Personal tools

FFCP PHASE1:Mm9::chr8:56040287..56040302,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=234267
|EntrezGene=234267
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=P35802,Q542P2
|UniProt=P35802,Q542P2
|association_with_transcript=206bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end
|association_with_transcript=206bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end
|cluster_id=chr8:56040287..56040302,+
|description=CAGE_peak_7_at_Gpm6a_5end
|description=CAGE_peak_7_at_Gpm6a_5end
|id=chr8:56040287..56040302,+
|id=chr8:56040287..56040302,+
|ontology_enrichment_celltype=CL:0000117!1.32e-19!23;CL:0000337!1.32e-19!23;CL:0000540!5.34e-11!33;CL:0000047!5.34e-11!33;CL:0000031!5.34e-11!33;CL:0000404!5.34e-11!33;CL:0002319!1.38e-10!43;CL:0000221!3.93e-10!44;CL:0000133!3.93e-10!44;CL:0000393!4.36e-08!39;CL:0000211!4.36e-08!39;CL:0000055!7.82e-08!50
|ontology_enrichment_celltype=CL:0000117!1.32e-19!23;CL:0000337!1.32e-19!23;CL:0000540!5.34e-11!33;CL:0000047!5.34e-11!33;CL:0000031!5.34e-11!33;CL:0000404!5.34e-11!33;CL:0002319!1.38e-10!43;CL:0000221!3.93e-10!44;CL:0000133!3.93e-10!44;CL:0000393!4.36e-08!39;CL:0000211!4.36e-08!39;CL:0000055!7.82e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-23,23;CL:0000337,4.68e-23,23;CL:0000540,1.13e-13,33;CL:0000047,1.13e-13,33;CL:0000031,1.13e-13,33;CL:0000404,1.13e-13,33;CL:0000393,1.95e-10,39;CL:0000211,1.95e-10,39;CL:0002319,8.22e-09,43;CL:0000221,1.86e-08,44;CL:0000133,1.86e-08,44;CL:0002609,1.34e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!8.52e-33!52;UBERON:0005068!8.52e-33!52;UBERON:0006241!8.52e-33!52;UBERON:0007135!8.52e-33!52;UBERON:0000073!2.04e-31!75;UBERON:0001016!2.04e-31!75;UBERON:0000955!5.59e-31!50;UBERON:0006238!5.59e-31!50;UBERON:0000033!6.27e-31!63;UBERON:0001017!7.66e-31!73;UBERON:0005743!7.66e-31!73;UBERON:0002616!5.32e-30!49;UBERON:0003056!2.25e-28!49;UBERON:0002346!3.10e-28!71;UBERON:0003075!3.10e-28!71;UBERON:0007284!3.10e-28!71;UBERON:0002020!5.83e-28!34;UBERON:0003080!3.06e-25!40;UBERON:0004121!5.22e-25!102;UBERON:0000924!5.22e-25!102;UBERON:0006601!5.22e-25!102;UBERON:0002780!2.48e-24!39;UBERON:0001890!2.48e-24!39;UBERON:0006240!2.48e-24!39;UBERON:0002791!1.38e-23!29;UBERON:0003528!1.38e-23!29;UBERON:0001893!1.38e-23!29;UBERON:0007811!1.56e-17!86;UBERON:0000956!4.74e-17!21;UBERON:0001869!4.74e-17!21;UBERON:0000203!4.74e-17!21;UBERON:0000153!1.65e-14!94;UBERON:0002619!2.98e-13!17;UBERON:0002021!1.08e-11!10;UBERON:0000411!1.08e-11!10;UBERON:0001950!1.08e-11!10;UBERON:0003076!7.93e-08!12;UBERON:0003057!7.93e-08!12;UBERON:0002420!1.22e-07!8;UBERON:0007245!1.22e-07!8;UBERON:0010009!1.22e-07!8;UBERON:0010011!1.22e-07!8;UBERON:0000454!1.22e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.65e-33,34;UBERON:0000073,1.81e-32,54;UBERON:0001049,1.94e-30,52;UBERON:0005068,1.94e-30,52;UBERON:0006241,1.94e-30,52;UBERON:0007135,1.94e-30,52;UBERON:0003528,4.44e-28,29;UBERON:0002791,4.44e-28,29;UBERON:0001893,4.44e-28,29;UBERON:0001017,3.50e-27,73;UBERON:0001016,5.01e-26,75;UBERON:0000955,1.24e-25,47;UBERON:0006238,1.24e-25,47;UBERON:0002346,1.73e-25,64;UBERON:0003075,1.73e-25,64;UBERON:0007284,1.73e-25,64;UBERON:0002616,1.42e-24,46;UBERON:0003080,7.77e-23,40;UBERON:0002780,7.96e-22,39;UBERON:0001890,7.96e-22,39;UBERON:0006240,7.96e-22,39;UBERON:0010371,1.53e-20,73;UBERON:0000956,2.80e-20,21;UBERON:0001869,2.80e-20,21;UBERON:0000203,2.80e-20,21;UBERON:0003056,5.74e-20,49;UBERON:0004121,8.34e-20,95;UBERON:0000924,8.34e-20,95;UBERON:0006601,8.34e-20,95;UBERON:0002619,9.61e-16,17;UBERON:0002021,1.26e-13,10;UBERON:0000411,1.26e-13,10;UBERON:0001950,1.26e-13,10;UBERON:0010314,2.10e-13,92;UBERON:0002420,8.40e-09,8;UBERON:0007245,8.40e-09,8;UBERON:0010009,8.40e-09,8;UBERON:0010011,8.40e-09,8;UBERON:0000454,8.40e-09,8;UBERON:0003076,6.10e-08,12;UBERON:0003057,6.10e-08,12;UBERON:0002240,5.82e-07,6;UBERON:0005174,5.82e-07,6;UBERON:0001137,5.82e-07,6;UBERON:0000025,7.43e-07,114
