FFCP PHASE1:Mm9::chr16:49855232..49855243,+: Difference between revisions
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{{FFCP|EntrezGene=16423|HGNC=|MCL_coexpression_id=657|UniProt=Q61735|association_with_transcript=-487bp_to_ENSMUST00000084838_5end|description=CAGE_peak_7_at_Cd47_5end|id=chr16:49855232..49855243,+|ontology_enrichment_celltype=CL:0000988!5.77e-10!32;CL:0002032!5.77e-10!32;CL:0000037!5.77e-10!32;CL:0000566!5.77e-10!32;CL:0000837!5.77e-10!32;CL:0000049!1.25e-08!19|ontology_enrichment_celltype_v019_2=CL:0000049,6.94e-16,19;CL:0000557,1.25e-14,7;CL:0000988,3.63e-13,32;CL:0002032,3.63e-13,32;CL:0000037,3.63e-13,32;CL:0000837,3.63e-13,32;CL:0000034,8.56e-09,97;CL:0002476,1.13e-08,2;CL:0000763,1.17e-08,16;CL:0002320,1.39e-08,46;CL:0000134,1.39e-08,46;CL:0000355,2.50e-07,9;CL:0000723,3.82e-07,91;CL:0000048,3.82e-07,91;CL:0000219,4.94e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-13,3;DOID:4045,3.45e-13,3;DOID:0050686,8.38e-07,6|ontology_enrichment_uberon=UBERON:0002204!4.55e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.04e-11,32;UBERON:0002371,1.17e-08,16;UBERON:0002384,1.39e-08,46;UBERON:0001134,2.50e-07,9;UBERON:0002036,2.50e-07,9;UBERON:0002385,2.50e-07,9;UBERON:0000486,2.50e-07,9;UBERON:0007503,2.50e-07,9;UBERON:0001015,2.50e-07,9;UBERON:0002329,2.50e-07,9;UBERON:0003082,2.50e-07,9;UBERON:0003059,2.50e-07,9;UBERON:0007282,2.50e-07,9;UBERON:0004290,2.50e-07,9;UBERON:0009618,2.50e-07,9|phase1_expression=0,0.697950815278722,0,0,0,0.503637815735669,0,0.129123323441576,0.281577444303333,0,0,0.319088635981346,0.171200729931206,0,0.333109761815663,0.607425802169478,2.09868563438444,0.157731082679119,0,0,0,0.992909512008853,1.30599894569468,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,7.53356935326434,7.813353445238,7.32933241563318,5.29408339227913,5.46436387966757,3.88408282424923,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,1.34437519656986,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,2.51611761462433,5.39912457894067,6.22644112658017,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2354109970118,11.5806558201622,10.5140494776369,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.578596234326046,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.915112692826091,2.54967644990783,0.979660166265606,2.07299960706636,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0|short_description=p7@Cd47}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16423 | |||
|HGNC= | |||
|MCL_coexpression_id=657 | |||
|TSSclassifier=NA | |||
|UniProt=Q61735 | |||
|association_with_transcript=-487bp_to_ENSMUST00000084838_5end | |||
|cluster_id=chr16:49855232..49855243,+ | |||
|description=CAGE_peak_7_at_Cd47_5end | |||
|id=chr16:49855232..49855243,+ | |||
|ontology_enrichment_celltype=CL:0000988!5.77e-10!32;CL:0002032!5.77e-10!32;CL:0000037!5.77e-10!32;CL:0000566!5.77e-10!32;CL:0000837!5.77e-10!32;CL:0000049!1.25e-08!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.94e-16,19;CL:0000557,1.25e-14,7;CL:0000988,3.63e-13,32;CL:0002032,3.63e-13,32;CL:0000037,3.63e-13,32;CL:0000837,3.63e-13,32;CL:0000034,8.56e-09,97;CL:0002476,1.13e-08,2;CL:0000763,1.17e-08,16;CL:0002320,1.39e-08,46;CL:0000134,1.39e-08,46;CL:0000355,2.50e-07,9;CL:0000723,3.82e-07,91;CL:0000048,3.82e-07,91;CL:0000219,4.94e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.45e-13,3;DOID:4045,3.45e-13,3;DOID:0050686,8.38e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.55e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,5.04e-11,32;UBERON:0002371,1.17e-08,16;UBERON:0002384,1.39e-08,46;UBERON:0001134,2.50e-07,9;UBERON:0002036,2.50e-07,9;UBERON:0002385,2.50e-07,9;UBERON:0000486,2.50e-07,9;UBERON:0007503,2.50e-07,9;UBERON:0001015,2.50e-07,9;UBERON:0002329,2.50e-07,9;UBERON:0003082,2.50e-07,9;UBERON:0003059,2.50e-07,9;UBERON:0007282,2.50e-07,9;UBERON:0004290,2.50e-07,9;UBERON:0009618,2.50e-07,9 | |||
