FFCP PHASE1:Mm9::chr8:59934817..59934833,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20284 | |EntrezGene=20284 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1202 | |||
|TSSclassifier=NA | |||
|UniProt=O88745,Q543T5 | |UniProt=O88745,Q543T5 | ||
|association_with_transcript=97bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end | |association_with_transcript=97bp_to_ENSMUST00000034023,NM_009136,uc009lst.1_5end | ||
|cluster_id=chr8:59934817..59934833,+ | |||
|description=CAGE_peak_3_at_Scrg1_5end | |description=CAGE_peak_3_at_Scrg1_5end | ||
|id=chr8:59934817..59934833,+ | |id=chr8:59934817..59934833,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.48e-17!44;CL:0000133!1.48e-17!44;CL:0002319!2.76e-17!43;CL:0000055!9.00e-15!50;CL:0000117!8.24e-11!23;CL:0000337!8.24e-11!23;CL:0000540!2.15e-10!33;CL:0000047!2.15e-10!33;CL:0000031!2.15e-10!33;CL:0000404!2.15e-10!33;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39;CL:0002453!1.06e-08!8;CL:0000333!1.06e-08!10;CL:0000095!1.06e-08!10;CL:0000243!1.06e-08!10;CL:0000123!1.06e-08!10;CL:0000125!1.06e-08!10;CL:0000030!1.06e-08!10;CL:0000339!1.06e-08!10;CL:0002321!2.63e-07!70;CL:0000220!2.63e-07!70;CL:0000128!7.41e-07!6;CL:0000126!7.41e-07!6;CL:0000127!7.41e-07!6 | |ontology_enrichment_celltype=CL:0000221!1.48e-17!44;CL:0000133!1.48e-17!44;CL:0002319!2.76e-17!43;CL:0000055!9.00e-15!50;CL:0000117!8.24e-11!23;CL:0000337!8.24e-11!23;CL:0000540!2.15e-10!33;CL:0000047!2.15e-10!33;CL:0000031!2.15e-10!33;CL:0000404!2.15e-10!33;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39;CL:0002453!1.06e-08!8;CL:0000333!1.06e-08!10;CL:0000095!1.06e-08!10;CL:0000243!1.06e-08!10;CL:0000123!1.06e-08!10;CL:0000125!1.06e-08!10;CL:0000030!1.06e-08!10;CL:0000339!1.06e-08!10;CL:0002321!2.63e-07!70;CL:0000220!2.63e-07!70;CL:0000128!7.41e-07!6;CL:0000126!7.41e-07!6;CL:0000127!7.41e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.42e-14,8;CL:0000333,2.91e-11,10;CL:0000095,2.91e-11,10;CL:0000243,2.91e-11,10;CL:0000123,2.91e-11,10;CL:0000125,2.91e-11,10;CL:0000030,2.91e-11,10;CL:0000339,2.91e-11,10;CL:0000128,3.18e-11,6;CL:0000126,3.18e-11,6;CL:0000127,3.18e-11,6;CL:0002319,4.35e-11,43;CL:0000221,1.04e-10,44;CL:0000133,1.04e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.53e-30!102;UBERON:0000924!8.53e-30!102;UBERON:0006601!8.53e-30!102;UBERON:0000073!2.06e-29!75;UBERON:0001016!2.06e-29!75;UBERON:0001017!7.71e-29!73;UBERON:0005743!7.71e-29!73;UBERON:0001049!2.35e-23!52;UBERON:0005068!2.35e-23!52;UBERON:0006241!2.35e-23!52;UBERON:0007135!2.35e-23!52;UBERON:0002020!1.39e-22!34;UBERON:0000033!7.96e-22!63;UBERON:0000955!1.21e-21!50;UBERON:0006238!1.21e-21!50;UBERON:0002616!4.61e-21!49;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0002791!7.97e-19!29;UBERON:0003528!7.97e-19!29;UBERON:0001893!7.97e-19!29;UBERON:0003056!3.26e-14!49;UBERON:0003080!3.75e-14!40;UBERON:0000956!4.62e-14!21;UBERON:0001869!4.62e-14!21;UBERON:0000203!4.62e-14!21;UBERON:0002780!1.52e-13!39;UBERON:0001890!1.52e-13!39;UBERON:0006240!1.52e-13!39;UBERON:0002619!5.28e-13!17;UBERON:0000153!5.94e-13!94;UBERON:0007811!4.59e-12!86;UBERON:0003076!1.29e-10!12;UBERON:0003057!1.29e-10!12;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10 | |ontology_enrichment_uberon=UBERON:0004121!8.53e-30!102;UBERON:0000924!8.53e-30!102;UBERON:0006601!8.53e-30!102;UBERON:0000073!2.06e-29!75;UBERON:0001016!2.06e-29!75;UBERON:0001017!7.71e-29!73;UBERON:0005743!7.71e-29!73;UBERON:0001049!2.35e-23!52;UBERON:0005068!2.35e-23!52;UBERON:0006241!2.35e-23!52;UBERON:0007135!2.35e-23!52;UBERON:0002020!1.39e-22!34;UBERON:0000033!7.96e-22!63;UBERON:0000955!1.21e-21!50;UBERON:0006238!1.21e-21!50;UBERON:0002616!4.61e-21!49;UBERON:0002346!1.21e-20!71;UBERON:0003075!1.21e-20!71;UBERON:0007284!1.21e-20!71;UBERON:0002791!7.97e-19!29;UBERON:0003528!7.97e-19!29;UBERON:0001893!7.97e-19!29;UBERON:0003056!3.26e-14!49;UBERON:0003080!3.75e-14!40;UBERON:0000956!4.62e-14!21;UBERON:0001869!4.62e-14!21;UBERON:0000203!4.62e-14!21;UBERON:0002780!1.52e-13!39;UBERON:0001890!1.52e-13!39;UBERON:0006240!1.52e-13!39;UBERON:0002619!5.28e-13!17;UBERON:0000153!5.94e-13!94;UBERON:0007811!4.59e-12!86;UBERON:0003076!1.29e-10!12;UBERON:0003057!1.29e-10!12;UBERON:0002021!1.26e-08!10;UBERON:0000411!1.26e-08!10;UBERON:0001950!1.26e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.25e-34,73;UBERON:0000073,4.21e-33,54;UBERON:0001016,7.17e-33,75;UBERON:0001049,1.34e-30,52;UBERON:0005068,1.34e-30,52;UBERON:0006241,1.34e-30,52;UBERON:0007135,1.34e-30,52;UBERON:0000955,2.97e-25,47;UBERON:0006238,2.97e-25,47;UBERON:0002616,2.71e-24,46;UBERON:0002020,7.23e-24,34;UBERON:0004121,1.87e-23,95;UBERON:0000924,1.87e-23,95;UBERON:0006601,1.87e-23,95;UBERON:0002346,5.49e-23,64;UBERON:0003075,5.49e-23,64;UBERON:0007284,5.49e-23,64;UBERON:0003528,3.73e-19,29;UBERON:0002791,3.73e-19,29;UBERON:0001893,3.73e-19,29;UBERON:0010371,6.15e-19,73;UBERON:0003080,8.76e-17,40;UBERON:0003076,4.51e-16,12;UBERON:0003057,4.51e-16,12;UBERON:0002619,4.54e-16,17;UBERON:0002780,8.39e-16,39;UBERON:0001890,8.39e-16,39;UBERON:0006240,8.39e-16,39;UBERON:0002021,1.95e-14,10;UBERON:0000411,1.95e-14,10;UBERON:0001950,1.95e-14,10;UBERON:0000956,3.59e-14,21;UBERON:0001869,3.59e-14,21;UBERON:0000203,3.59e-14,21;UBERON:0010314,5.95e-14,92;UBERON:0003056,1.74e-12,49;UBERON:0004733,3.58e-10,6;UBERON:0004732,3.58e-10,6;UBERON:0002028,3.58e-10,6;UBERON:0007277,3.58e-10,6;UBERON:0000025,3.84e-10,114;UBERON:0004111,7.41e-09,122;UBERON:0011216,5.84e-08,194;UBERON:0002037,1.55e-07,4;UBERON:0002680,1.55e-07,4;UBERON:0001895,1.55e-07,4;UBERON:0010092,1.55e-07,4;UBERON:0006215,1.55e-07,4;UBERON:0002240,1.57e-07,6;UBERON:0005174,1.57e-07,6;UBERON:0001137,1.57e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,17.8780628231966,22.8473630043851,30.7199240537368,8.53917171914711,5.75010257459886,0,0,0,0.257259436035947,0,1.54701627683233,0.809265843438391,0,0,0,0,0,0,0,19.7736072942147,16.1371688235053,0.207379224616955,0.270011876663381,0.420649922702764,12.8542942981712,10.3808214247258,0.489963196859816,0.958454710182364,0.919218786610021,6.60695285996332,4.21368215681119,4.91540906419979,0.659431438650969,0.457438218012048,2.6045668527838,5.58365998002762,2.8138130501584,6.1119299110724,4.71405736757868,6.12198227436143,0.372798891650601,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.60289056221049,0.470354828542819,0.125666591329675,0,0,3.5384422077995,4.36770494858005,2.20841518460394,1.93950101254089,0,5.27005434620785,5.44561437714983,0,0,0,0,3.14560342750128,2.74500361691176,2.1361239859187,3.65031072403781,5.11430914660661,3.53239675751252,5.353961681236,0.101839363850316,1.7416975885413,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.43839146485515,1.11218899690239,3.1342694986995,2.05782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,7.99101804543684,1.9551876352064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0.81931657357869,0.690739927463582,0,0,0,0,0.275936746304732,4.0137647496948,6.68106613575558,0,0.252470927204373,0.315508219416257,0,0,1.19484398976276,0.891194696329576,0.849229592366497,0.404810701674894,0.584511715822624,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.301564624640779,0.358117032009409,0.328281799490123,0,9.6421157045465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,8.74617949363636,4.58316410751517,7.21783365843488,2.05524755931193,6.7985450765073,2.70009000092722,4.5032120322422,4.07828168085784,4.14208249401456,0,0,0,0.972426868273176,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0,0.280924522409647,0.192075457214608,0.402048282689293,0.476293691283074,0.231768651889711,0,0,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.964533054905707,0.499621155875892,2.33931608445408,0.859484216193193,5.16478496585877,4.19123696327079,3.70988536992674 