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FFCP PHASE1:Mm9::chr2:12341083..12341101,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=66960
|EntrezGene=66960
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9CV28,D6RCI2
|UniProt=Q9CV28,D6RCI2
|association_with_transcript=0bp_to_ENSMUST00000028105,ENSMUST00000154899,NM_024185,uc008ijn.1,uc008ijo.1,uc008ijp.1,uc008ijq.1,uc008ijr.1,uc008ijs.1_5end
|association_with_transcript=0bp_to_ENSMUST00000028105,ENSMUST00000154899,NM_024185,uc008ijn.1,uc008ijo.1,uc008ijp.1,uc008ijq.1,uc008ijr.1,uc008ijs.1_5end
|cluster_id=chr2:12341083..12341101,-
|description=CAGE_peak_3_at_Fam188a_5end
|description=CAGE_peak_3_at_Fam188a_5end
|id=chr2:12341083..12341101,-
|id=chr2:12341083..12341101,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.05e-15!52;UBERON:0005068!1.05e-15!52;UBERON:0006241!1.05e-15!52;UBERON:0007135!1.05e-15!52;UBERON:0000033!3.69e-15!63;UBERON:0000955!1.38e-14!50;UBERON:0006238!1.38e-14!50;UBERON:0002616!5.82e-14!49;UBERON:0000073!1.34e-13!75;UBERON:0001016!1.34e-13!75;UBERON:0002020!2.65e-13!34;UBERON:0001017!3.38e-13!73;UBERON:0005743!3.38e-13!73;UBERON:0002346!2.03e-12!71;UBERON:0003075!2.03e-12!71;UBERON:0007284!2.03e-12!71;UBERON:0004121!2.33e-12!102;UBERON:0000924!2.33e-12!102;UBERON:0006601!2.33e-12!102;UBERON:0003080!2.98e-11!40;UBERON:0003056!4.57e-11!49;UBERON:0002791!6.30e-11!29;UBERON:0003528!6.30e-11!29;UBERON:0001893!6.30e-11!29;UBERON:0002780!1.19e-10!39;UBERON:0001890!1.19e-10!39;UBERON:0006240!1.19e-10!39;UBERON:0004111!1.50e-08!122;UBERON:0002021!1.49e-07!10;UBERON:0000411!1.49e-07!10;UBERON:0001950!1.49e-07!10;UBERON:0000025!2.42e-07!114;UBERON:0000956!2.46e-07!21;UBERON:0001869!2.46e-07!21;UBERON:0000203!2.46e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.03e-16,54;UBERON:0001049,1.00e-15,52;UBERON:0005068,1.00e-15,52;UBERON:0006241,1.00e-15,52;UBERON:0007135,1.00e-15,52;UBERON:0002346,1.06e-13,64;UBERON:0003075,1.06e-13,64;UBERON:0007284,1.06e-13,64;UBERON:0001016,1.16e-13,75;UBERON:0002020,2.55e-13,34;UBERON:0000955,2.55e-13,47;UBERON:0006238,2.55e-13,47;UBERON:0001017,2.91e-13,73;UBERON:0004121,3.28e-13,95;UBERON:0000924,3.28e-13,95;UBERON:0006601,3.28e-13,95;UBERON:0002616,1.04e-12,46;UBERON:0010371,9.56e-12,73;UBERON:0010314,1.27e-11,92;UBERON:0003080,2.88e-11,40;UBERON:0003056,5.19e-11,49;UBERON:0003528,6.11e-11,29;UBERON:0002791,6.11e-11,29;UBERON:0001893,6.11e-11,29;UBERON:0002780,1.15e-10,39;UBERON:0001890,1.15e-10,39;UBERON:0006240,1.15e-10,39;UBERON:0004111,1.47e-08,122;UBERON:0002021,1.46e-07,10;UBERON:0000411,1.46e-07,10;UBERON:0001950,1.46e-07,10;UBERON:0000025,2.38e-07,114;UBERON:0000956,2.41e-07,21;UBERON:0001869,2.41e-07,21;UBERON:0000203,2.41e-07,21
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4107130380836,2.59229946583586,4.97071450469541,4.50954350947352,0.897099276263873,2.15096037594227,2.13896307178452,1.29159823477731,2.19642963138012,3.52071715937262,1.43224823328345,2.30690557736564,5.07326653734613,3.16833006883652,0.948033361884535,2.22997736819181,1.64337531463724,2.46849563657811,1.79026695667481,0.79472541912506,1.80293174279953,1.9199638532695,2.1202954489111,1.600342939755,1.51239277705261,1.46186821109629,1.15454209968395,1.8700304349051,2.72076460338254,0.665957860122194,0.986852422704233,0.839423081820392,3.28422309854724,1.31377732815827,3.47988086107804,3.21552568618599,3.00943262421218,7.90652579663893,7.36520378411483,4.58316410751517,9.28007184655913,9.59115527678899,7.55393897389701,10.8003600037089,6.30449684513909,9.06284817968409,6.21312374102184,1.86817225651518,3.59122386060928,2.39027048055788,2.67417388775123,2.09613162627982,3.30918315210025,3.33370091702423,2.88449080134452,1.28367683836726,2.27427490587418,2.5347929989024,3.01802146217722,2.99652823903624,3.3293079250532,3.9056118889817,4.28664322154766,2.89710814862139,1.73618298417335,2.06042950401653,3.82717192349433,1.71434626192708,2.48466128623072,3.81497903915713,2.0348498328526,2.82328141245992,2.28459441307527,2.74391959309159,2.89376682581627,2.8518863907631,3.36685362994643,3.44041552560105,4.0386837773981,2.45538625901814,3.25367366490529,2.50778594275484,2.74791635731741,1.87145286756327,4.29742108096597,2.48674831689496,2.42650561031467,2.78241402744506
