FFCP PHASE1:Mm9::chr3:66789569..66789600,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=66880 | |EntrezGene=66880 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DBU6,E0CZ17,Q9CSR8,Q8CFJ0,Q80XR9,Q3TGY1 | |UniProt=Q9DBU6,E0CZ17,Q9CSR8,Q8CFJ0,Q80XR9,Q3TGY1 | ||
|association_with_transcript=0bp_to_ENSMUST00000065074,ENSMUST00000162362,NM_025822,uc008plf.1,uc008plg.1,uc008plh.1,uc008pli.1_5end | |association_with_transcript=0bp_to_ENSMUST00000065074,ENSMUST00000162362,NM_025822,uc008plf.1,uc008plg.1,uc008plh.1,uc008pli.1_5end | ||
|cluster_id=chr3:66789569..66789600,+ | |||
|description=CAGE_peak_1_at_Rsrc1_5end | |description=CAGE_peak_1_at_Rsrc1_5end | ||
|id=chr3:66789569..66789600,+ | |id=chr3:66789569..66789600,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.75e-08!102;UBERON:0000924!3.75e-08!102;UBERON:0006601!3.75e-08!102;UBERON:0000033!4.44e-08!63;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0000025!3.47e-07!114;UBERON:0004111!4.82e-07!122;UBERON:0002021!6.06e-07!10;UBERON:0000411!6.06e-07!10;UBERON:0001950!6.06e-07!10;UBERON:0001049!6.81e-07!52;UBERON:0005068!6.81e-07!52;UBERON:0006241!6.81e-07!52;UBERON:0007135!6.81e-07!52;UBERON:0000955!7.83e-07!50;UBERON:0006238!7.83e-07!50 | |ontology_enrichment_uberon=UBERON:0004121!3.75e-08!102;UBERON:0000924!3.75e-08!102;UBERON:0006601!3.75e-08!102;UBERON:0000033!4.44e-08!63;UBERON:0002346!1.71e-07!71;UBERON:0003075!1.71e-07!71;UBERON:0007284!1.71e-07!71;UBERON:0000025!3.47e-07!114;UBERON:0004111!4.82e-07!122;UBERON:0002021!6.06e-07!10;UBERON:0000411!6.06e-07!10;UBERON:0001950!6.06e-07!10;UBERON:0001049!6.81e-07!52;UBERON:0005068!6.81e-07!52;UBERON:0006241!6.81e-07!52;UBERON:0007135!6.81e-07!52;UBERON:0000955!7.83e-07!50;UBERON:0006238!7.83e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.19e-09,73;UBERON:0004121,2.88e-08,95;UBERON:0000924,2.88e-08,95;UBERON:0006601,2.88e-08,95;UBERON:0010314,3.44e-08,92;UBERON:0002346,9.03e-08,64;UBERON:0003075,9.03e-08,64;UBERON:0007284,9.03e-08,64;UBERON:0000073,2.51e-07,54;UBERON:0000025,3.47e-07,114;UBERON:0004111,4.82e-07,122;UBERON:0002021,6.06e-07,10;UBERON:0000411,6.06e-07,10;UBERON:0001950,6.06e-07,10;UBERON:0001049,6.81e-07,52;UBERON:0005068,6.81e-07,52;UBERON:0006241,6.81e-07,52;UBERON:0007135,6.81e-07,52 | |||
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| |phase1_expression=12.3314612270691,2.09385244583617,0.454999239389536,3.32710632437513,3.50627010962443,4.53274034162102,3.97141489012394,3.35720640948098,1.83025338797167,1.40438715793196,2.73948749160808,3.98860794976682,3.0816131387617,3.93391810885488,3.33109761815663,9.71881283471165,3.49780939064073,8.67520954735154,11.3804979892763,5.09267582157636,6.29320347117916,4.66667470644161,9.66439219814061,2.71987118748791,1.60586496747019,2.29692785646008,1.7230479846363,2.37018355954478,2.85035129184561,3.2763916868791,2.66076612786366,3.17515336729816,6.1506478758457,0,6.35473563452804,2.82598897109437,3.87921776898501,4.18531630736908,0,7.32933241563318,2.94115744015507,4.09827290975067,5.34061388334269,7.05022180663233,7.60326984146359,6.9747765821439,3.12956537739216,3.05235218932625,2.41654801007919,6.02732687130279,3.49966054063406,2.87505128729943,4.02678254538567,5.07753499407941,7.39406358113421,5.91696702882678,11.1748041576115,6.18806510732931,7.08107613008592,5.81890077199236,8.87363964908651,2.71075625655306,3.55717918444456,0.899899717281399,2.96659908770092,3.5524005747305,2.69640099466564,1.92109152660777,6.32506635081714,4.18518408828241,5.8890989178387,10.5690864229407,11.0434270475807,7.34944795289724,8.24271050756833,8.27296907949019,9.91042928994498,19.4084753889485,19.6616362567992,7.64940468835124,9.88066550906024,9.37644067002168,17.588528937087,13.5063026407603,16.3494125121187,11.7851434189467,20.0744069926735,10.0655700745662,8.40560745998343,12.0158780569789,15.0729534124872,9.46466264679525,4.75979933595425,8.09554787456726,11.0461990966104,9.85659151614138,5.33688796500657,8.18065548374677,6.23486411046885,6.71345191569646,9.57735254481427,21.815501160434,73.8935195149272,78.2173373468664,6.061749148314,4.05375784760158,6.0662933401774,5.48082622651488,16.572024553419,11.5784868470563,7.45986905094384,8.22056791442781,5.99600292865752