FFCP PHASE1:Mm9::chr19:34316179..34316190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11475 | |EntrezGene=11475 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1171 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-143bp_to_uc008hgf.1_5end | |association_with_transcript=-143bp_to_uc008hgf.1_5end | ||
|cluster_id=chr19:34316179..34316190,- | |||
|description=CAGE_peak_4_at_Acta2_5end | |description=CAGE_peak_4_at_Acta2_5end | ||
|id=chr19:34316179..34316190,- | |id=chr19:34316179..34316190,- | ||
|ontology_enrichment_celltype=CL:0000222!4.32e-07!7 | |ontology_enrichment_celltype=CL:0000222!4.32e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,9.11e-20,6;CL:0000187,9.11e-20,6;CL:0000056,9.11e-20,6;CL:0000222,6.23e-17,7;CL:0002494,5.14e-15,3;CL:0000737,5.14e-15,3;CL:0000746,5.14e-15,3;CL:0000513,5.14e-15,3;CL:0000355,3.81e-13,9;CL:0000192,3.37e-07,3;CL:0000359,3.37e-07,3;CL:0002539,3.37e-07,3;CL:0000514,3.37e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.10e-08!23;UBERON:0001009!7.10e-08!23;UBERON:0004872!1.95e-07!33 | |ontology_enrichment_uberon=UBERON:0004535!7.10e-08!23;UBERON:0001009!7.10e-08!23;UBERON:0004872!1.95e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.81e-13,9;UBERON:0002036,3.81e-13,9;UBERON:0002385,3.81e-13,9;UBERON:0000486,3.81e-13,9;UBERON:0007503,3.81e-13,9;UBERON:0001015,3.81e-13,9;UBERON:0002329,3.81e-13,9;UBERON:0003082,3.81e-13,9;UBERON:0003059,3.81e-13,9;UBERON:0007282,3.81e-13,9;UBERON:0004290,3.81e-13,9;UBERON:0009618,3.81e-13,9;UBERON:0000383,8.12e-12,10;UBERON:0007524,9.94e-11,11;UBERON:0003077,9.94e-11,11;UBERON:0007285,9.94e-11,11;UBERON:0000474,1.80e-08,9;UBERON:0001135,3.37e-07,3;UBERON:0004237,3.37e-07,3;UBERON:0004695,3.37e-07,3;UBERON:0002111,3.37e-07,3;UBERON:0004178,3.37e-07,3;UBERON:0003100,5.92e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.62203089951223,0.734187008646726,0,0.218025156380447,2.19686182734472,0.972149495371417,0.279972843250725,0,0,0,0,1.28629718017973,3.15186783932632,2.57836046138721,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,4.1565760736459,4.59341446863442,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.373220911830279,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,1.1937388322469,0.974820435595601,0,0.216138049874694,0.796565093017469,0.189667900953082,0,1.1270773567308,0,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.637819074629948,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0,1.13552068166615,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0.546776910884101,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.627264888043406,0.655087691238533,1.61837215661785,1.48776220305605,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,2.31827512838629,2.62755465631655,1.83151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0.581385666529314,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.62203089951223,0.734187008646726,0,0.218025156380447,2.19686182734472,0.972149495371417,0.279972843250725,0,0,0,0,1.28629718017973,3.15186783932632,2.57836046138721,0,0,0,0.677689064138264,0.889294796111139,0.899899717281399,1.97773272513395,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0.511290967734173,4.1565760736459,4.59341446863442,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0.117588707135705,0,0.741584903203122,0.433798070759735,0,0.161766849947409,0.220841518460394,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.373220911830279,0.252722758433675,0.210441855886474,0,0.229902104433473,0,0,0,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0.828503090142008,0.234526059981096,0.36012412292203,0.473489471170421,0.196764231747404,0,0,0,0.350296027101508,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0.264450566663544,0.426576501070468,0,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,1.42358718463353,0.329397909448022,0.251335208800269,1.1937388322469,0.974820435595601,0,0.216138049874694,0.796565093017469,0.189667900953082,0,1.1270773567308,0,0,0.280543279561274,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.637819074629948,0.327726629431476,0,0.144649058581512,0,0,0,0.275936746304732,0,0,0,0,0,0.390438744296638,0,0,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0,1.13552068166615,0.35613120733451,0.162886959353576,1.48473110675282,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0.164140899745061,0.582961673259701,0,0,0,0,0.188368457004691,0.546776910884101,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0.627264888043406,0.655087691238533,1.61837215661785,1.48776220305605,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.39061315453185,0.104859344425711,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,2.31827512838629,2.62755465631655,1.83151624267265,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.532427418478012,0,0.581385666529314,0,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0,0,0.467863216890817,0.859484216193193,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Acta2 | |short_description=p4@Acta2 | ||
}} | }} |
Latest revision as of 15:40, 25 September 2015
Short description: | p4@Acta2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Acta2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1171 |
Association with transcript: | -143bp_to_uc008hgf.1_5end |
EntrezGene: | Acta2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 9.11e-20 | 6 |
muscle cell | 9.11e-20 | 6 |
myoblast | 9.11e-20 | 6 |
mesodermal cell | 6.23e-17 | 7 |
cardiocyte | 5.14e-15 | 3 |
striated muscle cell | 5.14e-15 | 3 |
cardiac muscle cell | 5.14e-15 | 3 |
cardiac muscle myoblast | 5.14e-15 | 3 |
multi-potent skeletal muscle stem cell | 3.81e-13 | 9 |
smooth muscle cell | 3.37e-07 | 3 |
vascular associated smooth muscle cell | 3.37e-07 | 3 |
aortic smooth muscle cell | 3.37e-07 | 3 |
smooth muscle myoblast | 3.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.81e-13 | 9 |
striated muscle tissue | 3.81e-13 | 9 |
muscle tissue | 3.81e-13 | 9 |
multilaminar epithelium | 3.81e-13 | 9 |
epithelial vesicle | 3.81e-13 | 9 |
musculature | 3.81e-13 | 9 |
somite | 3.81e-13 | 9 |
myotome | 3.81e-13 | 9 |
presomitic mesoderm | 3.81e-13 | 9 |
presumptive segmental plate | 3.81e-13 | 9 |
dermomyotome | 3.81e-13 | 9 |
trunk paraxial mesoderm | 3.81e-13 | 9 |
musculature of body | 8.12e-12 | 10 |
dense mesenchyme tissue | 9.94e-11 | 11 |
paraxial mesoderm | 9.94e-11 | 11 |
presumptive paraxial mesoderm | 9.94e-11 | 11 |
female reproductive system | 1.80e-08 | 9 |
smooth muscle tissue | 3.37e-07 | 3 |
blood vessel smooth muscle | 3.37e-07 | 3 |
arterial system smooth muscle | 3.37e-07 | 3 |
artery smooth muscle tissue | 3.37e-07 | 3 |
aorta smooth muscle tissue | 3.37e-07 | 3 |
female organism | 5.92e-07 | 11 |