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FFCP PHASE1:Mm9::chr5:138404315..138404337,-: Difference between revisions

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{{FFCP|EntrezGene=118446|HGNC=|MCL_coexpression_id=786|UniProt=Q921C1|association_with_transcript=-128bp_to_ENSMUST00000077119,NM_080450,uc009aeg.1_5end|description=CAGE_peak_1_at_Gjc3_5end|id=chr5:138404315..138404337,-|ontology_enrichment_celltype=CL:0000107!5.76e-08!9|ontology_enrichment_celltype_v019_2=CL:0000221,1.19e-14,44;CL:0000133,1.19e-14,44;CL:0002319,1.06e-13,43;CL:0000540,1.27e-13,33;CL:0000047,1.27e-13,33;CL:0000031,1.27e-13,33;CL:0000404,1.27e-13,33;CL:0000107,1.32e-13,9;CL:0000393,1.26e-10,39;CL:0000211,1.26e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.83e-19!102;UBERON:0000924!1.83e-19!102;UBERON:0006601!1.83e-19!102;UBERON:0000073!1.18e-13!75;UBERON:0001016!1.18e-13!75;UBERON:0001017!1.17e-12!73;UBERON:0005743!1.17e-12!73;UBERON:0002346!1.64e-10!71;UBERON:0003075!1.64e-10!71;UBERON:0007284!1.64e-10!71;UBERON:0000033!2.65e-09!63;UBERON:0000010!5.07e-09!11;UBERON:0002410!5.76e-08!9;UBERON:0002021!2.89e-07!10;UBERON:0000411!2.89e-07!10;UBERON:0001950!2.89e-07!10;UBERON:0000955!9.78e-07!50;UBERON:0006238!9.78e-07!50|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.83e-35,95;UBERON:0000924,6.83e-35,95;UBERON:0006601,6.83e-35,95;UBERON:0001016,1.77e-32,75;UBERON:0001017,2.30e-30,73;UBERON:0010371,7.62e-22,73;UBERON:0000073,1.19e-17,54;UBERON:0002346,4.02e-17,64;UBERON:0003075,4.02e-17,64;UBERON:0007284,4.02e-17,64;UBERON:0001049,1.34e-15,52;UBERON:0005068,1.34e-15,52;UBERON:0006241,1.34e-15,52;UBERON:0007135,1.34e-15,52;UBERON:0000010,1.38e-15,11;UBERON:0002410,1.32e-13,9;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0010314,2.61e-12,92;UBERON:0002021,2.71e-12,10;UBERON:0000411,2.71e-12,10;UBERON:0001950,2.71e-12,10;UBERON:0002020,8.27e-12,34;UBERON:0002616,9.43e-12,46;UBERON:0003528,4.35e-09,29;UBERON:0002791,4.35e-09,29;UBERON:0001893,4.35e-09,29;UBERON:0003076,7.92e-09,12;UBERON:0003057,7.92e-09,12;UBERON:0003080,8.61e-09,40;UBERON:0002780,6.47e-08,39;UBERON:0001890,6.47e-08,39;UBERON:0006240,6.47e-08,39;UBERON:0003056,6.61e-08,49;UBERON:0002619,7.59e-08,17;UBERON:0011216,9.32e-08,194;UBERON:0000956,3.51e-07,21;UBERON:0001869,3.51e-07,21;UBERON:0000203,3.51e-07,21;UBERON:0002950,9.47e-07,4;UBERON:0001891,9.47e-07,4;UBERON:0009616,9.47e-07,4;UBERON:0010286,9.47e-07,4|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78294373027274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,2.30530983192933,0,0,0,6.28432165688368,7.73039893330647,0,0,0,37.4393995397922,40.0938241587489,29.1852413186863,0,0,0,26.8015679041326,11.8180148106653,31.4764390420229,3.53554302568401,3.70166370077668,0,5.07365495332333,8.76630097238712,0,0,0,0,0,0,0.702222100658759,0,0,0,16.0561498545416,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,1.88141931417128,0.376999773989026,0,0.433798070759735,0,1.13236794963186,0.441683036920787,0,1.86391761218122,26.0574909340277,27.6469652993761,0,0,0,0,47.0342607731143,54.9000723382352,0.125654352112864,22.4233373048037,17.6443665557928,61.7130492341893,60.6782323873414,0.407357455401265,0.124406970610093,0,2.10441855886474,0,0,0.360124259610698,0.30140963567143,0.816437989815934,0.512454881139399,0.937017245597288,5.17406741478031,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,29.0200129018496,0.102904612379284,0,0,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,0,0.164698954724011,0.754005626400808,0.596869416123452,0.779856348476481,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0.315270288212382,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,75.1376761142866,115.101876233544,0,0.757412781613119,20.8235424814729,18.7410597262386,47.6085708989486,47.5547907925579,42.1089494015725,39.6307143104365,36.8377738524154,27.179794785752,24.903130010631,9.63963949265421,0,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0.441056796109924,1.31909002353184,2.74489525383039,1.38719727334758,1.55184047204077,1.80554989719567,1.1659233465194,82.5142593946768,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.209088296014469,0.87345025498471,0.944050424693745,1.65306911450672,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0,0,1.13365191807606,0,0,0,0.579568782096571,0,0,0,0.501572104035363,10.7302850097243,6.90487854760765,10.3121192419091,5.32744865265431,13.0165678756422,12.8416962556249,11.4753825039407,9.00642406448441,7.70342095273148,7.24864436452548,0.103787347584177,0,0,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0,0,0.883193520806384,0.342869252385415,1.06485483695602,0.715308569841963,0.581385666529314,0.658765662907314,0.25384382367503,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,1.91288332068843,1.98532277207564,3.2461496986859|short_description=p1@Gjc3}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=118446