,8.28974523039424,14.4634109776917,8.29399502775858,4.20231445148436,14.1707369781513,6.19227386364912,10.3530783966342,7.06692859073259,6.78825354389311,1.86391761218122,17.8596286177044,15.2896095973822,4.08731288333746,10.0644704584973,4.19931911695385,8.6407754409684,23.9665023047716,21.5025283324754,12.5654352112864,22.4233373048037,16.6215047264715,19.3242881440391,16.3863675698435,12.3225630258883,8.21086006026614,9.60346482047964,9.6803253707778,7.67710613479952,6.89706313300419,12.7844112161798,9.94651797715719,13.8114093277196,14.0925092313335,14.1489604085191,14.4873887613849,7.76044774558232,9.64441008855878,9.85326295318113,10.5213951565236,11.6779844674751,13.5818344943645,7.61393904709391,8.16040493955822,7.72434506044558,11.3233079130475,5.68326998791185,8.28503090142008,9.14651633926275,11.3439098720439,11.8372367792605,10.8220327461072,12.8041703696524,10.2314935690179,10.7309360559848,12.37712629092,8.3925523455875,10.5067177010621,11.1874957173281,8.04099930839328,7.46470391989572,6.57611451925822,18.2952255250791,14.7153595702377,3.30418782983798,5.28901133327089,8.53153002140936,9.98617688999886,8.37638498593607,7.86565746031036,6.44896327150124,3.80451252225118,4.74529061544512,3.78807595865225,6.28338022000674,5.76973768919337,5.26403035221624,7.19055526923377,4.75503709724327,3.78368419183298,4.74169752382704,9.25412952138803,7.88954149711563,11.4044743593376,9.11576689687841,10.6606446233284,9.73842671713562,9.29943932271494,6.43694784149637,5.30607804863742,7.70776830426587,6.67380422864376,6.4864468387357,7.42044970870017,6.8972441272091,4.82354319504834,4.83789118384698,9.20627639842594,7.45822043165163,4.66754402419738,10.0637744569148,14.1413560114031,13.1055822708115,7.07220858251913,8.7904732625737,4.82443521363367,9.42241269849684,6.82169082373745,13.6890580211302,12.3913912615887,11.2651319178481,11.0554129911598,8.80761471278251,11.3177515757523,14.6600684018758,16.3883870340093,11.3212885746816,12.2897486036803,10.1884139300878,6.79850575333104,1.50791283939272,6.52686820582452,5.90117127622843,8.55403913544671,20.7110261084252,20.0431984072667,13.9344703570174,7.06918596172244,6.62567260774139,9.37052986311932,9.26320610251035,12.1874086955802,12.6995244226965,16.7015153165411,6.8817819284732,9.05993159525067,12.2539211163422,20.2432429345738,12.3487874131194,8.01295216502649,13.0309567482861,14.1874305756381,10.619611067197,9.46844481004428,4.23252979750651,9.6188590675508,3.83892460745005,7.68587869859819,8.01127708821486,13.4507479906677,7.84294232446387,13.9056173491759,5.27093042874994,8.25084345985495,8.5109901438447,9.00305470156551,4.13947788104814,6.00143698088458,9.57637261668277,8.38333442729732,10.5311373185357,4.87143918583359,7.50949465803873,6.77862626764225,5.73373834942901,23.5787341706316,15.8235138161987,13.0275917844817,11.2210003362948,13.9519764783302,7.86998258900597,23.7344386573452,5.98048082792484,10.5257302661243,9.07453184111587,7.34636982318295,7.79157098009843,7.0921233694022,8.49892149969276,10.636310376598,9.67399816630967,1.90934123603023,8.22473583310952,6.91286188231286,8.10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| ||
|short_description=p1@Rsrc1 | |short_description=p1@Rsrc1 | ||
}} | }} |
Latest revision as of 16:02, 25 September 2015
Short description: | p1@Rsrc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rsrc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000065074, ENSMUST00000162362, NM_025822, uc008plf.1, uc008plg.1, uc008plh.1, uc008pli.1_5end |
EntrezGene: | Rsrc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.19e-09 | 73 |
ectoderm-derived structure | 2.88e-08 | 95 |
ectoderm | 2.88e-08 | 95 |
presumptive ectoderm | 2.88e-08 | 95 |
structure with developmental contribution from neural crest | 3.44e-08 | 92 |
neurectoderm | 9.03e-08 | 64 |
neural plate | 9.03e-08 | 64 |
presumptive neural plate | 9.03e-08 | 64 |
regional part of nervous system | 2.51e-07 | 54 |
tube | 3.47e-07 | 114 |
anatomical conduit | 4.82e-07 | 122 |
occipital lobe | 6.06e-07 | 10 |
visual cortex | 6.06e-07 | 10 |
neocortex | 6.06e-07 | 10 |
neural tube | 6.81e-07 | 52 |
neural rod | 6.81e-07 | 52 |
future spinal cord | 6.81e-07 | 52 |
neural keel | 6.81e-07 | 52 |