Personal tools

FFCP PHASE1:Mm9::chr5:137791329..137791345,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13846
|EntrezGene=13846
|HGNC=
|HGNC=
|MCL_coexpression_id=1813
|TSSclassifier=NA
|UniProt=P54761,Q8C7S3,Q8C8K1,Q3V1K8
|UniProt=P54761,Q8C7S3,Q8C8K1,Q3V1K8
|association_with_transcript=0bp_to_ENSMUST00000061244,NM_001159571,NM_010144,uc009ach.2,uc009aci.2,uc009acj.2_5end
|association_with_transcript=0bp_to_ENSMUST00000061244,NM_001159571,NM_010144,uc009ach.2,uc009aci.2,uc009acj.2_5end
|cluster_id=chr5:137791329..137791345,+
|description=CAGE_peak_1_at_Ephb4_5end
|description=CAGE_peak_1_at_Ephb4_5end
|id=chr5:137791329..137791345,+
|id=chr5:137791329..137791345,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002048!6.92e-10!14;UBERON:0000117!6.92e-10!14;UBERON:0000171!6.92e-10!14;UBERON:0000170!6.92e-10!14;UBERON:0005597!6.92e-10!14;UBERON:0000118!6.92e-10!14;UBERON:0000468!1.61e-09!333;UBERON:0000922!7.47e-08!328;UBERON:0005178!1.27e-07!17;UBERON:0005181!1.27e-07!17;UBERON:0002224!1.27e-07!17;UBERON:0000915!1.27e-07!17;UBERON:0008947!1.27e-07!17;UBERON:0003258!1.27e-07!17;UBERON:0005157!1.44e-07!27;UBERON:0005153!2.19e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002048,6.84e-10,14;UBERON:0000117,6.84e-10,14;UBERON:0000171,6.84e-10,14;UBERON:0000170,6.84e-10,14;UBERON:0005597,6.84e-10,14;UBERON:0000118,6.84e-10,14;UBERON:0005178,1.26e-07,17;UBERON:0005181,1.26e-07,17;UBERON:0002224,1.26e-07,17;UBERON:0000915,1.26e-07,17;UBERON:0008947,1.26e-07,17;UBERON:0003258,1.26e-07,17;UBERON:0005153,2.18e-07,17;UBERON:0005177,2.20e-07,79;UBERON:0005157,3.61e-07,20
|phase1_expression=26.7448574665006,3.48975407639361,3.18499467572675,1.81478526784098,2.50447864973174,20.8170297170743,20.3242997318107,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,0,0,0.137114433605739,0,15.6479653877968,0.0992909512008853,0,15.6792574337539,11.4704640533585,6.31655160526522,6.03066794622705,14.0056301245828,18.6222951067246,16.1299283046356,14.6342137032501,0,0,0,38.4172654269195,37.7352644963778,40.2213631836867,0,0,0,0,0,0,14.8558245211181,13.3817549209759,12.2976323948327,42.2491325947941,10.4652075062614,14.4992880604751,7.19390626574849,12.4587915246573,7.18762821824858,0,0,0,18.2654199585522,21.4900079954068,14.4388185837684,7.48570905180512,3.70293685490423,5.07065122804943,22.7025836486319,22.2323699027785,2.2497492932035,1.97773272513395,3.5524005747305,11.6844043102178,11.9107674649682,8.60623782160365,7.96535036156975,7.78202357000113,1.99955689082663,4.8591079009355,7.7169203505421,4.79227355091182,5.51531271966013,1.10115880999389,0.766124028511126,1.38245879930619,5.67111037239834,3.20206752608434,7.29278718779464,3.62937898701795,4.50210088025344,3.0559649555362,4.71405736757868,4.6982654663704,4.28718725398191,3.10477392666055,5.7434385681157,139.714683554209,20.6501730475533,1.3599426674155,7.01614149129162,5.84798775702902,3.13618820968135,8.84799846830037,7.49893419343454,4.93593408745451,7.77347063922748,17.6054274720851,28.2318250311499,33.1246811618639,42.6640021891999,9.09262372247099,8.36087556067825,8.08839112023653,12.5602267690966,3.88406825470758,19.7428044956217,29.4925055502431,23.748307308347,25.5983201954225,17.6345489446568,27.868523591162,18.3473223341326,7.91023896749996,15.9059292611903,4.42305275974937,18.1178871941098,9.27534377533653,14.0613823409214,13.0474232852686,1.75668478206928,2.09446706813455,15.8383374229327,0.239630249011841,0,0.381210681219194,2.54644086988199,2.74500361691176,2.38743269014442,2.9550134432687,2.55715457330331,2.49345653471472,2.27137768294861,37.7824039884673,13.0627319140598,3.53811861807145,6.94458124425364,36.6939649154824,20.921091503446,24.4884496535275,17.0296444154358,16.8730517895293,12.4270308676304,13.6804517857204,10.6068382002996,64.6703978798527,59.5684152528631,58.7676754707589,39.674427569391,36.4241896485533,34.8252166522167,25.9285491874009,39.8068533636986,0,0,0,36.2470101937128,33.7717526372778,29.8903022025285,40.9568392562414,32.8596267018164,29.773552787264,29.7643449280522,35.948635787549,40.8678698285093,31.1018116336478,36.9376794177964,34.9406569