Personal tools

FFCP PHASE1:Mm9::chr5:139471960..139471979,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=18590|HGNC=|UniProt=|association_with_transcript=-5bp_to_ENSMUST00000132051_5end|description=CAGE_peak_3_at_Pdgfa_5end|id=chr5:139471960..139471979,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!1.45e-08!23;UBERON:0001009!1.45e-08!23;UBERON:0007100!8.19e-08!18;UBERON:0000948!8.19e-08!18;UBERON:0005498!8.19e-08!18;UBERON:0004140!8.19e-08!18;UBERON:0009881!8.19e-08!18;UBERON:0004141!8.19e-08!18;UBERON:0003084!8.19e-08!18;UBERON:0007005!8.19e-08!18;UBERON:0004139!8.19e-08!18;UBERON:0004291!8.19e-08!18;UBERON:0005409!1.93e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.95e-09,23;UBERON:0001009,4.95e-09,23;UBERON:0007100,1.73e-08,18;UBERON:0000948,1.73e-08,18;UBERON:0005498,1.73e-08,18;UBERON:0004140,1.73e-08,18;UBERON:0009881,1.73e-08,18;UBERON:0004141,1.73e-08,18;UBERON:0003084,1.73e-08,18;UBERON:0007005,1.73e-08,18;UBERON:0004139,1.73e-08,18;UBERON:0004291,1.73e-08,18|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.60492842261366,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0.809901069559304,0,0,0,0,2.12608225377674,0.0992909512008853,0,0.799962113967033,0,0,1.29228598847722,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0,0,0,2.88851619751275,1.49611180822643,3.06254034393554,0,0,0,0,0,0,2.64383317748712,2.53442328048786,0.734187008646726,0.782391344348039,0.872100625521786,2.63623419281366,1.74986909166855,1.53985063787899,0,0,0,0,0.771778308107841,1.71920063963254,2.06268836910977,0.606949382578793,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,1.97773272513395,2.8419204597844,2.09720077362883,0.768436610643109,0,0,0.210324961351382,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,2.20231761998777,1.0214987046815,1.0752457327937,0.791317726381163,0.640413505216868,0,1.95428099300967,0.56276261003168,2.13917546887534,0.294628585473668,0.427115042397309,0.745597783301202,1.8931548333296,1.28471652181535,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,1.54488862144927,3.74946709671727,1.29893002301434,3.18005617059306,1.12674735821344,0,0,0,1.5154372870785,0.506719730950197,1.01104889002957,0.68510327831436,0,1.48442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0,0.823120949949934,0.753999547978053,1.48316980640624,4.33798070759735,1.76922110389975,1.94120219936891,1.98757366614354,1.45462575940567,3.72783522436244,1.75668478206928,0.628340120440365,2.29911349687732,0.11981512450592,0,0,2.24685959107234,1.37250180845588,0.125654352112864,0.173824320192276,0,2.90903262383384,0.486723789203273,1.42575109390443,2.11491850037158,0.252722758433675,2.73574412652416,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.640568601424249,0.843315521037559,2.06962696591213,0.862271971731369,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,2.43776516565517,1.4404749548556,0.796137067273973,0.702213187313235,0.257347907114715,0,4.34964122324554,2.34526059981096,3.6012412292203,4.97163944728941,4.72234156193769,4.16521204795921,4.41814495025775,7.51165523918934,2.6856028744449,4.11399624783701,2.29834449710733,2.43206428637567,3.36259971078264,1.53685080703735,1.61047702512446,0.630869845692382,0.411618449517138,0.991256348951394,1.32225283331772,0,0.232236671860439,1.28867461322093,1.61346819698674,2.44615848229357,1.33157938278791,3.79623249235609,1.81168850196412,2.5133520880027,3.18330355265841,4.09424582950152,1.79763881730844,1.29682829924817,2.58883655230677,0.569003702859245,0.571242563048644,3.38123207019241,0.814605311381257,1.16371492300575,1.05203729835478,2.27651533647326,1.03327103585722,0.941992367048249,0.863780147452604,0.296452627087149,0.500535317148282,