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FFCP PHASE1:Mm9::chr11:71949307..71949338,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=327958
|EntrezGene=327958
|HGNC=
|HGNC=
|MCL_coexpression_id=238
|TSSclassifier=NA
|UniProt=Q3UHE1
|UniProt=Q3UHE1
|association_with_transcript=-27bp_to_ENSMUST00000075258,ENSMUST00000142471_5end
|association_with_transcript=-27bp_to_ENSMUST00000075258,ENSMUST00000142471_5end
|cluster_id=chr11:71949307..71949338,-
|description=CAGE_peak_1_at_Pitpnm3_5end
|description=CAGE_peak_1_at_Pitpnm3_5end
|id=chr11:71949307..71949338,-
|id=chr11:71949307..71949338,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.91e-11!63;UBERON:0001049!4.96e-11!52;UBERON:0005068!4.96e-11!52;UBERON:0006241!4.96e-11!52;UBERON:0007135!4.96e-11!52;UBERON:0001017!8.12e-11!73;UBERON:0005743!8.12e-11!73;UBERON:0004121!1.25e-10!102;UBERON:0000924!1.25e-10!102;UBERON:0006601!1.25e-10!102;UBERON:0000955!1.91e-10!50;UBERON:0006238!1.91e-10!50;UBERON:0000073!3.38e-10!75;UBERON:0001016!3.38e-10!75;UBERON:0002616!7.60e-10!49;UBERON:0002020!2.11e-09!34;UBERON:0002346!9.44e-09!71;UBERON:0003075!9.44e-09!71;UBERON:0007284!9.44e-09!71;UBERON:0005178!7.14e-08!17;UBERON:0005181!7.14e-08!17;UBERON:0002224!7.14e-08!17;UBERON:0000915!7.14e-08!17;UBERON:0008947!7.14e-08!17;UBERON:0003258!7.14e-08!17;UBERON:0002791!2.49e-07!29;UBERON:0003528!2.49e-07!29;UBERON:0001893!2.49e-07!29;UBERON:0002021!3.23e-07!10;UBERON:0000411!3.23e-07!10;UBERON:0001950!3.23e-07!10;UBERON:0003056!4.89e-07!49;UBERON:0000468!8.75e-07!333
|ontology_enrichment_uberon=UBERON:0000033!1.91e-11!63;UBERON:0001049!4.96e-11!52;UBERON:0005068!4.96e-11!52;UBERON:0006241!4.96e-11!52;UBERON:0007135!4.96e-11!52;UBERON:0001017!8.12e-11!73;UBERON:0005743!8.12e-11!73;UBERON:0004121!1.25e-10!102;UBERON:0000924!1.25e-10!102;UBERON:0006601!1.25e-10!102;UBERON:0000955!1.91e-10!50;UBERON:0006238!1.91e-10!50;UBERON:0000073!3.38e-10!75;UBERON:0001016!3.38e-10!75;UBERON:0002616!7.60e-10!49;UBERON:0002020!2.11e-09!34;UBERON:0002346!9.44e-09!71;UBERON:0003075!9.44e-09!71;UBERON:0007284!9.44e-09!71;UBERON:0005178!7.14e-08!17;UBERON:0005181!7.14e-08!17;UBERON:0002224!7.14e-08!17;UBERON:0000915!7.14e-08!17;UBERON:0008947!7.14e-08!17;UBERON:0003258!7.14e-08!17;UBERON:0002791!2.49e-07!29;UBERON:0003528!2.49e-07!29;UBERON:0001893!2.49e-07!29;UBERON:0002021!3.23e-07!10;UBERON:0000411!3.23e-07!10;UBERON:0001950!3.23e-07!10;UBERON:0003056!4.89e-07!49;UBERON:0000468!8.75e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.02e-16,54;UBERON:0002346,1.94e-15,64;UBERON:0003075,1.94e-15,64;UBERON:0007284,1.94e-15,64;UBERON:0001017,1.02e-14,73;UBERON:0004121,1.34e-14,95;UBERON:0000924,1.34e-14,95;UBERON:0006601,1.34e-14,95;UBERON:0001049,1.91e-14,52;UBERON:0005068,1.91e-14,52;UBERON:0006241,1.91e-14,52;UBERON:0007135,1.91e-14,52;UBERON:0001016,5.34e-14,75;UBERON:0002020,3.78e-13,34;UBERON:0010371,6.05e-13,73;UBERON:0000955,1.77e-11,47;UBERON:0006238,1.77e-11,47;UBERON:0005178,2.45e-11,17;UBERON:0005181,2.45e-11,17;UBERON:0002224,2.45e-11,17;UBERON:0000915,2.45e-11,17;UBERON:0008947,2.45e-11,17;UBERON:0003258,2.45e-11,17;UBERON:0002021,4.20e-11,10;UBERON:0000411,4.20e-11,10;UBERON:0001950,4.20e-11,10;UBERON:0003056,1.28e-10,49;UBERON:0002616,1.32e-10,46;UBERON:0003528,8.41e-10,29;UBERON:0002791,8.41e-10,29;UBERON:0001893,8.41e-10,29;UBERON:0003080,1.65e-08,40;UBERON:0000025,1.95e-08,114;UBERON:0011216,2.50e-08,194;UBERON:0002048,2.70e-08,14;UBERON:0000117,2.70e-08,14;UBERON:0000171,2.70e-08,14;UBERON:0000170,2.70e-08,14;UBERON:0005597,2.70e-08,14;UBERON:0000118,2.70e-08,14;UBERON:0004111,3.43e-08,122;UBERON:0010314,4.73e-08,92;UBERON:0002780,7.63e-08,39;UBERON:0001890,7.63e-08,39;UBERON:0006240,7.63e-08,39;UBERON:0002619,9.13e-08,17;UBERON:0003076,1.08e-07,12;UBERON:0003057,1.08e-07,12;UBERON:0005153,2.03e-07,17;UBERON:0000956,6.54e-07,21;UBERON:0001869,6.54e-07,21;UBERON:0000203,6.54e-07,21