142638,28.6551975353651,27.6633145266724,38.5172421842267,1.89260953707715,8.64398743985989,3.30418782983798,25.3872543997003,40.098191100624,38.5512875288328,39.3045757032385,30.050845168878,30.0210359190575,20.9248188723815,17.0830462156024,22.5637567971895,21.8661631656234,24.0737331169792,25.1503672383665,24.268124033664,19.2362864388478,17.3252907731299,37.174908586804,38.9587427999175,54.0997131230786,33.8061204223222,32.3900653569935,39.8371456977009,42.4317164103766,27.7507078201652,26.0617888216682,28.0111562102487,13.0439155918346,11.8460025058427,13.3660116676978,9.66907083254871,13.3887680116412,17.8471098216788,18.8423130318251,13.8094145976389,15.2407113168533,13.1789478330279,21.5652309791032,32.7484033948283,19.6583734062173,18.185679212192,14.8899853223187,16.4030797263545,38.2439103644872,40.1721792953428,41.8819989456006,47.1891338455023,41.7748641953534,40.3690080434776,43.8000299230265,63.4184355537846,60.216625048565,76.4053179288273,56.9253524107229,48.175814526427,47.3156850312554,62.0544461314685,0,0,5.90117127622843,9.10591262805617,4.17431533968259,3.16471553798949,16.0656246469142,16.4106102682842,23.0321000173867,19.1314984705353,20.0343759891503,21.7461606136822,20.4974780155803,22.9291989938954,27.9319384155677,19.5811424800579,13.4397844501818,2.24924921495265,20.5813123551989,44.6944665204811,44.956800781587,23.7556977080451,10.619611067197,39.330463057107,35.9765032788054,22.255399411196,24.5100571091041,26.1319875752338,23.2585463851399,28.7191646287229,23.1723295950069,16.7499481705982,11.5960469432499,11.3449097573006,4.76615448055303,38.7131352167317,36.867224878085,38.366329270655,39.0148514013002,41.9166721364866,35.2134904088539,42.9295578251585,14.3149741918863,10.3797714723272,5.51320995137405,13.3557864882599,34.3919228862279,21.4110883494953,20.0545537925269,19.2044852701722,20.4036585640896,2.41052892613663,2.73393409276564,34.0538332139317,18.1490636822317,6.2161590811548,3.8274383761887,4.80434163733698,0.679913719975421,0.559805809294632,1.10559979043539,6.68269432610579,48.0830710243326,38.6306987541013,27.0013352054503,19.4452115293456,19.2159056096636,17.3975006836419,19.919482829806,12.5642852152334,24.3676149788571,6.83473244395618,2.25477175473676,30.5013753929717,26.8042754540498,27.2231663681667,26.4777638129349,26.5261117020522,26.8748076498777,19.0098401872167,17.6163698635194,6.03960302065015,4.60848010012585,1.58005560314089,25.3406519112705,15.6120654890537,7.27556608675652,8.59328139203911,8.54329825559439,4.32703618271888,4.28299628806274,3.63479219813331,3.50551310612999,2.31900225814733,1.75424185331554,1.44317762460494,1.16876902181569,9.29594572822367,4.88369097422942,4.57540668708326,2.68615386182526,14.1028403643499,13.3254557570339,18.3151624267265,8.7891035422417,7.52358156053045,1.12950368523413,0.920650473014354,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,2.71885445390523,0,20.1347454313303,25.936616771067,36.3662580256306,26.2555254433758,10.6902712940271,16.5459157605013,22.0024260523599,21.0155758383672,20.859748623468,29.8182709881281,22.0526990904509,20.9375238938545,23.7849428973501,20.4240236171533,21.9403491410443,25.719859329286,23.7562868186954,24.3065617784268,22.6647245441819,20.1662520584124,18.5149396288124,18.9899112590491,18.8364590058384,20.4938447451583,21.7392668759414,23.1844025623194,21.5855007989872,22.0978557607788,24.4447404922551,25.812544496256,26.2183390054425,24.2321026643886,17.5969348562966,22.1559682895931,27.7785519812844,28.7282164628638,23.3931608445408,27.2886238641339,29.6496914706707,18.5296792060393,19.4768981921154