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,8.12914036733061,0.189491411770485,0.651859905768103,0.339490171550376,1.64283173801951,2.34508760418542,4.04674189506223,3.90267295715598,6.46304090835383,5.3151525515706,5.42146213435456,5.40748938561935,5.00786447411097,6.219909519005,1.50791283939272,0,1.96705709207614,1.10374698521893,1.12385412991454,0.820481806145422,1.47541450839008,1.76729649043061,0.631016438832513,0,0.215423397732799,1.19484398976276,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,0.395287777946524,1.92792789853084,1.84522110770749,0.712262414669021,0.977321756121456,7.25868541079156,3.98235415019888,0.728341908464944,1.209294227859,2.26326095707078,5.90603785761546,4.61152721915891,3.35956781118687,2.18120237686503,3.20847640546249,5.05658812697306,8.4334886859999,7.21948802737308,0.680879211507576,0.18006109403131,0.517434735131018,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,1.10264199027481,4.61681508236144,2.74489525383039,1.74907482291652,1.55184047204077,1.64140899745061,1.45740418314925,1.29797711407357,0.170870880797853,1.65109494370578,0.370389054739423,0.188368457004691,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,1.90934123603023,1.26534397432454,1.01659733563424,2.05210147561422,2.50905955217362,2.40198820120795,3.64133735239016,4.71124697634415,4.18809507174447,1.8146096260851,1.86401793926078,0,0.149516546043979,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.821500670520278,0.651021924219751,0.838874755405687,0,0.576060012515731,0.632022241256357,0.810900861160657,0.205421914329655,0,0.537080087002444,0.596044064343795,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0.116876902181569,2.72076460338254,0.665957860122194,0.0897138566094757,1.34307693091263,5.40930863290133,3.75364950902364,4.57879060668163,2.14368379079066,1.50471631210609,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0,1.10306105070008,1.55572709461131,0.824140228955577,1.28367683836726,1.51618327058278,2.5347929989024,1.88626341386076,1.40462261204824,1.72867911493147,1.78049953762401,1.42888107384922,1.85414921511769,1.54327376370964,1.23625770240992,2.64958056241915,1.37147700954166,1.06485483695602,0.715308569841963,0.872078499793971,1.31753132581463,1.52306294205018,1.46342378298218,1.57841826862706,2.17286582153379,1.68342681497322,1.30498519936592,2.1670986122624,2.86461730218783,0.77468420592983,1.35034627686799,0.499621155875892,1.16965804222704,1.28922632428979,1.3390183244819,1.76473135295612,1.62307484934295|short_description=p3@Pdgfa}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18590
|HGNC=
|TSSclassifier=NA
|UniProt=
|association_with_transcript=-5bp_to_ENSMUST00000132051_5end
|cluster_id=chr5:139471960..139471979,-
|description=CAGE_peak_3_at_Pdgfa_5end
|id=chr5:139471960..139471979,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!1.45e-08!23;UBERON:0001009!1.45e-08!23;UBERON:0007100!8.19e-08!18;UBERON:0000948!8.19e-08!18;UBERON:0005498!8.19e-08!18;UBERON:0004140!8.19e-08!18;UBERON:0009881!8.19e-08!18;UBERON:0004141!8.19e-08!18;UBERON:0003084!8.19e-08!18;UBERON:0007005!8.19e-08!18;UBERON:0004139!8.19e-08!18;UBERON:0004291!8.19e-08!18;UBERON:0005409!1.93e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.95e-09,23;UBERON:0001009,4.95e-09,23;UBERON:0007100,1.73e-08,18;UBERON:0000948,1.73e-08,18;UBERON:0005498,1.73e-08,18;UBERON:0004140,1.73e-08,18;UBERON:0009881,1.73e-08,18;UBERON:0004141,1.73e-08,18;UBERON:0003084,1.73e-08,18;UBERON:0007005,1.73e-08,18;UBERON:0004139,1.73e-08,18;UBERON:0004291,1.73e-08,18
