FFCP PHASE1:Mm9::chr16:4886271..4886284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17237 | |EntrezGene=17237 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9D074 | |UniProt=Q9D074 | ||
|association_with_transcript=0bp_to_ENSMUST00000023159,ENSMUST00000090460_5end | |association_with_transcript=0bp_to_ENSMUST00000023159,ENSMUST00000090460_5end | ||
|cluster_id=chr16:4886271..4886284,+ | |||
|description=CAGE_peak_2_at_Mgrn1_5end | |description=CAGE_peak_2_at_Mgrn1_5end | ||
|id=chr16:4886271..4886284,+ | |id=chr16:4886271..4886284,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!5.90e-14!114;UBERON:0004111!2.19e-13!122;UBERON:0001017!5.70e-09!73;UBERON:0005743!5.70e-09!73;UBERON:0000073!1.66e-08!75;UBERON:0001016!1.66e-08!75;UBERON:0007100!5.30e-08!18;UBERON:0000948!5.30e-08!18;UBERON:0005498!5.30e-08!18;UBERON:0004140!5.30e-08!18;UBERON:0009881!5.30e-08!18;UBERON:0004141!5.30e-08!18;UBERON:0003084!5.30e-08!18;UBERON:0007005!5.30e-08!18;UBERON:0004139!5.30e-08!18;UBERON:0004291!5.30e-08!18;UBERON:0001049!7.79e-08!52;UBERON:0005068!7.79e-08!52;UBERON:0006241!7.79e-08!52;UBERON:0007135!7.79e-08!52;UBERON:0000955!2.96e-07!50;UBERON:0006238!2.96e-07!50;UBERON:0002616!7.79e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,3.31e-14,114;UBERON:0004111,1.25e-13,122;UBERON:0010314,2.34e-10,92;UBERON:0001017,4.85e-09,73;UBERON:0001016,1.42e-08,75;UBERON:0000073,1.92e-08,54;UBERON:0007100,4.44e-08,18;UBERON:0000948,4.44e-08,18;UBERON:0005498,4.44e-08,18;UBERON:0004140,4.44e-08,18;UBERON:0009881,4.44e-08,18;UBERON:0004141,4.44e-08,18;UBERON:0003084,4.44e-08,18;UBERON:0007005,4.44e-08,18;UBERON:0004139,4.44e-08,18;UBERON:0004291,4.44e-08,18;UBERON:0001049,5.04e-08,52;UBERON:0005068,5.04e-08,52;UBERON:0006241,5.04e-08,52;UBERON:0007135,5.04e-08,52;UBERON:0004121,9.01e-08,95;UBERON:0000924,9.01e-08,95;UBERON:0006601,9.01e-08,95 | |||
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| |phase1_expression=2.40223270657191,5.93258192986914,5.0049916332849,4.23449895829562,5.00895729946347,2.01455126294268,1.40167584357315,0.516493293766305,1.97104211012333,0.468129052643987,0.513653904676515,0.717949430958028,0.856003649656029,0.786783621770977,0.666219523631325,1.41732687172878,0.699561878128147,3.47008381894061,5.34746291062381,4.66828616977833,1.9559956734746,0.496454756004426,0.522399578277871,2.3998863419011,1.83527424853736,4.59385571292016,4.73838195774982,2.15471232685889,2.66032787238923,1.26015064879965,0.886922042621219,0.635030673459631,0.61506478758457,0,0.866554859253824,0.664938581433969,0.816677425049476,0,2.3440060335714,0,0,0.683045484958446,2.42755176515577,2.39203954153597,1.72340783073175,0.917733760808408,3.9119567217402,2.18025156380447,2.41654801007919,3.88859798148567,1.81982348112971,1.43752564364972,5.20126078778983,1.45072428402269,2.68875039313971,2.05807548828758,0.573066879877513,3.6097046459421,2.63011399117477,1.5869729378161,0.633831403506179,4.40497891689872,0.889294796111139,3.5995988691256,4.94433181283487,0.7104801149461,5.39280198933128,7.30014780110954,1.14058573539325,2.16009501330705,1.89292465216244,4.85606673486466,2.42955395046775,2.57230678351403,1.43768206527355,0,4.40463523997555,2.55374676170375,2.76491759861238,1.84640802822271,2.74462930807229,0.52091337055676,4.74611098302348,2.25105044012672,2.75036845998258,3.83017161115768,2.84743361598206,3.16879057903011,1.28734528666413,1.51143120213571,1.73918693221007,2.58127163094416,3.39985666853875,1.61910957491345,1.94932925234301,4.48026887097336,2.66844398250329,2.21559419351475,1.03914401841148,1.7666978725517,2.39433813620357,1.28326477414318,0,0,0.432982082022428,1.01343946190039,1.01104889002957,2.62622923353838,3.36619248741323,0.890652834388949,0.693941307064543,2.13125834818499,0.691846491768175,1.3565037649736,2.3517741427141,1.25666591329675,4.94389935468748,1.87979163995885,0,2.26473589926373,0,0,1.86391761218122,2.04946557908083,4.39838084308256,2.55457055208591,0.838705871541442,1.19980546198682,0.381210681219194,3.2953940669061,5.03250663100489,1.63350657746724,4.17178368461463,4.60287823194595,3.32460871295296,