|phase1_expression=26.7448574665006,3.48975407639361,3.18499467572675,1.81478526784098,2.50447864973174,20.8170297170743,20.3242997318107,0,0,0,0,0,0,0,1.33243904726265,1.21485160433896,0,0,0.137114433605739,0,15.6479653877968,0.0992909512008853,0,15.6792574337539,11.4704640533585,6.31655160526522,6.03066794622705,14.0056301245828,18.6222951067246,16.1299283046356,14.6342137032501,0,0,0,38.4172654269195,37.7352644963778,40.2213631836867,0,0,0,0,0,0,14.8558245211181,13.3817549209759,12.2976323948327,42.2491325947941,10.4652075062614,14.4992880604751,7.19390626574849,12.4587915246573,7.18762821824858,0,0,0,18.2654199585522,21.4900079954068,14.4388185837684,7.48570905180512,3.70293685490423,5.07065122804943,22.7025836486319,22.2323699027785,2.2497492932035,1.97773272513395,3.5524005747305,11.6844043102178,11.9107674649682,8.60623782160365,7.96535036156975,7.78202357000113,1.99955689082663,4.8591079009355,7.7169203505421,4.79227355091182,5.51531271966013,1.10115880999389,0.766124028511126,1.38245879930619,5.67111037239834,3.20206752608434,7.29278718779464,3.62937898701795,4.50210088025344,3.0559649555362,4.71405736757868,4.6982654663704,4.28718725398191,3.10477392666055,5.7434385681157,139.714683554209,20.6501730475533,1.3599426674155,7.01614149129162,5.84798775702902,3.13618820968135,8.84799846830037,7.49893419343454,4.93593408745451,7.77347063922748,17.6054274720851,28.2318250311499,33.1246811618639,42.6640021891999,9.09262372247099,8.36087556067825,8.08839112023653,12.5602267690966,3.88406825470758,19.7428044956217,29.4925055502431,23.748307308347,25.5983201954225,17.6345489446568,27.868523591162,18.3473223341326,7.91023896749996,15.9059292611903,4.42305275974937,18.1178871941098,9.27534377533653,14.0613823409214,13.0474232852686,1.75668478206928,2.09446706813455,15.8383374229327,0.239630249011841,0,0.381210681219194,2.54644086988199,2.74500361691176,2.38743269014442,2.9550134432687,2.55715457330331,2.49345653471472,2.27137768294861,37.7824039884673,13.0627319140598,3.53811861807145,6.94458124425364,36.6939649154824,20.921091503446,24.4884496535275,17.0296444154358,16.8730517895293,12.4270308676304,13.6804517857204,10.6068382002996,64.6703978798527,59.5684152528631,58.7676754707589,39.674427569391,36.4241896485533,34.8252166522167,25.9285491874009,39.8068533636986,0,0,0,36.2470101937128,33.7717526372778,29.8903022025285,40.9568392562414,32.8596267018164,29.773552787264,29.7643449280522,35.948635787549,40.8678698285093,31.1018116336478,36.9376794177964,34.9406569142638,28.6551975353651,27.6633145266724,38.5172421842267,1.89260953707715,8.64398743985989,3.30418782983798,25.3872543997003,40.098191100624,38.5512875288328,39.3045757032385,30.050845168878,30.0210359190575,20.9248188723815,17.0830462156024,22.5637567971895,21.8661631656234,24.0737331169792,25.1503672383665,24.268124033664,19.2362864388478,17.3252907731299,37.174908586804,38.9587427999175,54.0997131230786,33.8061204223222,32.3900653569935,39.8371456977009,42.4317164103766,27.7507078201652,26.0617888216682,28.0111562102487,13.0439155918346,11.8460025058427,13.3660116676978,9.66907083254871,13.3887680116412,17.8471098216788,18.8423130318251,13.8094145976389,15.2407113168533,13.1789478330279,21.5652309791032,32.7484033948283,19.6583734062173,18.185679212192,14.8899853223187,16.4030797263545,38.2439103644872,40.1721792953428,41.8819989456006,47.1891338455023,41.7748641953534,40.3690080434776,43.8000299230265,63.4184355537846,60.216625048565,76.4053179288273,56.9253524107229,48.175814526427,47.3156850312554,62.0544461314685,0,0,5.90117127622843,9.10591262805617,4.17431533968259,3.16471553798949,16.0656246469142,16.4106102682842,23.0321000173867,19.1314984705353,20.0343759891503,21.7461606136822,20.4974780155803,22.9291989938954,27.9319384155677,19.5811424800579,13.4397844501818,2.24924921495265,20.5813123551989,44.6944665204811,44.956800781587,23.7556977080451,10.619611067197,39.330463057107,35.9765032788054,22.255399411196,24.5100571091041,26.1319875752338,23.2585463851399,28.7191646287229,23.1723295950069,16.7499481705982,11.5960469432499,11.3449097573006,4.76615448055303,38.7131352167317,36.867224878085,38.366329270655,39.0148514013002,41.9166721364866,35.2134904088539,42.9295578251585,14.3149741918863,10.3797714723272,5.51320995137405,13.3557864882599,34.3919228862279,21.4110883494953,20.0545537925269,19.2044852701722,20.4036585640896,2.41052892613663,2.73393409276564,34.0538332139317,18.1490636822317,6.2161590811548,3.8274383761887,4.80434163733698,0.679913719975421,0.559805809294632,1.10559979043539,6.68269432610579,48.0830710243326,38.6306987541013,27.0013352054503,19.4452115