|phase1_expression=2.5623815536767,4.53668029931169,2.72999543633722,1.81478526784098,2.00358291978539,2.18243053485457,1.86890112476421,0.903863264091034,0.422366166455,0.234064526321993,0.34243593645101,0.319088635981346,1.36960583944965,0.786783621770977,0,0.809901069559304,0,1.89277299214943,1.37114433605739,0.84877930359606,3.656861476496,1.68794617041505,1.30599894569468,2.07990149631429,3.67054849707472,1.72269589234506,5.1691439539089,2.58565479223067,3.04037471130198,2.26827116783938,1.33038306393183,0.635030673459631,0,0,1.44425809875637,1.32987716286794,1.42918549383658,2.09265815368454,3.1253413780952,3.66466620781659,5.88231488031014,3.41522742479223,1.45653105909346,1.76255545165808,1.52065396829272,3.12029478674859,3.12956537739216,1.74420125104357,2.41654801007919,3.4997381833371,2.79972843250725,2.87505128729943,1.00669563634642,1.45072428402269,1.00828139742739,1.80081605225163,1.43266719969378,6.18806510732931,3.64169629547276,2.64495489636016,2.53532561402472,1.0165335962074,0.889294796111139,1.7997994345628,0,2.1314403448383,2.69640099466564,2.68952813725088,4.14758449233911,2.43010688997043,3.36519938162211,5.71301968807607,6.18431914664518,2.57230678351403,2.30029130443767,1.83843757322004,3.30347642998166,6.00130489000382,7.68032666281217,4.61602007055678,4.20843160571084,6.25096044668112,6.70039197603314,3.37657566019008,7.33431589328689,4.71405736757868,6.26435395516053,3.91438836233131,3.18050011999373,3.55186332501892,2.6087803983151,1.72084775396277,1.3599426674155,3.77792234146472,2.59910566979068,2.68816132258401,2.94933282276679,3.40860645156115,1.29893002301434,3.5333957451034,5.63373679106722,3.84979432242953,2.54805239706646,0,1.5154372870785,2.02687892380079,2.52762222507392,2.74041311325744,4.66088190564909,4.00793775475027,1.21439728736295,3.04465478312141,0.922461989024234,1.65794904607885,2.93971767839262,2.89033160058254,4.6967043869531,4.04878199375753,0,2.10296904931632,2.20841518460394,0.969750506270444,3.72783522436244,5.5628351432194,6.0739544975902,1.02182822083437,0.479260498023681,1.79970819298022,0.635351135365324,8.53806644607489,6.8625090422794,5.27748278874031,7.47444576826789,7.41574826257959,6.44142938134636,8.27430441645564,2.54598409625791,1.61729061793121,4.80173241023982,3.78795340595653,0.910843100738926,2.75882525320168,2.34080768746954,3.61691562805716,4.150226448231,2.562274405697,2.90475346135159,3.3631438196072,1.5089759505299,2.08016688184601,1.58356011747554,1.7535658594206,2.50242524303038,2.43776516565517,2.46938563689532,3.18454826909589,1.40442637462647,0.51469581422943,0.284163499395593,2.89976081549703,1.87620847984877,1.2604344302271,2.84093682702252,2.16440654922144,2.1597395804233,1.62773761325285,4.56064782379353,4.43708300995244,2.30383789878873,5.08919138645195,3.24275238183423,2.77779976108131,1.53685080703735,3.48936688776967,10.3042074796422,4.6307075570678,6.60837565967596,2.3800550999719,1.49301775374664,2.09013004674395,1.80414445850931,3.83198696784351,2.44615848229357,3.23383564391351,2.37264530772256,2.63518327558417,3.01602250560323,3.78017296878187,3.70431765526328,1.79763881730844,2.16138049874694,2.38969527905241,1.32767530667157,2.28497025219458,1.1270773567308,2.24016460629846,2.32742984601151,