3.40706652442291,1.93494791315601,1.24406970610093,1.26361379216837,1.26265113531884,1.56144531555244,2.06911893990126,1.62055916824814,1.80845781402858,1.42876648217788,1.40925092313335,2.06143794031403,1.03481348295606,2.80238390812695,1.51284864134255,2.28736461413134,2.84954452155847,1.11218899690239,1.0447564995665,1.4404749548556,1.59227413454795,0,0.51469581422943,0.852490498186778,4.55676699578104,3.28336483973535,2.16074473753218,3.78791576936336,4.72234156193769,4.31947916084659,6.97601834251224,7.51165523918934,7.23945122676451,7.89887279584706,7.05920095540109,10.0525323836861,6.72519942156529,3.51280184465681,6.84452735677896,5.04695876553905,1.9551876352064,2.64335026387038,1.85115396664481,1.70630600428187,1.16118335930219,1.28867461322093,2.42020229548011,1.33426826306922,0.570676878337677,3.32170343081158,1.31759163779209,3.01602250560323,1.98956472041151,1.75467678407208,2.69645822596266,2.16138049874694,2.58883655230677,1.89667900953082,1.14248512609729,3.38123207019241,1.22190796707189,2.52138233317913,2.66516115583211,2.84564417059158,3.24742325555125,3.45397201251025,3.45512058981041,2.07516838961004,1.16791574001266,1.57247196090562,1.12431056192427,0.608580364165509,1.20588579876208,2.29163266603278,1.72617682470486,6.97181475132652,1.64736847912849,7.18841032636773,3.34926852901653,3.74445207737473,2.52578877947112,1.07638448113147,0,3.14080423283228,1.13694847062291,1.79261474086228,2.54617628662782,1.40814148973101,3.01511263395268,2.61848004974615,3.90267295715598,2.52216230569906,4.65075848262427,2.71073106717728,2.13022309130459,1.20879487306127,2.02508682014116,0,2.71952841909355,0.491764273019036,1.37968373152366,3.37156238974363,3.16471553798949,1.63934945376675,1.51482556322624,0.94652465824877,1.95219372148319,3.66219776145758,3.34556317133573,1.33679204449436,1.13230612315533,2.02405350837447,2.92255857911312,1.97643888973262,4.81981974632711,1.84522110770749,1.95872164033981,2.28041743095006,3.62934270539578,0,0.971122544619926,0,0.565815239267694,0.885905678642318,0,1.80899805217755,1.09060118843252,1.78248689192361,0.316036757935816,3.16255825724996,1.03135543248187,1.70219802876894,1.62054984628179,2.06973894052407,3.85806663056866,3.01478397191865,1.42695054081656,1.97458824722545,2.74018454203139,1.40803024838226,0.847328283455281,2.42581237860458,2.96795255294664,1.77610869365496,1.93001359770099,2.626191568069,2.29797259643086,3.78925087618806,3.70850604021019,1.19609616558497,0.619160603889667,1.48155621895769,1.13021074202815,0.820165366326151,1.14389086603261,2.37969801991397,2.51912614182584,1.79659965945751,2.86401185404534,0.474503990371703,2.03319467126849,1.62008011232702,0.836353184057875,1.52853794622324,1.61837215661785,1.73572257023205,1.04702376793612,0.648074866458964,3.10669656543463,0,1.19613236835183,2.3164188663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| ||
|short_description=p2@Mgrn1 | |short_description=p2@Mgrn1 | ||
}} | }} |
Latest revision as of 15:01, 25 September 2015
Short description: | p2@Mgrn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mgrn1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000023159, ENSMUST00000090460_5end |
EntrezGene: | Mgrn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 3.31e-14 | 114 |
anatomical conduit | 1.25e-13 | 122 |
structure with developmental contribution from neural crest | 2.34e-10 | 92 |
central nervous system | 4.85e-09 | 73 |
nervous system | 1.42e-08 | 75 |
regional part of nervous system | 1.92e-08 | 54 |
primary circulatory organ | 4.44e-08 | 18 |
heart | 4.44e-08 | 18 |
primitive heart tube | 4.44e-08 | 18 |
primary heart field | 4.44e-08 | 18 |
anterior lateral plate mesoderm | 4.44e-08 | 18 |
heart tube | 4.44e-08 | 18 |
heart primordium | 4.44e-08 | 18 |
cardiac mesoderm | 4.44e-08 | 18 |
cardiogenic plate | 4.44e-08 | 18 |
heart rudiment | 4.44e-08 | 18 |
neural tube | 5.04e-08 | 52 |
neural rod | 5.04e-08 | 52 |
future spinal cord | 5.04e-08 | 52 |
neural keel | 5.04e-08 | 52 |
ectoderm-derived structure | 9.01e-08 | 95 |
ectoderm | 9.01e-08 | 95 |
presumptive ectoderm | 9.01e-08 | 95 |