293456,19.2159056096636,17.3975006836419,19.919482829806,12.5642852152334,24.3676149788571,6.83473244395618,2.25477175473676,30.5013753929717,26.8042754540498,27.2231663681667,26.4777638129349,26.5261117020522,26.8748076498777,19.0098401872167,17.6163698635194,6.03960302065015,4.60848010012585,1.58005560314089,25.3406519112705,15.6120654890537,7.27556608675652,8.59328139203911,8.54329825559439,4.32703618271888,4.28299628806274,3.63479219813331,3.50551310612999,2.31900225814733,1.75424185331554,1.44317762460494,1.16876902181569,9.29594572822367,4.88369097422942,4.57540668708326,2.68615386182526,14.1028403643499,13.3254557570339,18.3151624267265,8.7891035422417,7.52358156053045,1.12950368523413,0.920650473014354,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,1.35004500046361,1.80128481289688,2.71885445390523,0,20.1347454313303,25.936616771067,36.3662580256306,26.2555254433758,10.6902712940271,16.5459157605013,22.0024260523599,21.0155758383672,20.859748623468,29.8182709881281,22.0526990904509,20.9375238938545,23.7849428973501,20.4240236171533,21.9403491410443,25.719859329286,23.7562868186954,24.3065617784268,22.6647245441819,20.1662520584124,18.5149396288124,18.9899112590491,18.8364590058384,20.4938447451583,21.7392668759414,23.1844025623194,21.5855007989872,22.0978557607788,24.4447404922551,25.812544496256,26.2183390054425,24.2321026643886,17.5969348562966,22.1559682895931,27.7785519812844,28.7282164628638,23.3931608445408,27.2886238641339,29.6496914706707,18.5296792060393,19.4768981921154
|short_description=p1@Ephb4
|short_description=p1@Ephb4
}}
}}

Latest revision as of 14:42, 25 September 2015

Short description:p1@Ephb4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ephb4_5end
Coexpression cluster:MCL_coexpression_mm9:1813
Association with transcript: 0bp_to_ENSMUST00000061244, NM_001159571, NM_010144, uc009ach.2, uc009aci.2, uc009acj.2_5end
EntrezGene:Ephb4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ephb4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.47
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I214.01
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F538.42
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F637.74
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F740.22
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.38
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.30
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B742.25
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.49
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D122.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C811.68
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.61
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.67
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.06
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D93.10
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3139.71
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H128.23
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.36
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G38.09
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.56
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D719.74
adrenal gland, embryo E14.CNhs11038.406-44C529.49
adrenal gland, embryo E16.CNhs11004.1254-43D623.75
adrenal gland, embryo E17.CNhs11043.1263-45I125.60
adrenal gland, embryo E18.CNhs11026.1262-18F517.63
adrenal gland, neonate N00.CNhs11191.1311-23C127.87
adrenal gland, neonate N25.CNhs11223.1377-27I318.35
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H115.91
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F518.12
bone (os femoris), neonate N16.CNhs11225.1525-43A69.28
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H715.84
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B137.78
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.06
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C636.69
eyeball, embryo E14.CNhs10521.399-16E220.92
eyeball, embryo E15.CNhs10593.426-16C924.49
eyeball, embryo E17.CNhs11023.1261-18D417.03
eyeball, neonate N00.CNhs11207.633-15C616.87