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,2.41654801007919,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,5.09320187881288,10.373894243682,0.103689612308478,0.135005938331691,0,4.28476476605705,2.20868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,4.08599481872601,2.30409799884365,0.791317726381163,2.01272815925301,0,3.62937898701795,4.50210088025344,4.27835093775068,2.06240009831567,2.70506193518296,1.86399445825301,0.075726193333184,0,1.15945795480671,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,7.36069539438128,6.84071636782766,4.54972000513305,0.34255163915718,0,0.742210695324124,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.662524555381181,1.45462575940567,5.59175283654366,12.296793474485,9.42510180660548,0.766371165625774,0,0,0,4.49371918214468,3.66000482254901,1.13088916901578,5.21472960576829,6.13717097592793,4.57133698031032,4.54275536589721,0.203678727700633,0.373220911830279,0,9.04899980311838,0,0,0,0,1.63287597963187,3.97152532883034,8.62055865949505,16.557015727297,0,0,0,0,0,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.877199924551994,0.658650345873152,0.536825675041487,2.3131894342054,0.411618449517138,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0.201683524623343,0.667134131534611,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.864552199498777,1.1948476395262,0,0,0,0,0,0.210407459670956,1.3279672796094,0.738050739898011,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,3.8798169934987,0,0.162964976442026,0.678980343100753,1.17345124144251,4.52266895092903,6.42717830392237,14.4398899414771,3.78324345854858,2.6575762757853,3.6674596791222,2.78567635016755,6.38934432903814,4.77341893318988,0,0,1.47529281905711,0,2.72936002979246,3.04750385139728,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0.395287777946524,14.1381379225595,3.12268187458191,0,0.488660878060728,2.63952196756057,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.645857706783622,0.663442174209714,0.596861720015682,0.820704498725306,1.1659233465194,3.15223013417866,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,1.34864346384821,1.57041565878138,0.26175594198403,8.03612834409116,0.621339313086926,0,0.149516546043979,0,0.583353565032143,0.387479470433193,0.337912250981556,1.05621514781179,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0,0,0.167884616364078,1.54551675225752,0.93841237725591,0.183151624267265,0.857473516316263,0,4.51801474093653,4.60325236507177,4.01026859407578,2.57779773515531,4.11049511862385,3.7769694869485,5.40018000185445,4.5032120322422,5.43770890781046,8.28416498802912,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.21733959710847,0.960377286073039,1.14870937911227,0.476293691283074,1.50649623728312,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.354951612318675,0.715308569841963,0.726732083161643,1.03520318456864,1.26921911837515,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,1.47756723563345,1.63692417267876,1.70430525304563,0.771626443924566,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0.190023419456374,0,0.443461021310609,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,2.41654801007919,0.388859798148567,0.279972843250725,0,0,0,0,0,0.286533439938757,0,0.202316460859598,1.05798195854407,1.26766280701236,0,0,0,0,0,5.09320187881288,10.373894243682,0.103689612308478,0.135005938331691,0,4.28476476605705,2.20868540951614,0.122490799214954,0.0958454710182364,0,3.30347642998166,4.08599481872601,2.30409799884365,0.791317726381163,2.01272815925301,0,3.62937898701795,4.50210088025344,4.27835093775068,2.06240009831567,2.70506193518296,1.86399445825301,0.075726193333184,0,1.15945795480671,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0.845060518660083,0,0,0,7.36069539438128,6.84071636782766,4.54972000513305,0.34255163915718,0,0.742210695324124,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0.144599356919912,0,0,0.662524555381181,1.45462575940567,5.59175283654366,12.296793474485,9.42510180660548,0.766371165625774,0,0,0,4.49371918214468,3.66000482254901,1.13088916901578,5.21472960576829,6.13717097592793,4.57133698031032,4.54275536589721,0.203678727700633,0.373220911830279,0,9.04899980311838,0,0,0,0,1.63287597963187,3.97152532883034,8.62055865949505,16.557015727297,0,0,0,0,0,1.0447564995665,1.4404749548556,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0.492502392237286,0.405344047729279,0.877199924551994,0.658650345873152,0.536825675041487,2.3131894342054,0.411618449517138,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0.201683524623343,0.667134131534611,0.951128130562796,0.474529061544512,0.329397909448022,0.502670417600539,0.397912944082302,0.19496408711912,1.79763881730844,0.864552199498777,1.1948476395262,0,0,0,0,0,0.210407459670956,1.3279672796094,0.738050739898011,0.784993639206874,0.370191491765402,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0.372140947668503,0,0,0,0,3.8798169934987,0,0.162964976442026,0.678980343100753,1.17345124144251,4.52266895092903,6.42717830392237,14.4398899414771,3.78324