|HGNC=
|MCL_coexpression_id=786
|TSSclassifier=NA
|UniProt=Q921C1
|association_with_transcript=-128bp_to_ENSMUST00000077119,NM_080450,uc009aeg.1_5end
|cluster_id=chr5:138404315..138404337,-
|description=CAGE_peak_1_at_Gjc3_5end
|id=chr5:138404315..138404337,-
|ontology_enrichment_celltype=CL:0000107!5.76e-08!9
|ontology_enrichment_celltype_v019_2=CL:0000221,1.19e-14,44;CL:0000133,1.19e-14,44;CL:0002319,1.06e-13,43;CL:0000540,1.27e-13,33;CL:0000047,1.27e-13,33;CL:0000031,1.27e-13,33;CL:0000404,1.27e-13,33;CL:0000107,1.32e-13,9;CL:0000393,1.26e-10,39;CL:0000211,1.26e-10,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.83e-19!102;UBERON:0000924!1.83e-19!102;UBERON:0006601!1.83e-19!102;UBERON:0000073!1.18e-13!75;UBERON:0001016!1.18e-13!75;UBERON:0001017!1.17e-12!73;UBERON:0005743!1.17e-12!73;UBERON:0002346!1.64e-10!71;UBERON:0003075!1.64e-10!71;UBERON:0007284!1.64e-10!71;UBERON:0000033!2.65e-09!63;UBERON:0000010!5.07e-09!11;UBERON:0002410!5.76e-08!9;UBERON:0002021!2.89e-07!10;UBERON:0000411!2.89e-07!10;UBERON:0001950!2.89e-07!10;UBERON:0000955!9.78e-07!50;UBERON:0006238!9.78e-07!50
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.83e-35,95;UBERON:0000924,6.83e-35,95;UBERON:0006601,6.83e-35,95;UBERON:0001016,1.77e-32,75;UBERON:0001017,2.30e-30,73;UBERON:0010371,7.62e-22,73;UBERON:0000073,1.19e-17,54;UBERON:0002346,4.02e-17,64;UBERON:0003075,4.02e-17,64;UBERON:0007284,4.02e-17,64;UBERON:0001049,1.34e-15,52;UBERON:0005068,1.34e-15,52;UBERON:0006241,1.34e-15,52;UBERON:0007135,1.34e-15,52;UBERON:0000010,1.38e-15,11;UBERON:0002410,1.32e-13,9;UBERON:0000955,1.38e-12,47;UBERON:0006238,1.38e-12,47;UBERON:0010314,2.61e-12,92;UBERON:0002021,2.71e-12,10;UBERON:0000411,2.71e-12,10;UBERON:0001950,2.71e-12,10;UBERON:0002020,8.27e-12,34;UBERON:0002616,9.43e-12,46;UBERON:0003528,4.35e-09,29;UBERON:0002791,4.35e-09,29;UBERON:0001893,4.35e-09,29;UBERON:0003076,7.92e-09,12;UBERON:0003057,7.92e-09,12;UBERON:0003080,8.61e-09,40;UBERON:0002780,6.47e-08,39;UBERON:0001890,6.47e-08,39;UBERON:0006240,6.47e-08,39;UBERON:0003056,6.61e-08,49;UBERON:0002619,7.59e-08,17;UBERON:0011216,9.32e-08,194;UBERON:0000956,3.51e-07,21;UBERON:0001869,3.51e-07,21;UBERON:0000203,3.51e-07,21;UBERON:0002950,9.47e-07,4;UBERON:0001891,9.47e-07,4;UBERON:0009616,9.47e-07,4;UBERON:0010286,9.47e-07,4
|phase1_expression=4.48416771893423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78294373027274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79760066311043,2.30530983192933,0,0,0,6.28432165688368,7.73039893330647,0,0,0,37.4393995397922,40.0938241587489,29.1852413186863,0,0,0,26.8015679041326,11.8180148106653,31.4764390420229,3.53554302568401,3.70166370077668,0,5.07365495332333,8.76630097238712,0,0,0,0,0,0,0.702222100658759,0,0,0,16.0561498545416,0,0,0,0,0,0,1.48439043634778,0,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.452167921657868,1.88141931417128,0.376999773989026,0,0.433798070759735,0,1.13236794963186,0.441683036920787,0,1.86391761218122,26.0574909340277,27.6469652993761,0,0,0,0,47.0342607731143,54.9000723382352,0.125654352112864,22.4233373048037,17.6443665557928,61.7130492341893,60.6782323873414,0.407357455401265,0.124406970610093,0,2.10441855886474,0,0,0.360124259610698,0.30140963567143,0.816437989815934,0.512454881139399,0.937017245597288,5.17406741478031,0,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0.823128545631774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.324275238183423,0.146199987425332,0.439100230582101,0.402619256281115,29.0200129018496,0.102904612379284,0,0,0,0,0.257734922644187,0.80673409849337,0.667134131534611,0.190225626112559,0,0.164698954724011,0.754005626400808,0.596869416123452,0.779856348476481,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0.315270288212382,0,0,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,75.1376761142866,115.101876233544,0,0.757412781613119,20.8235424814729,18.7410597262386,47.6085708989486,47.5547907925579,42.1089494015725,39.6307143104365,36.8377738524154,27.179794785752,24.903130010631,9.63963949265421,0,0.178065603667255,0.162886959353576,0.659880491890142,0,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,1.55056975900933,0,0.356497378384721,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0.304464949114