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,10.7227724255587,17.4567023159771,11.4089652631112,0,0,0,0,0,0.898800331555214,0.384218305321555,22.7080250955566,23.8960510847092,24.6080204781117,11.9973413449598,14.5773237028065,18.8635830791029,13.3225204715349,13.7882817991503,11.0115880999389,11.6195477657521,11.2132769277058,15.1669230889723,16.2848005612289,21.3574481928272,7.2587579740359,8.4414391504752,9.93188610549266,17.6777151284201,23.6336990126511,13.2343606535963,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,10.6817820474862,0,0,0,0,18.2744580073884,21.0450277296568,22.3664746760899,51.2781744567216,49.3530832647538,15.3763152974074,23.2005006186893,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.95251098811859,1.5373646434182,1.12442069471675,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.9550902271842,18.0083071663748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,7.97039468826982,0,0,0,0,0,0,0,0,0,0,0,21.8498495166829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.5939803271333,90.2237463554067,86.5072225293489,63.4138242848207,56.1767666211927,59.6761178937863,41.851395014372,51.7869383707854,55.283373896073,37.278742446131,0.207574695168353,0.399024873401031,2.56100408631201,1.94485373654635,1.67690530102386,1.65459157605013,3.11145418922261,4.32673620201678,3.20919209591815,3.53776096469316,5.0695859978048,4.14977951049368,4.02658482120494,3.52138338226781,3.27382173046996,4.28664322154766,3.01299247456624,4.05109362973781,2.47251540481984,4.26876868389752,3.77156177623957,4.43689515398344,2.62279808942053,3.63366041580821,3.3879376949519,3.21535509988371,2.0122077016005,3.15683653725411,2.44447404922551,4.48913817326191,2.60997039873183,1.97008964751127,2.04615521584845,1.70430525304563,2.50778594275484,7.24450676020043,3.04111090979031,2.14871054048298,0.956441660344217,0,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.95303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.279972843250725,0,0,0,0,0,0,0,10.7227724255587,17.4567023159771,11.4089652631112,0,0,0,0,0,0.898800331555214,0.384218305321555,22.7080250955566,23.8960510847092,24.6080204781117,11.9973413449598,14.5773237028065,18.8635830791029,13.3225204715349,13.7882817991503,11.0115880999389,11.6195477657521,11.2132769277058,15.1669230889723,16.2848005612289,21.3574481928272,7.2587579740359,8.4414391504752,9.93188610549266,17.6777151284201,23.6336990126511,13.2343606535963,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2473278954042,10.6817820474862,0,0,0,0,18.2744580073884,21.0450277296568,22.3664746760899,51.2781744567216,49.3530832647538,15.3763152974074,23.2005006186893,0.101839363850316,0,0,0.210441855886474,0.260240885925407,0.459804208866946,0.180062129805349,0.452114453507145,0.95251098811859,1.5373646434182,1.12442069471675,3.10444044886819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.9550902271842,18.0083071663748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,7.97039468826982,0,0,0,0,0,0,0,0,0,0,0,21.8498495166829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.5939803271333,90.2237463554067,86.5072225293489,63.4138242848207,56.1767666211927,59.6761178937863,41.851395014372,51.7869383707854,55.283373896073,37.278742446131,0.207574695168353,0.399024873401031,2.56100408631201,1.94485373654635,1.67690530102386,1.65459157605013,3.11145418922261,4.32673620201678,3.20919209591815,3.53776096469316,5.0695859978048,4.14977951049368,4.02658482120494,3.52138338226781,3.27382173046996,4.28664322154766,3.01299247456624,4.05109362973781,2.47251540481984,4.26876868389752,3.77156177623957,4.43689515398344,2.62279808942053,3.63366041580821,3.3879376949519,3.21535509988371,2.0122077016005,3.15683653725411,2.44447404922551,4.48913817326191,2.60997039873183,1.97008964751127,2.04615521584845,1.70430525304563,2.50778594275484,7.24450676020043,3.04111090979031,2.14871054048298,0.956441660344217,0,0.463735671240843
|short_description=p7@Gpm6a
|short_description=p7@Gpm6a
}}
}}

Latest revision as of 15:24, 25 September 2015

Short description:p7@Gpm6a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Gpm6a_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 206bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end
EntrezGene:Gpm6a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
20
40
60
80
100




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:56040287..56040302,%2B&oldid=4199062"