345854858,2.6575762757853,3.6674596791222,2.78567635016755,6.38934432903814,4.77341893318988,0,0,1.47529281905711,0,2.72936002979246,3.04750385139728,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0.395287777946524,14.1381379225595,3.12268187458191,0,0.488660878060728,2.63952196756057,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.65954501176592,0.645857706783622,0.663442174209714,0.596861720015682,0.820704498725306,1.1659233465194,3.15223013417866,0.341741761595705,0,0,0.376736914009382,0.136694227721025,0.915112692826091,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,1.34864346384821,1.57041565878138,0.26175594198403,8.03612834409116,0.621339313086926,0,0.149516546043979,0,0.583353565032143,0.387479470433193,0.337912250981556,1.05621514781179,0.39061315453185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26730383615211,0,0,0.167884616364078,1.54551675225752,0.93841237725591,0.183151624267265,0.857473516316263,0,4.51801474093653,4.60325236507177,4.01026859407578,2.57779773515531,4.11049511862385,3.7769694869485,5.40018000185445,4.5032120322422,5.43770890781046,8.28416498802912,0,0,0.341467211508268,0.486213434136588,0.209613162627982,0.367687016900028,0.666740183404846,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.565879024158229,1.21733959710847,0.960377286073039,1.14870937911227,0.476293691283074,1.50649623728312,0.77163688185482,0.824171801606613,0.735994600671987,1.02860775715625,0.354951612318675,0.715308569841963,0.726732083161643,1.03520318456864,1.26921911837515,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.593175090620871,1.47756723563345,1.63692417267876,1.70430525304563,0.771626443924566,0.999242311751784,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p1@Pitpnm3
|short_description=p1@Pitpnm3
}}
}}

Latest revision as of 15:25, 25 September 2015

Short description:p1@Pitpnm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Pitpnm3_5end
Coexpression cluster:MCL_coexpression_mm9:238
Association with transcript: -27bp_to_ENSMUST00000075258, ENSMUST00000142471_5end
EntrezGene:Pitpnm3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Pitpnm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I29.43
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.49
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F26.14
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E73.97
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.88
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A64.52
lung, embryo E18.CNhs10583.1287-20I66.43
lung, neonate N00.CNhs11224.640-42C614.44
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C76.39
lung, neonate N30.CNhs11133.1394-42H24.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I18.04
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B71.06
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.28
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.70
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system7.02e-1654
neurectoderm1.94e-1564
neural plate1.94e-1564
presumptive neural plate1.94e-1564
central nervous system1.02e-1473
ectoderm-derived structure1.34e-1495
ectoderm1.34e-1495
presumptive ectoderm1.34e-1495
neural tube1.91e-1452
neural rod1.91e-1452
future spinal cord1.91e-1452
neural keel1.91e-1452
nervous system5.34e-1475
gray matter3.78e-1334
ecto-epithelium6.05e-1373
brain1.77e-1147
future brain1.77e-1147
thoracic cavity element2.45e-1117
thoracic segment organ2.45e-1117
thoracic cavity2.45e-1117
thoracic segment of trunk2.45e-1117
respiratory primordium2.45e-1117
endoderm of foregut2.45e-1117
occipital lobe4.20e-1110
visual cortex4.20e-1110
neocortex4.20e-1110
pre-chordal neural plate1.28e-1049
regional part of brain1.32e-1046
brain grey matter8.41e-1029
regional part of telencephalon8.41e-1029
telencephalon8.41e-1029
anterior neural tube1.65e-0840
tube1.95e-08114
organ system subdivision2.50e-08194
lung2.70e-0814
respiratory tube2.70e-0814
respiration organ2.70e-0814
pair of lungs2.70e-0814
lung primordium2.70e-0814
lung bud2.70e-0814
anatomical conduit3.43e-08122
structure with developmental contribution from neural crest4.73e-0892
regional part of forebrain7.63e-0839
forebrain7.63e-0839
future forebrain7.63e-0839
regional part of cerebral cortex9.13e-0817
posterior neural tube1.08e-0712
chordal neural plate1.08e-0712
epithelial bud2.03e-0717
cerebral cortex6.54e-0721
cerebral hemisphere6.54e-0721
pallium6.54e-0721
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