|phase1_expression=0.960893082628764,0.348975407639361,0.909998478779072,0.60492842261366,0,1.17515490338323,0.700837921786577,0,0,0,0,0,0,0,0,0.809901069559304,0,0,0,0,2.12608225377674,0.0992909512008853,0,0.799962113967033,0,0,1.29228598847722,0.215471232685889,0.950117097281869,0.756090389279792,0.443461021310609,0,0,0,2.88851619751275,1.49611180822643,3.06254034393554,0,0,0,0,0,0,2.64383317748712,2.53442328048786,0.734187008646726,0.782391344348039,0.872100625521786,2.63623419281366,1.74986909166855,1.53985063787899,0,0,0,0,0.771778308107841,1.71920063963254,2.06268836910977,0.606949382578793,0.528990979272033,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,1.97773272513395,2.8419204597844,2.09720077362883,0.768436610643109,0,0,0.210324961351382,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,2.20231761998777,1.0214987046815,1.0752457327937,0.791317726381163,0.640413505216868,0,1.95428099300967,0.56276261003168,2.13917546887534,0.294628585473668,0.427115042397309,0.745597783301202,1.8931548333296,1.28471652181535,1.15945795480671,0,0.679971333707751,0.539703191637817,0.649776417447669,1.34408066129201,1.54488862144927,3.74946709671727,1.29893002301434,3.18005617059306,1.12674735821344,0,0,0,1.5154372870785,0.506719730950197,1.01104889002957,0.68510327831436,0,1.48442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0,0.823120949949934,0.753999547978053,1.48316980640624,4.33798070759735,1.76922110389975,1.94120219936891,1.98757366614354,1.45462575940567,3.72783522436244,1.75668478206928,0.628340120440365,2.29911349687732,0.11981512450592,0,0,2.24685959107234,1.37250180845588,0.125654352112864,0.173824320192276,0,2.90903262383384,0.486723789203273,1.42575109390443,2.11491850037158,0.252722758433675,2.73574412652416,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.612328492361951,0.640568601424249,0.843315521037559,2.06962696591213,0.862271971731369,0.756424320671277,0.351902248327898,0.43839146485515,0.278047249225598,2.43776516565517,1.4404749548556,0.796137067273973,0.702213187313235,0.257347907114715,0,4.34964122324554,2.34526059981096,3.6012412292203,4.97163944728941,4.72234156193769,4.16521204795921,4.41814495025775,7.51165523918934,2.6856028744449,4.11399624783701,2.29834449710733,2.43206428637567,3.36259971078264,1.53685080703735,1.61047702512446,0.630869845692382,0.411618449517138,0.991256348951394,1.32225283331772,0,0.232236671860439,1.28867461322093,1.61346819698674,2.44615848229357,1.33157938278791,3.79623249235609,1.81168850196412,2.5133520880027,3.18330355265841,4.09424582950152,1.79763881730844,1.29682829924817,2.58883655230677,0.569003702859245,0.571242563048644,3.38123207019241,0.814605311381257,1.16371492300575,1.05203729835478,2.27651533647326,1.03327103585722,0.941992367048249,0.863780147452604,0.296452627087149,0.500535317148282,0,0.224862112384854,0,0.482354319504834,0.25462585178142,0,0,0,0,0,0,0,0,0,8.12914036733061,0.189491411770485,0.651859905768103,0.339490171550376,1.64283173801951,2.34508760418542,4.04674189506223,3.90267295715598,6.46304090835383,5.3151525515706,5.42146213435456,5.40748938561935,5.00786447411097,6.219909519005,1.50791283939272,0,1.96705709207614,1.10374698521893,1.12385412991454,0.820481806145422,1.47541450839008,1.76729649043061,0.631016438832513,0,0.215423397732799,1.19484398976276,0.891194696329576,1.13230612315533,0.404810701674894,1.16902343164525,0.395287777946524,1.92792789853084,1.84522110770749,0.712262414669021,0.977321756121456,7.25868541079156,3.98235415019888,0.728341908464944,1.209294227859,2.26326095707078,5.90603785761546,4.61152721915891,3.35956781118687,2.18120237686503,3.20847640546249,5.05658812697306,8.4334886859999,7.21948802737308,0.680879211507576,0.18006109403131,0.517434735131018,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.23467170806371,0.42366414172764,1.10264199027481,4.61681508236144,