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G813.68
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E264.67
forelimb, embryo E12.CNhs10600.359-14H259.57
forelimb, embryo E13.CNhs10589.384-1E258.77
forelimb, embryo E14.CNhs10577.413-26A839.67
forelimb, embryo E15.CNhs11007.437-20E736.42
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B525.93
gonad, embryo E13.CNhs11044.1564-45I639.81
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E936.25
heart, embryo E12.CNhs11015.353-12F533.77
heart, embryo E13.CNhs11013.376-3I929.89
heart, embryo E14.CNhs10597.403-26D440.96
heart, embryo E15.CNhs11017.431-16C832.86
heart, embryo E16.CNhs11021.457-17C629.77
heart, embryo E17.CNhs11025.479-18E529.76
heart, embryo E18.CNhs11030.1283-20G335.95
heart, neonate N00.CNhs11213.639-21E340.87
heart, neonate N03.CNhs11221.1349-25I231.10
heart, neonate N10.CNhs11118.749-24G136.94
heart, neonate N16.CNhs11209.782-15G134.94
heart, neonate N20.CNhs11127.821-26I628.66
heart, neonate N25.CNhs11196.1351-25D327.66
heart, neonate N30.CNhs11202.1390-42D238.52
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G18.64
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A325.39
intestine, embryo E12.CNhs11019.1251-16I540.10
intestine, embryo E13.CNhs11010.381-16D538.55
intestine, embryo E15.CNhs10602.976-16D839.30
intestine, embryo E16.CNhs10585.463-22H430.05
intestine, embryo E17.CNhs10582.482-18D330.02
intestine, embryo E18.CNhs10526.1289-20F720.92
intestine, neonate N00.CNhs11126.644-26D117.08
intestine, neonate N01.CNhs11192.1322-23E922.56
intestine, neonate N06.CNhs11102.688-20B821.87
intestine, neonate N07.CNhs11095.720-20F224.07
intestine, neonate N10.CNhs11098.755-23A525.15
intestine, neonate N20.CNhs11187.827-18D124.27
intestine, neonate N25.CNhs11121.1352-25E319.24
intestine, neonate N30.CNhs11131.1384-42G117.33
kidney, embryo E14.CNhs10606.411-4I937.17
kidney, embryo E15.CNhs10997.434-16F838.96
kidney, embryo E16.CNhs10584.464-22A554.10
kidney, embryo E17.CNhs11028.483-18I233.81
kidney, embryo E18.CNhs11001.1288-20C732.39
kidney, neonate N00.CNhs11214.646-21G739.84
kidney, neonate N10.CNhs11206.758-6D542.43
kidney, neonate N20.CNhs11113.832-19I127.75
kidney, neonate N25.CNhs11122.1353-25F326.06
kidney, neonate N30.CNhs11203.1385-42H128.01
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F811.85
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E19.67
liver, embryo E15.CNhs10520.433-16D713.39
liver, embryo E16.CNhs10523.462-17F517.85
liver, embryo E17.CNhs10510.481-18A318.84
liver, embryo E18.CNhs10579.499-43G413.81
liver, neonate N00.CNhs11117.641-24F415.24
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A821.57
liver, neonate N07.CNhs11103.716-20H232.75
liver, neonate N10.CNhs11115.751-24B919.66
liver, neonate N20.CNhs11220.823-25A318.19
liver, neonate N25.CNhs11198.1368-26H114.89
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B138.24
lung, embryo E12.CNhs10522.354-16G240.17
lung, embryo E14.CNhs10604.404-26F841.88
lung, embryo E15.CNhs11020.432-17C547.19
lung, embryo E16.CNhs10998.458-17B641.77
lung, embryo E17.CNhs10605.480-44A640.37
lung, embryo E18.CNhs10583.1287-20I643.80
lung, neonate N00.CNhs11224.640-42C663.42
lung, neonate N06.CNhs11212.683-20E560.22
lung, neonate N07.CNhs11111.715-19A376.41
lung, neonate N10.CNhs11219.750-23E656.93
lung, neonate N20.CNhs11109.822-18A448.18
lung, neonate N25.CNhs11119.1359-25C747.32
lung, neonate N30.CNhs11133.1394-42H262.05
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C716.07
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.50
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D922.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D427.93
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.44
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I720.58
ovary, embryo E18.CNhs11040.505-44H744.69
ovary, neonate N00.CNhs11217.1299-22I444.96
oviduct, adult pregnant day01.CNhs10500.988-6G623.76
pancreas, adult.CNhs10486.34-16E410.62
pancreas, embryo E14.CNhs11012.405-44F439.33
pancreas, embryo E15.CNhs11042.1556-45F235.98
pancreas, embryo E16.CNhs11003.460-26E522.26
