FFCP PHASE1:Mm9::chr10:115254412..115254425,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216350 | |EntrezGene=216350 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=410 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R3G9 | |UniProt=Q8R3G9 | ||
|association_with_transcript=72bp_to_ENSMUST00000035563,ENSMUST00000080630,NM_001168680,NM_146010,uc007hbm.2,uc007hbo.2_5end | |association_with_transcript=72bp_to_ENSMUST00000035563,ENSMUST00000080630,NM_001168680,NM_146010,uc007hbm.2,uc007hbo.2_5end | ||
|cluster_id=chr10:115254412..115254425,+ | |||
|description=CAGE_peak_6_at_Tspan8_5end | |description=CAGE_peak_6_at_Tspan8_5end | ||
|id=chr10:115254412..115254425,+ | |id=chr10:115254412..115254425,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.36e-11!9;CL:0002251!5.36e-11!9;CL:0000066!1.40e-09!25;CL:0002076!1.17e-08!15;CL:0000075!1.56e-08!7;CL:0000239!6.53e-08!6;CL:0000677!6.53e-08!6;CL:0000212!6.53e-08!6;CL:0000584!6.53e-08!6;CL:0000223!7.79e-07!20 | |ontology_enrichment_celltype=CL:0002563!5.36e-11!9;CL:0002251!5.36e-11!9;CL:0000066!1.40e-09!25;CL:0002076!1.17e-08!15;CL:0000075!1.56e-08!7;CL:0000239!6.53e-08!6;CL:0000677!6.53e-08!6;CL:0000212!6.53e-08!6;CL:0000584!6.53e-08!6;CL:0000223!7.79e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.59e-21,9;CL:0002251,2.59e-21,9;CL:0002076,3.31e-19,15;CL:0000066,5.50e-19,25;CL:0000223,5.93e-14,20;CL:0000239,2.53e-13,6;CL:0000677,2.53e-13,6;CL:0000584,2.53e-13,6;CL:0000075,2.22e-11,7;CL:0000682,1.20e-10,3;CL:0002250,1.10e-09,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.68e-18!15;UBERON:0004923!6.40e-16!24;UBERON:0005409!9.65e-16!59;UBERON:0001242!1.93e-15!13;UBERON:0000060!1.93e-15!13;UBERON:0001262!1.93e-15!13;UBERON:0004786!1.93e-15!13;UBERON:0000160!4.82e-12!43;UBERON:0004119!2.16e-11!130;UBERON:0000925!2.16e-11!130;UBERON:0006595!2.16e-11!130;UBERON:0001007!3.53e-11!128;UBERON:0001555!3.53e-11!128;UBERON:0007026!3.53e-11!128;UBERON:0003350!5.36e-11!9;UBERON:0004808!5.36e-11!9;UBERON:0001277!5.36e-11!9;UBERON:0000485!2.78e-10!11;UBERON:0004921!6.94e-10!126;UBERON:0004185!6.94e-10!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.86e-34,15;UBERON:0001242,2.61e-28,13;UBERON:0001262,2.61e-28,13;UBERON:0004786,2.61e-28,13;UBERON:0000160,8.47e-23,31;UBERON:0003350,2.59e-21,9;UBERON:0004808,2.59e-21,9;UBERON:0001277,2.59e-21,9;UBERON:0004923,1.57e-20,24;UBERON:0000485,3.22e-17,11;UBERON:0005409,5.88e-16,47;UBERON:0000331,3.14e-11,3;UBERON:0002116,3.14e-11,3;UBERON:0001204,3.14e-11,3;UBERON:0001168,3.14e-11,3;UBERON:0001007,7.91e-09,116;UBERON:0001555,7.91e-09,116;UBERON:0007026,7.91e-09,116;UBERON:0004119,1.33e-08,118;UBERON:0000925,1.33e-08,118;UBERON:0006595,1.33e-08,118;UBERON:0002108,1.64e-08,4;UBERON:0001962,8.64e-08,2;UBERON:0001961,8.64e-08,2;UBERON:0001744,8.64e-08,2;UBERON:0004921,5.90e-07,114;UBERON:0001155,6.53e-07,2;UBERON:0000059,6.53e-07,2 | |||
|phase1_expression=0,2.44282785347553,2.72999543633722,0.90739263392049,2.00358291978539,15.1091344720701,12.1478573109673,0,0,0,0,0,0,0,0,0,1.39912375625629,0,0,0,0.935476191661768,0,0,8.47959840805055,16.5174682368362,6.89078356938024,9.04600191934057,9.69620547086501,15.5819203954227,18.146169342715,35.2551511941934,0,0,0,2.3108129580102,1.66234645358492,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,3.68034769719064,2.02687892380079,0,2.16949371466214,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0.484875253135222,3.72783522436244,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0.660837565967596,1.05780226665418,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.988193728344065,0.251335208800269,0.198956472041151,0.58489226135736,0,1.51296634912286,2.19055400579804,0,0,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0.147610147979602,0,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.318909537314974,