3.50679099451593,4.99568643281633,5.31396532726568,6.27994911365499,3.45512058981041,2.37162101669719,1.16791574001266,0.589676985339609,1.57403478669398,1.01430060694251,0.72353147925725,0.763877555344259,1.72617682470486,0.810676133875177,2.19649130550465,0,2.60498663367952,1.5601883655728,2.27320990152401,3.76734568396016,2.8946611281802,2.21703828199926,1.32643988239339,1.62964976442026,2.37643120085263,1.17345124144251,3.1826188913945,3.57065461329021,2.34160377429359,3.94087860265477,2.43611158613652,5.74037167166954,2.62181303545181,4.66249451037918,2.4590339958857,3.01582567878545,1.08781136763742,0.491764273019036,1.93155722413313,7.70642831941401,4.21962071731931,2.13115428989678,2.7771801992481,0.315508219416257,1.56175497718655,2.36965737506079,0.477937595905104,2.67358408898873,3.67999490025482,0.809621403349789,0.584511715822624,2.76701444562566,8.03303291054518,4.5420827266646,1.95872164033981,3.4206261464251,3.62934270539578,2.65490276679926,2.18502572539483,2.41858845571801,2.07465587731488,0.885905678642318,3.07435147943927,5.42699415653264,3.27180356529755,3.92147116223193,3.47640433729398,1.05418608574999,1.03135543248187,5.7874732978144,1.8006109403131,1.55230420539305,2.57204442037911,3.19212420556092,2.85390108163313,2.13913726782757,3.04464949114599,2.3467170806371,3.81297727554876,3.08739757276947,2.30840754118072,2.58343082713449,2.53314284698255,2.02932984805332,1.80554989719567,2.33184669303881,7.78786268444141,1.02522528478712,3.30218988741156,1.85194527369712,1.31857919903284,1.77702496037333,1.60144721244566,0.509935289981566,0.69975726161829,0.690999869022119,2.86401185404534,2.84702394223022,2.84647253977588,3.24016022465404,3.3454127362315,2.40198820120795,2.15782954215713,3.2234847732881,3.14107130380836,2.59229946583586,4.97071450469541,4.50954350947352,0.897099276263873,2.15096037594227,2.13896307178452,1.29159823477731,2.19642963138012,3.52071715937262,1.43224823328345,2.30690557736564,5.07326653734613,3.16833006883652,0.948033361884535,2.22997736819181,1.64337531463724,2.46849563657811,1.79026695667481,0.79472541912506,1.80293174279953,1.9199638532695,2.1202954489111,1.600342939755,1.51239277705261,1.46186821109629,1.15454209968395,1.8700304349051,2.72076460338254,0.665957860122194,0.986852422704233,0.839423081820392,3.28422309854724,1.31377732815827,3.47988086107804,3.21552568618599,3.00943262421218,7.90652579663893,7.36520378411483,4.58316410751517,9.28007184655913,9.59115527678899,7.55393897389701,10.8003600037089,6.30449684513909,9.06284817968409,6.21312374102184,1.86817225651518,3.59122386060928,2.39027048055788,2.67417388775123,2.09613162627982,3.30918315210025,3.33370091702423,2.88449080134452,1.28367683836726,2.27427490587418,2.5347929989024,3.01802146217722,2.99652823903624,3.3293079250532,3.9056118889817,4.28664322154766,2.89710814862139,1.73618298417335,2.06042950401653,3.82717192349433,1.71434626192708,2.48466128623072,3.81497903915713,2.0348498328526,2.82328141245992,2.28459441307527,2.74391959309159,2.89376682581627,2.8518863907631,3.36685362994643,3.44041552560105,4.0386837773981,2.45538625901814,3.25367366490529,2.50778594275484,2.74791635731741,1.87145286756327,4.29742108096597,2.48674831689496,2.42650561031467,2.78241402744506
|short_description=p3@Fam188a
|short_description=p3@Fam188a
}}
}}

Latest revision as of 15:35, 25 September 2015

Short description:p3@Fam188a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam188a_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000028105, ENSMUST00000154899, NM_024185, uc008ijn.1, uc008ijo.1, uc008ijp.1, uc008ijq.1, uc008ijr.1, uc008ijs.1_5end
EntrezGene:Fam188a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam188a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.56