599,0,0,0.441056796109924,1.31909002353184,2.74489525383039,1.38719727334758,1.55184047204077,1.80554989719567,1.1659233465194,82.5142593946768,0,0,0,0,0,0.228778173206523,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.209088296014469,0.87345025498471,0.944050424693745,1.65306911450672,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0.100966449948148,0.0762068066549998,0,0,0,0,1.13365191807606,0,0,0,0.579568782096571,0,0,0,0.501572104035363,10.7302850097243,6.90487854760765,10.3121192419091,5.32744865265431,13.0165678756422,12.8416962556249,11.4753825039407,9.00642406448441,7.70342095273148,7.24864436452548,0.103787347584177,0,0,0.486213434136588,0.628839487883947,0.367687016900028,0.44449345560323,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.768301828858431,0.631790158511746,0.476293691283074,0.463537303779422,0,0,0.883193520806384,0.342869252385415,1.06485483695602,0.715308569841963,0.581385666529314,0.658765662907314,0.25384382367503,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,1.91288332068843,1.98532277207564,3.2461496986859
|short_description=p1@Gjc3
}}

Latest revision as of 15:13, 25 September 2015

Short description:p1@Gjc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gjc3_5end
Coexpression cluster:MCL_coexpression_mm9:786
Association with transcript: -128bp_to_ENSMUST00000077119, NM_080450, uc009aeg.1_5end
EntrezGene:Gjc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gjc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.80
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.48
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D95.07
Mouse Schwann, donor2.CNhs12573.11746-123F98.77
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.13
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B226.06
cerebellum, neonate N30.CNhs11135.1395-42I227.65
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A447.03
corpus striatum, adult.CNhs10487.19-21D854.90
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D522.42
cortex, neonate N30.CNhs11107.1392-42F217.64
diencephalon, adult.CNhs10482.20-12F261.71
diencephalon, neonate N30.CNhs11201.1388-42B260.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E829.02
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C275.14
medulla oblongata, neonate N30.CNhs11200.1396-42A3115.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.82
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.74
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E347.61
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D747.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.63
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D436.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D624.90
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C982.51
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.33
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A611.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell1.19e-1444
neurectodermal cell1.19e-1444
neural cell1.06e-1343
neuron1.27e-1333
neuronal stem cell1.27e-1333
neuroblast1.27e-1333
electrically signaling cell1.27e-1333
autonomic neuron1.32e-139
electrically responsive cell1.26e-1039
electrically active cell1.26e-1039

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure6.83e-3595
ectoderm6.83e-3595
presumptive ectoderm6.83e-3595
nervous system1.77e-3275
central nervous system2.30e-3073
ecto-epithelium7.62e-2273
regional part of nervous system1.19e-1754
neurectoderm4.02e-1764
neural plate4.02e-1764
presumptive neural plate4.02e-1764
neural tube1.34e-1552
neural rod1.34e-1552
future spinal cord1.34e-1552
neural keel1.34e-1552
peripheral nervous system1.38e-1511
autonomic nervous system1.32e-139
brain1.38e-1247
future brain1.38e-1247
structure with developmental contribution from neural crest2.61e-1292
occipital lobe2.71e-1210
visual cortex2.71e-1210
neocortex2.71e-1210
gray matter8.27e-1234
regional part of brain9.43e-1246
brain grey matter4.35e-0929
regional part of telencephalon4.35e-0929
telencephalon4.35e-0929
posterior neural tube7.92e-0912
chordal neural plate7.92e-0912
anterior neural tube8.61e-0940
regional part of forebrain6.47e-0839
forebrain6.47e-0839
future forebrain6.47e-0839
pre-chordal neural plate6.61e-0849
regional part of cerebral cortex7.59e-0817
organ system subdivision9.32e-08194
cerebral cortex3.51e-0721
cerebral hemisphere3.51e-0721
pallium3.51e-0721
regional part of midbrain9.47e-074
midbrain9.47e-074
presumptive midbrain9.47e-074
midbrain neural tube9.47e-074
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