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0,0.674321731924103,0.909188012978695,0.785267825952089,6.61036363788144,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,1.83151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.44282785347553,2.72999543633722,0.90739263392049,2.00358291978539,15.1091344720701,12.1478573109673,0,0,0,0,0,0,0,0,0,1.39912375625629,0,0,0,0.935476191661768,0,0,8.47959840805055,16.5174682368362,6.89078356938024,9.04600191934057,9.69620547086501,15.5819203954227,18.146169342715,35.2551511941934,0,0,0,2.3108129580102,1.66234645358492,2.24586291888606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.702222100658759,0,0,0,0.422530259330042,0,0,0,3.68034769719064,2.02687892380079,0,2.16949371466214,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0.484875253135222,3.72783522436244,0,0.209446706813455,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0.102904612379284,0.660837565967596,1.05780226665418,0,0,0,0.403367049246685,0,0.190225626112559,0.474529061544512,0.988193728344065,0.251335208800269,0.198956472041151,0.58489226135736,0,1.51296634912286,2.19055400579804,0,0,0,0,0.193952487167626,0.420814919341911,0.316182685621286,0.147610147979602,0,0.493588655687202,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.630540576424764,0.221464689648775,0.318909537314974,0.81931657357869,0.172684981865896,1.3018415272336,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0.21183207086382,0.441056796109924,0,0,0,0,0,0.582961673259701,0,0.170870880797853,0,0,0,0.27338845544205,0.228778173206523,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0,0.674321731924103,0.909188012978695,0.785267825952089,6.61036363788144,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,1.83151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0.294397840268795,0.342869252385415,0,0,0,0,0.169229215783353,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Tspan8 | |short_description=p6@Tspan8 | ||
}} | }} |
Latest revision as of 15:03, 25 September 2015
Short description: | p6@Tspan8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tspan8_5end |
Coexpression cluster: | MCL_coexpression_mm9:410 |
Association with transcript: | 72bp_to_ENSMUST00000035563, ENSMUST00000080630, NM_001168680, NM_146010, uc007hbm.2, uc007hbo.2_5end |
EntrezGene: | Tspan8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.59e-21 | 9 |
epithelial cell of alimentary canal | 2.59e-21 | 9 |
endo-epithelial cell | 3.31e-19 | 15 |
epithelial cell | 5.50e-19 | 25 |
endodermal cell | 5.93e-14 | 20 |
brush border epithelial cell | 2.53e-13 | 6 |
gut absorptive cell | 2.53e-13 | 6 |
enterocyte | 2.53e-13 | 6 |
columnar/cuboidal epithelial cell | 2.22e-11 | 7 |
M cell of gut | 1.20e-10 | 3 |
intestinal crypt stem cell | 1.10e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.86e-34 | 15 |
intestinal mucosa | 2.61e-28 | 13 |
wall of intestine | 2.61e-28 | 13 |
gastrointestinal system mucosa | 2.61e-28 | 13 |
intestine | 8.47e-23 | 31 |
epithelium of mucosa | 2.59e-21 | 9 |
gastrointestinal system epithelium | 2.59e-21 | 9 |
intestinal epithelium | 2.59e-21 | 9 |
organ component layer | 1.57e-20 | 24 |
simple columnar epithelium | 3.22e-17 | 11 |
gastrointestinal system | 5.88e-16 | 47 |
ileal mucosa | 3.14e-11 | 3 |
ileum | 3.14e-11 | 3 |
mucosa of small intestine | 3.14e-11 | 3 |
wall of small intestine | 3.14e-11 | 3 |
digestive system | 7.91e-09 | 116 |
digestive tract | 7.91e-09 | 116 |
primitive gut | 7.91e-09 | 116 |
endoderm-derived structure | 1.33e-08 | 118 |
endoderm | 1.33e-08 | 118 |
presumptive endoderm | 1.33e-08 | 118 |
small intestine | 1.64e-08 | 4 |
gut-associated lymphoid tissue | 8.64e-08 | 2 |
mucosa-associated lymphoid tissue | 8.64e-08 | 2 |
lymphoid tissue | 8.64e-08 | 2 |
subdivision of digestive tract | 5.90e-07 | 114 |
colon | 6.53e-07 | 2 |
large intestine | 6.53e-07 | 2 |