2.74489525383039,1.74907482291652,1.55184047204077,1.64140899745061,1.45740418314925,1.29797711407357,0.170870880797853,1.65109494370578,0.370389054739423,0.188368457004691,0.27338845544205,0.915112692826091,0.169978429993855,0.139951452323658,0,1.90934123603023,1.26534397432454,1.01659733563424,2.05210147561422,2.50905955217362,2.40198820120795,3.64133735239016,4.71124697634415,4.18809507174447,1.8146096260851,1.86401793926078,0,0.149516546043979,0.330916980914195,0.583353565032143,0.258319646955462,0.506868376472335,0.821500670520278,0.651021924219751,0.838874755405687,0,0.576060012515731,0.632022241256357,0.810900861160657,0.205421914329655,0,0.537080087002444,0.596044064343795,0.120195449519969,0.295379054349154,0.100966449948148,0.15241361331,0.100826185136841,0.38983152295901,0.0962118416403295,0.116876902181569,2.72076460338254,0.665957860122194,0.0897138566094757,1.34307693091263,5.40930863290133,3.75364950902364,4.57879060668163,2.14368379079066,1.50471631210609,1.12950368523413,0.460325236507177,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.486213434136588,0,1.10306105070008,1.55572709461131,0.824140228955577,1.28367683836726,1.51618327058278,2.5347929989024,1.88626341386076,1.40462261204824,1.72867911493147,1.78049953762401,1.42888107384922,1.85414921511769,1.54327376370964,1.23625770240992,2.64958056241915,1.37147700954166,1.06485483695602,0.715308569841963,0.872078499793971,1.31753132581463,1.52306294205018,1.46342378298218,1.57841826862706,2.17286582153379,1.68342681497322,1.30498519936592,2.1670986122624,2.86461730218783,0.77468420592983,1.35034627686799,0.499621155875892,1.16965804222704,1.28922632428979,1.3390183244819,1.76473135295612,1.62307484934295
|short_description=p3@Pdgfa
}}

Latest revision as of 15:40, 25 September 2015

Short description:p3@Pdgfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Pdgfa_5end
Coexpression cluster:NA
Association with transcript: -5bp_to_ENSMUST00000132051_5end
EntrezGene:Pdgfa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Pdgfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.06
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F91.28
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.34
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C84.72
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G12.30
heart, neonate N16.CNhs11209.782-15G12.43
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.61
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A54.09
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.05
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E56.46
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C75.01
lung, neonate N30.CNhs11133.1394-42H26.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G67.26
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.26
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C34.62
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.05
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A94.71
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I11.81
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.34
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E54.58
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.73
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system4.95e-0923
circulatory system4.95e-0923
primary circulatory organ1.73e-0818
heart1.73e-0818
primitive heart tube1.73e-0818
primary heart field1.73e-0818
anterior lateral plate mesoderm1.73e-0818
heart tube1.73e-0818
heart primordium1.73e-0818
cardiac mesoderm1.73e-0818
cardiogenic plate1.73e-0818
heart rudiment1.73e-0818
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:139471960..139471979,-&oldid=4199856"