FFCP PHASE1:Mm9::chr7:106976797..106976818,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=50877|HGNC=|UniProt=Q9JMH7,Q543I9|association_with_transcript=108bp_to_ENSMUST00000036331,NM_016720,uc009imc.1_5end|description=CAGE_peak_2_at_Neu3_5end|id=chr7:106976797..106976818,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!3.31e-07!193;UBERON:0004120!3.31e-07!193;UBERON:0006603!3.31e-07!193;UBERON:0001048!9.21e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.90e-08,134;UBERON:0004921,4.20e-07,114|phase1_expression=0.80074423552397,0,0.454999239389536,3.62957053568196,4.00716583957078,0.503637815735669,0,0.258246646883153,0,0,0,0,0,0,2.33176833270964,1.01237633694913,1.39912375625629,0,0,0,0.425216450755349,0,0,0.639969691173627,0,0.57423196411502,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,0.917733760808408,5.47673941043627,2.61630187656536,1.75748946187577,2.91644848611425,1.53985063787899,2.87505128729943,0,0,0.336093799142464,6.17422646486273,9.16907007804022,8.25075347643908,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0,0.883474163806454,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,6.66688324013859,2.58127163094416,0.679971333707751,0,3.89865850468601,0,1.12355536105401,0.681721290312231,1.03914401841148,0.70667914902068,0.14084341977668,8.98285341900225,10.1922095882658,7.11066703153331,1.94841936910093,1.26679932737549,0.505524445014783,0.5709193985953,0,0.742210695324124,0.346970653532272,0.608930956624282,0.922461989024234,0.452167921657868,0.587943535678524,0.628332956648377,13.1013332899218,1.15679485535929,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.255457055208591,0,0.599902730993408,0,0.299581278809645,0.915001205637253,0,0.347648640384553,0,0,0.324482526135515,2.13862664085664,1.7416975885413,0.505445516867349,1.05220927943237,0.260240885925407,0,0.720248519221397,0.150704817835715,0.476255494059295,0.640568601424249,0.468508622798644,1.81092359517311,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.278047249225598,2.089512999133,2.88094990971121,2.18937693500343,0,0,0,1.24275463521301,1.40715635988658,0.720248245844059,0.473489471170421,0.787056926989615,1.07986979021165,0.697601834251224,1.87791380979733,0.934122738937356,1.15191894939436,0.656669856316381,1.4592385718254,1.75439984910399,1.75640092232841,2.14730270016595,0.210289948564127,0.308713837137853,2.64335026387038,0.264450566663544,0.639864751605702,0.464473343720877,0.644337306610467,2.8235693447268,2.2237804384487,2.66315876557583,0.949058123089023,1.64698954724011,1.75934646160189,0.994782360205754,1.36474860983384,0,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,1.68325967736765,0.69560190836683,1.77132177575523,1.56998727841375,1.97435462274881,1.1858105083486,0.667380422864376,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,0.538192240565737,1.92977408545347,1.84753190166605,0.757965647081939,0.325929952884052,1.01847051465113,2.81628297946203,5.19269398069629,5.71304738126433,4.87834119644497,1.41871629695572,1.55025282754142,0.318909537314974,2.29408640602033,0.690739927463582,2.4590339958857,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0.584511715822624,0.790575555893047,0.963963949265421,4.25820255624806,0.712262414669021,1.95464351224291,1.15479086080775,2.65490276679926,0.728341908464944,0,0.377210159511796,0,0,1.55056975900933,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,4.6310963591542,1.97863503529776,1.29171541356724,1.14594557363496,1.07435109602823,1.47726809770555,2.62332752966866,0.370850604021019,0.683483523191411,1.857481811669,1.29636169158798,1.13021074202815,1.0935538217682,0.457556346413045,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,1.58167996790568,0.813277868507395,1.62008011232702,1.25452977608681,2.40198820120795,1.61837215661785,1.57041565878138,1.30877970992015,0.388844919875379,0,0,1.34564891439581,0.66183396182839,0.777804753376191,1.29159823477731,1.35164900392623,1.29092962510329,0.39061315453185,1.04859344425711,0,0.288030006257865,0.632022241256357,2.43270258348197,1.74608627180206,1.42912905275575,1.79026695667481,1.78813219303138,2.04332264183947,0.738447635872886,1.21159739937777,0.762068066549998,1.10908803650525,0.779663045918019,0.481059208201647,1.16876902181569,0.453460767230