|phase1_expression=0,0.697950815278722,0,0,0,0.503637815735669,0,0.129123323441576,0.281577444303333,0,0,0.319088635981346,0.171200729931206,0,0.333109761815663,0.607425802169478,2.09868563438444,0.157731082679119,0,0,0,0.992909512008853,1.30599894569468,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,0,0,0.252030129759931,0.221730510655305,0.635030673459631,0.61506478758457,0,0,0,0,7.53356935326434,7.813353445238,7.32933241563318,5.29408339227913,5.46436387966757,3.88408282424923,0,0.202753862439029,0.183546752161682,0,0,0,0,0,0,0.167782606057736,0,1.34437519656986,0.257259436035947,0.573066879877513,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274462930807229,0.52091337055676,0.279182999001381,0,0,0,0,0.186399445825301,0.075726193333184,0.151143120213571,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.506719730950197,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0.247194967734374,0.144599356919912,0.884610551949874,0,0.441683036920787,0,0,0,0,0.255457055208591,2.51611761462433,5.39912457894067,6.22644112658017,0,0,0,0,0,0,0,0,0.622034853050465,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2354109970118,11.5806558201622,10.5140494776369,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.578596234326046,3.01582567878545,2.17562273527484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,0.136694227721025,0.915112692826091,2.54967644990783,0.979660166265606,2.07299960706636,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.187283014939765,0.0640251524048693,0,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.354951612318675,0,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0 | |||
|short_description=p7@Cd47 | |||
}} |
Latest revision as of 15:17, 25 September 2015
Short description: | p7@Cd47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Cd47_5end |
Coexpression cluster: | MCL_coexpression_mm9:657 |
Association with transcript: | -487bp_to_ENSMUST00000084838_5end |
EntrezGene: | Cd47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.94e-16 | 19 |
granulocyte monocyte progenitor cell | 1.25e-14 | 7 |
hematopoietic cell | 3.63e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.63e-13 | 32 |
hematopoietic stem cell | 3.63e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.63e-13 | 32 |
stem cell | 8.56e-09 | 97 |
bone marrow macrophage | 1.13e-08 | 2 |
myeloid cell | 1.17e-08 | 16 |
connective tissue cell | 1.39e-08 | 46 |
mesenchymal cell | 1.39e-08 | 46 |
multi-potent skeletal muscle stem cell | 2.50e-07 | 9 |
somatic stem cell | 3.82e-07 | 91 |
multi fate stem cell | 3.82e-07 | 91 |
motile cell | 4.94e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 5.04e-11 | 32 |
bone marrow | 1.17e-08 | 16 |
connective tissue | 1.39e-08 | 46 |
skeletal muscle tissue | 2.50e-07 | 9 |
striated muscle tissue | 2.50e-07 | 9 |
muscle tissue | 2.50e-07 | 9 |
multilaminar epithelium | 2.50e-07 | 9 |
epithelial vesicle | 2.50e-07 | 9 |
musculature | 2.50e-07 | 9 |
somite | 2.50e-07 | 9 |
myotome | 2.50e-07 | 9 |
presomitic mesoderm | 2.50e-07 | 9 |
presumptive segmental plate | 2.50e-07 | 9 |
dermomyotome | 2.50e-07 | 9 |
trunk paraxial mesoderm | 2.50e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.45e-13 | 3 |
muscle cancer | 3.45e-13 | 3 |
organ system cancer | 8.38e-07 | 6 |