pancreas, embryo E17.CNhs10599.1558-45G324.51
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G923.26
pancreas, neonate N01.CNhs11138.1531-43D728.72
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B616.75
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E638.71
pituitary gland, embryo E13.CNhs11009.370-44C736.87
pituitary gland, embryo E14.CNhs11037.398-44A538.37
pituitary gland, embryo E15.CNhs10592.427-16B939.01
pituitary gland, embryo E16.CNhs11036.449-43F641.92
pituitary gland, embryo E17.CNhs11039.1265-44F535.21
pituitary gland, neonate N00.CNhs11190.1308-22E942.93
placenta, adult pregnant day10.CNhs10472.539-13I714.31
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F85.51
skin, adult.CNhs10492.30-1C313.36
skin, neonate N00.CNhs11124.650-25G434.39
skin, neonate N03.CNhs11215.662-22H321.41
skin, neonate N06.CNhs11097.693-20I520.05
skin, neonate N10.CNhs11108.762-6C419.20
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C92.41
spleen, adult.CNhs10465.25-2G22.73
spleen, embryo E16.CNhs11035.461-43C134.05
spleen, embryo E18.CNhs11011.1271-21F218.15
spleen, neonate N10.CNhs11116.752-24D16.22
spleen, neonate N20.CNhs11112.824-19H13.83
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E348.08
stomach, embryo E15.CNhs10603.1252-16G838.63
stomach, embryo E16.CNhs11022.459-17D427.00
stomach, embryo E17.CNhs11006.1035-18D519.45
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A919.92
stomach, neonate N25.CNhs11104.1355-25E412.56
stomach, neonate N30.CNhs11134.1386-42I124.37
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F530.50
testis, embryo E15.CNhs11034.443-27C526.80
testis, embryo E16.CNhs11033.470-26G527.22
testis, embryo E17.CNhs11029.486-18I526.48
testis, embryo E18.CNhs11027.503-18G526.53
testis, neonate N00.CNhs11189.1300-22B726.87
testis, neonate N07.CNhs11222.726-26I419.01
testis, neonate N10.CNhs11204.763-44D917.62
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I425.34
thymus, embryo E15.CNhs11005.430-45I215.61
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C18.59
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C43.63
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.32
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B49.30
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.58
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.69
urinary bladder, adult.CNhs10481.879-12E414.10
uterus, adult pregnant day19.CNhs10497.590-15F513.33
uterus, adult.CNhs10509.92-27E518.32
vagina, adult.CNhs10502.89-27D58.79
vesicular gland, adult.CNhs10491.51-27F87.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I820.13
whole body, embryo E12.CNhs10587.857-27C925.94
whole body, embryo E13.CNhs10512.372-23H236.37
whole body, embryo E14.5.CNhs10578.420-27D226.26
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F216.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G520.86
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.05
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.17
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G518.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G525.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G517.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.16
whole body, embryo E17.5.CNhs10513.490-9F927.78
whole body, embryo E17.CNhs10517.475-3I528.73
whole body, embryo E18.CNhs10516.493-3B323.39
whole body, neonate N00.CNhs10525.657-19C227.29
whole body, neonate N01.CNhs10576.659-23C629.65
whole body, neonate N06.CNhs10515.692-21D118.53
whole body, neonate N10.CNhs10518.761-6B419.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung6.84e-1014
respiratory tube6.84e-1014
respiration organ6.84e-1014
pair of lungs6.84e-1014
lung primordium6.84e-1014
lung bud6.84e-1014
thoracic cavity element1.26e-0717
thoracic segment organ1.26e-0717
thoracic cavity1.26e-0717
thoracic segment of trunk1.26e-0717
respiratory primordium1.26e-0717
endoderm of foregut1.26e-0717
epithelial bud2.18e-0717
trunk region element2.20e-0779
epithelial fold3.61e-0720
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:137791329..137791345,%2B&oldid=4197124"