.8939313422207,8.03093139749908,1.03193433981611,22.5937323391048,3.20226376907975,5.19438065339896,8.46479240864134,0.679913719975421,0.69975726161829,0.690999869022119,5.72802370809068,0,0.406638934253697,0.108005340821801,0,5.8957892211468,0.809186078308924,4.21532624199213,6.28214260761671,1.94422459937689,8.07741107013003,0.56369293868419,0,0,0,0.258319646955462,0.337912250981556,0.821500670520278,0.2604087696879,0.314578033277133,0,0.576060012515731,15.1685337901526,0.202725215290164,0.718976700153791,7.27556608675652,5.72885426135941,3.9736270956253,7.3319224207181,6.64602872285597,5.45218829719997,6.24895814570999,7.36031151498936,9.25849867027648,7.21588812302471,7.48012173962041,3.17422537061296,0,0.0897138566094757,0,13.1368923941889,25.7124991368119,20.5129819179337,3.42989406526505,7.02200945649509,1.6942555278512,0,0.572895513439397,0.859265911718438,1.37016503954128,1.5107877947794,1.35004500046361,0.900642406448441,1.81256963593682,2.5888015587591,0,0.798049746802062,0.170733605754134,0,0.628839487883947,0.551530525350042,0.44449345560323,1.03017528619447,0.962757628775446,0.252697211763798,1.01391719956096,1.13175804831646,0.561849044819294,1.21647789569252,0.976402972245426,0.476293691283074,0.811190281613988,0.77163688185482,1.64834360321323,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,0.726732083161643,0.941093804153306,0.676916863133412,1.28049581010941,0,0.407412341537585,0.561142271657738,0.237270036248348,0.886540341380071,0,1.08455788830176,0.771626443924566,0.249810577937946,5.38042699424439,5.15690529715916,3.63447830930802,1.76473135295612,1.85494268496337
|short_description=p1@Ifit3
}}

Latest revision as of 16:03, 25 September 2015

Short description:p1@Ifit3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ifit3_5end
Coexpression cluster:MCL_coexpression_mm9:86
Association with transcript: 0bp_to_ENSMUST00000102825, NM_010501, uc008hgo.1_5end
EntrezGene:Ifit3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ifit3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.84
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.91
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.80
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A212.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.16
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B93.23
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D873.65
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D967.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C114.41
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E76.92
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D920.37
Mouse Schwann, donor2.CNhs12573.11746-123F936.05
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.30
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I39.93
amnion, adult pregnant day17.5.CNhs10488.583-22A814.83
aorta, adult.CNhs10498.46-23H128.05
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H75.88
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D87.32
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F28.52
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.23
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G47.16
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.79
eyeball, neonate N02.CNhs11205.1551-44G82.34
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G12.03
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D325.03
heart, neonate N30.CNhs11202.1390-42D28.46
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A334.38
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F721.31
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E916.63
intestine, neonate N06.CNhs11102.688-20B829.15
intestine, neonate N07.CNhs11095.720-20F238.80
intestine, neonate N10.CNhs11098.755-23A523.01
intestine, neonate N20.CNhs11187.827-18D129.66
intestine, neonate N25.CNhs11121.1352-25E313.83
intestine, neonate N30.CNhs11131.1384-42G17.77
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G73.72
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F316.48
kidney, neonate N30.CNhs11203.1385-42H18.88
liver, adult pregnant day01.CNhs10466.508-5B213.34
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F48.43
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H214.51
liver, neonate N10.CNhs11115.751-24B95.30
liver, neonate N20.CNhs11220.823-25A39.35
liver, neonate N25.CNhs11198.1368-26H118.12
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B174.64
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I64.28
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E52.21
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A425.23
lung, neonate N25.CNhs11119.1359-25C720.72
lung, neonate N30.CNhs11133.1394-42H221.41
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1164.36
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1263.25
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C25.30
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G612.04
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G931.01
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G812.26
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I714.55
placenta, adult pregnant day17.CNhs10464.577-18G311.02
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I136.73
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F222.59
spleen, neonate N10.CNhs11116.752-24D13.20
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C65.90
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A94.22
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I11.94
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B515.17
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C15.73
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F87.33
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C45.45
thymus, neonate N07.CNhs11211.713-19D36.25
thymus, neonate N10.CNhs11194.748-24E47.36
thymus, neonate N20.CNhs11186.820-7A29.26
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G27.48
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E413.14
uterus, adult pregnant day19.CNhs10497.590-15F525.71
uterus, adult.CNhs10509.92-27E520.51
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism4.49e-1151
trunk mesenchyme4.99e-0745
endoderm-derived structure5.92e-07118
endoderm5.92e-07118
presumptive endoderm5.92e-07118
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:34658018..34658023,%2B&oldid=4200935"