FFCP PHASE1:Mm9::chr8:56040446..56040470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=234267 | |EntrezGene=234267 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |||
|UniProt=P35802,Q542P2 | |UniProt=P35802,Q542P2 | ||
|association_with_transcript=365bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |association_with_transcript=365bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | ||
|cluster_id=chr8:56040446..56040470,+ | |||
|description=CAGE_peak_4_at_Gpm6a_5end | |description=CAGE_peak_4_at_Gpm6a_5end | ||
|id=chr8:56040446..56040470,+ | |id=chr8:56040446..56040470,+ | ||
Latest revision as of 15:25, 25 September 2015
| Short description: | p4@Gpm6a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Gpm6a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 365bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
| EntrezGene: | Gpm6a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@Gpm6a |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 2.02e-19 | 23 |
| neuroblast (sensu Vertebrata) | 2.02e-19 | 23 |
| neuron | 3.27e-11 | 33 |
| neuronal stem cell | 3.27e-11 | 33 |
| neuroblast | 3.27e-11 | 33 |
| electrically signaling cell | 3.27e-11 | 33 |
| electrically responsive cell | 2.08e-08 | 39 |
| electrically active cell | 2.08e-08 | 39 |
| neural cell | 5.17e-07 | 43 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 1.60e-31 | 54 |
| neurectoderm | 1.49e-29 | 64 |
| neural plate | 1.49e-29 | 64 |
| presumptive neural plate | 1.49e-29 | 64 |
| neural tube | 1.73e-29 | 52 |
| neural rod | 1.73e-29 | 52 |
| future spinal cord | 1.73e-29 | 52 |
| neural keel | 1.73e-29 | 52 |
| gray matter | 2.05e-29 | 34 |
| central nervous system | 2.04e-25 | 73 |
Showing 1 to 10 of 41 entries
