FFCP PHASE1:Mm9::chr7:107855183..107855209,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:107855183..107855209,+ to FFCP PHASE1:Mm9::chr7:107855183..107855209,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=319604 | |EntrezGene=319604 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BGZ2 | |UniProt=Q8BGZ2 | ||
|association_with_transcript=0bp_to_ENSMUST00000084914_5end | |||
|cluster_id=chr7:107855183..107855209,+ | |||
|description=CAGE_peak_3_at_Fam168a_5end | |||
|id=chr7:107855183..107855209,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.61e-14!33;CL:0000047!2.61e-14!33;CL:0000031!2.61e-14!33;CL:0000404!2.61e-14!33;CL:0000393!3.61e-14!39;CL:0000211!3.61e-14!39;CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0002319!2.68e-13!43;CL:0000221!3.23e-13!44;CL:0000133!3.23e-13!44;CL:0000055!6.69e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.61e-14,33;CL:0000047,2.61e-14,33;CL:0000031,2.61e-14,33;CL:0000404,2.61e-14,33;CL:0000393,3.61e-14,39;CL:0000211,3.61e-14,39;CL:0000117,2.53e-13,23;CL:0000337,2.53e-13,23;CL:0002319,2.68e-13,43;CL:0000221,3.23e-13,44;CL:0000133,3.23e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.81e-29!73;UBERON:0005743!3.81e-29!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0004121!3.65e-23!102;UBERON:0000924!3.65e-23!102;UBERON:0006601!3.65e-23!102;UBERON:0001049!6.71e-22!52;UBERON:0005068!6.71e-22!52;UBERON:0006241!6.71e-22!52;UBERON:0007135!6.71e-22!52;UBERON:0000955!1.88e-20!50;UBERON:0006238!1.88e-20!50;UBERON:0002616!6.53e-20!49;UBERON:0000033!1.09e-19!63;UBERON:0002346!1.34e-19!71;UBERON:0003075!1.34e-19!71;UBERON:0007284!1.34e-19!71;UBERON:0002020!2.01e-18!34;UBERON:0003056!1.64e-16!49;UBERON:0003080!6.30e-16!40;UBERON:0002791!1.72e-15!29;UBERON:0003528!1.72e-15!29;UBERON:0001893!1.72e-15!29;UBERON:0002780!2.98e-15!39;UBERON:0001890!2.98e-15!39;UBERON:0006240!2.98e-15!39;UBERON:0000153!4.34e-14!94;UBERON:0000025!1.02e-13!114;UBERON:0004111!3.21e-12!122;UBERON:0007811!1.58e-11!86;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!5.96e-09!17;UBERON:0000468!1.32e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-29,73;UBERON:0001016,1.26e-27,75;UBERON:0004121,9.11e-26,95;UBERON:0000924,9.11e-26,95;UBERON:0006601,9.11e-26,95;UBERON:0000073,5.54e-23,54;UBERON:0002346,7.97e-23,64;UBERON:0003075,7.97e-23,64;UBERON:0007284,7.97e-23,64;UBERON:0001049,6.70e-22,52;UBERON:0005068,6.70e-22,52;UBERON:0006241,6.70e-22,52;UBERON:0007135,6.70e-22,52;UBERON:0010371,1.45e-20,73;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002020,2.01e-18,34;UBERON:0002616,3.84e-18,46;UBERON:0003056,1.64e-16,49;UBERON:0010314,3.55e-16,92;UBERON:0003080,6.30e-16,40;UBERON:0003528,1.72e-15,29;UBERON:0002791,1.72e-15,29;UBERON:0001893,1.72e-15,29;UBERON:0002780,2.98e-15,39;UBERON:0001890,2.98e-15,39;UBERON:0006240,2.98e-15,39;UBERON:0000025,1.02e-13,114;UBERON:0004111,3.21e-12,122;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002619,5.96e-09,17 | |||
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| ||
|short_description=p3@Fam168a | |||
}} | }} |
Latest revision as of 14:58, 25 September 2015
Short description: | p3@Fam168a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam168a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000084914_5end |
EntrezGene: | Fam168a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.61e-14 | 33 |
neuronal stem cell | 2.61e-14 | 33 |
neuroblast | 2.61e-14 | 33 |
electrically signaling cell | 2.61e-14 | 33 |
electrically responsive cell | 3.61e-14 | 39 |
electrically active cell | 3.61e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.53e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-13 | 23 |
neural cell | 2.68e-13 | 43 |
ectodermal cell | 3.23e-13 | 44 |
neurectodermal cell | 3.23e-13 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.81e-29 | 73 |
nervous system | 1.26e-27 | 75 |
ectoderm-derived structure | 9.11e-26 | 95 |
ectoderm | 9.11e-26 | 95 |
presumptive ectoderm | 9.11e-26 | 95 |
regional part of nervous system | 5.54e-23 | 54 |
neurectoderm | 7.97e-23 | 64 |
neural plate | 7.97e-23 | 64 |
presumptive neural plate | 7.97e-23 | 64 |
neural tube | 6.70e-22 | 52 |
neural rod | 6.70e-22 | 52 |
future spinal cord | 6.70e-22 | 52 |
neural keel | 6.70e-22 | 52 |
ecto-epithelium | 1.45e-20 | 73 |
brain | 1.13e-18 | 47 |
future brain | 1.13e-18 | 47 |
gray matter | 2.01e-18 | 34 |
regional part of brain | 3.84e-18 | 46 |
pre-chordal neural plate | 1.64e-16 | 49 |
structure with developmental contribution from neural crest | 3.55e-16 | 92 |
anterior neural tube | 6.30e-16 | 40 |
brain grey matter | 1.72e-15 | 29 |
regional part of telencephalon | 1.72e-15 | 29 |
telencephalon | 1.72e-15 | 29 |
regional part of forebrain | 2.98e-15 | 39 |
forebrain | 2.98e-15 | 39 |
future forebrain | 2.98e-15 | 39 |
tube | 1.02e-13 | 114 |
anatomical conduit | 3.21e-12 | 122 |
cerebral cortex | 2.14e-11 | 21 |
cerebral hemisphere | 2.14e-11 | 21 |
pallium | 2.14e-11 | 21 |
regional part of cerebral cortex | 5.96e-09 | 17 |