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,17.8780628231966,22.8473630043851,30.7199240537368,8.53917171914711,5.75010257459886,0,0,0,0.257259436035947,0,1.54701627683233,0.809265843438391,0,0,0,0,0,0,0,19.7736072942147,16.1371688235053,0.207379224616955,0.270011876663381,0.420649922702764,12.8542942981712,10.3808214247258,0.489963196859816,0.958454710182364,0.919218786610021,6.60695285996332,4.21368215681119,4.91540906419979,0.659431438650969,0.457438218012048,2.6045668527838,5.58365998002762,2.8138130501584,6.1119299110724,4.71405736757868,6.12198227436143,0.372798891650601,0.075726193333184,0.529000920747499,0,0,0,0,0,0,0.702222100658759,0,0,0,0.281686839553361,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.60289056221049,0.470354828542819,0.125666591329675,0,0,3.5384422077995,4.36770494858005,2.20841518460394,1.93950101254089,0,5.27005434620785,5.44561437714983,0,0,0,0,3.14560342750128,2.74500361691176,2.1361239859187,3.65031072403781,5.11430914660661,3.53239675751252,5.353961681236,0.101839363850316,1.7416975885413,0,0.210441855886474,0,0.229902104433473,0,0.150704817835715,0.204109497453984,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0.175951124163949,0.43839146485515,1.11218899690239,3.1342694986995,2.05782136407943,0,0,0,0,0,0,0,0,0,0.308534225774757,0,0,0,0,0.164167464079095,0,0,0,0,7.99101804543684,1.9551876352064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0,0,0.81931657357869,0.690739927463582,0,0,0,0,0.275936746304732,4.0137647496948,6.68106613575558,0,0.252470927204373,0.315508219416257,0,0,1.19484398976276,0.891194696329576,0.849229592366497,0.404810701674894,0.584511715822624,0,1.92792789853084,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0.301564624640779,0.358117032009409,0.328281799490123,0,9.6421157045465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0.205421914329655,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,5.64751842617067,8.74617949363636,4.58316410751517,7.21783365843488,2.05524755931193,6.7985450765073,2.70009000092722,4.5032120322422,4.07828168085784,4.14208249401456,0,0,0,0.972426868273176,0.209613162627982,0.735374033800057,0.44449345560323,0.412070114477788,0.64183841918363,0,0,0,0.280924522409647,0.192075457214608,0.402048282689293,0.476293691283074,0.231768651889711,0,0,0,0,0,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0.548783918618318,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0.154936841185966,0.964533054905707,0.499621155875892,2.33931608445408,0.859484216193193,5.16478496585877,4.19123696327079,3.70988536992674 | ||
|short_description=p3@Scrg1 | |short_description=p3@Scrg1 | ||
}} | }} |
Latest revision as of 15:36, 25 September 2015
Short description: | p3@Scrg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scrg1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1202 |
Association with transcript: | 97bp_to_ENSMUST00000034023, NM_009136, uc009lst.1_5end |
EntrezGene: | Scrg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.42e-14 | 8 |
migratory neural crest cell | 2.91e-11 | 10 |
neuron associated cell | 2.91e-11 | 10 |
glial cell (sensu Vertebrata) | 2.91e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 2.91e-11 | 10 |
glial cell | 2.91e-11 | 10 |
glioblast | 2.91e-11 | 10 |
glioblast (sensu Vertebrata) | 2.91e-11 | 10 |
oligodendrocyte | 3.18e-11 | 6 |
macroglial cell | 3.18e-11 | 6 |
astrocyte | 3.18e-11 | 6 |
neural cell | 4.35e-11 | 43 |
ectodermal cell | 1.04e-10 | 44 |
neurectodermal cell | 1.04e-10 | 44 |