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.79
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I22.59
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C12.27
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.37
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.18
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.62
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.33
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D93.18
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.63
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A48.54
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D57.47
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F26.44
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B24.80
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.90
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E21.58
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.50
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I63.18
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E92.90
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C62.16
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E34.44
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E810.30
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.70
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.24
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.51
kidney, neonate N10.CNhs11206.758-6D55.00
kidney, neonate N20.CNhs11113.832-19I15.31
kidney, neonate N25.CNhs11122.1353-25F36.28
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.01
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G22.20
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C52.38
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C27.71
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I74.54
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I43.42
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.53
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C97.79
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C13.30
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A93.22
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I12.59
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I51.29
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F81.80
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C42.12
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.51
thymus, neonate N20.CNhs11186.820-7A21.46
thymus, neonate N25.CNhs11125.1362-25G71.15
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B42.72
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E53.48
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.80
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.03e-1654
neural tube1.00e-1552
neural rod1.00e-1552
future spinal cord1.00e-1552
neural keel1.00e-1552
neurectoderm1.06e-1364
neural plate1.06e-1364
presumptive neural plate1.06e-1364
nervous system1.16e-1375
gray matter2.55e-1334
brain2.55e-1347
future brain2.55e-1347
central nervous system2.91e-1373
ectoderm-derived structure3.28e-1395
ectoderm3.28e-1395
presumptive ectoderm3.28e-1395
regional part of brain1.04e-1246
ecto-epithelium9.56e-1273
structure with developmental contribution from neural crest1.27e-1192
anterior neural tube2.88e-1140
pre-chordal neural plate5.19e-1149
brain grey matter6.11e-1129
regional part of telencephalon6.11e-1129
telencephalon6.11e-1129
regional part of forebrain1.15e-1039
forebrain1.15e-1039
future forebrain1.15e-1039
anatomical conduit1.47e-08122
occipital lobe1.46e-0710
visual cortex1.46e-0710
neocortex1.46e-0710
tube2.38e-07114
cerebral cortex2.41e-0721
cerebral hemisphere2.41e-0721
pallium2.41e-0721
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