423,0.665957860122194,0.269141569828427,0.503653849092235,2.12508553435409,0.563047426353546,0.549454872801795,1.71494703263253,3.51100472824754,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,1.51618327058278,0.760437899670719,1.13175804831646,0.936415074698824,0.832326981263301,0.516919220600519,1.90517476513229,0.579421629724277,0.964546102318525,1.23625770240992,1.76638704161277,0.685738504770831,1.77475806159337,1.66905332963125,1.16277133305863,1.50575008664529,0.423073039458382,0.914639864363863,0.263069711437843,1.08643291076689,1.12228454331548,0.711810108745045,0.394017929502254,2.04615521584845,0.77468420592983,1.92906610981141,0.749431733813838,0.935726433781634,2.14871054048298,0.382576664137687,0.661774257358546,0.231867835620421|short_description=p2@Neu3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50877 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q9JMH7,Q543I9 | |||
|association_with_transcript=108bp_to_ENSMUST00000036331,NM_016720,uc009imc.1_5end | |||
|cluster_id=chr7:106976797..106976818,- | |||
|description=CAGE_peak_2_at_Neu3_5end | |||
|id=chr7:106976797..106976818,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!3.31e-07!193;UBERON:0004120!3.31e-07!193;UBERON:0006603!3.31e-07!193;UBERON:0001048!9.21e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.90e-08,134;UBERON:0004921,4.20e-07,114 | |||
|phase1_expression=0.80074423552397,0,0.454999239389536,3.62957053568196,4.00716583957078,0.503637815735669,0,0.258246646883153,0,0,0,0,0,0,2.33176833270964,1.01237633694913,1.39912375625629,0,0,0,0.425216450755349,0,0,0.639969691173627,0,0.57423196411502,0,0,0,0,0,2.54012269383853,1.84519436275371,0,0.288851619751275,0,0,0,0,0,0,0,0,1.88845226963366,1.31790010585369,0.917733760808408,5.47673941043627,2.61630187656536,1.75748946187577,2.91644848611425,1.53985063787899,2.87505128729943,0,0,0.336093799142464,6.17422646486273,9.16907007804022,8.25075347643908,0,0,0,0.677689064138264,0.889294796111139,0.449949858640699,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.270011876663381,0.210324961351382,0,0.883474163806454,0,0,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.45839474333043,0.294628585473668,0.569486723196412,0.186399445825301,0.151452386666368,0.0755715601067855,6.66688324013859,2.58127163094416,0.679971333707751,0,3.89865850468601,0,1.12355536105401,0.681721290312231,1.03914401841148,0.70667914902068,0.14084341977668,8.98285341900225,10.1922095882658,7.11066703153331,1.94841936910093,1.26679932737549,0.505524445014783,0.5709193985953,0,0.742210695324124,0.346970653532272,0.608930956624282,0.922461989024234,0.452167921657868,0.587943535678524,0.628332956648377,13.1013332899218,1.15679485535929,0,0.323533699894818,0.441683036920787,0.969750506270444,0,0,0.83778682725382,0.255457055208591,0,0.599902730993408,0,0.299581278809645,0.915001205637253,0,0.347648640384553,0,0,0.324482526135515,2.13862664085664,1.7416975885413,0.505445516867349,1.05220927943237,0.260240885925407,0,0.720248519221397,0.150704817835715,0.476255494059295,0.640568601424249,0.468508622798644,1.81092359517311,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.278047249225598,2.089512999133,2.88094990971121,2.18937693500343,0,0,0,1.24275463521301,1.40715635988658,0.720248245844059,0.473489471170421,0.787056926989615,1.07986979021165,0.697601834251224,1.87791380979733,0.934122738937356,1.15191894939436,0.656669856316381,1.4592385718254,1.75439984910399,1.75640092232841,2.14730270016595,0.210289948564127,0.308713837137853,2.64335026387038,0.264450566663544,0.639864751605702,0.464473343720877,0.644337306610467,2.8235693447268,2.2237804384487,2.66315876557583,0.949058123089023,1.64698954724011,1.75934646160189,0.994782360205754,1.36474860983384,0,0.432276099749388,0.199141273254367,0.379335801906163,0.342745537829186,0,0.407302655690628,0.193952487167626,1.68325967736765,0.69560190836683,1.77132177575523,1.56998727841375,1.97435462274881,1.1858105083486,0.667380422864376,0.982794975566015,0.449724224769707,1.01430060694251,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,1.51547326768267,0.538192240565737,1.92977408545347,1.84753190166605,0.757965647081939,0.325929952884052,1.01847051465113,2.81628297946203,5.19269398069629,5.71304738126433,4.87834119644497,1.41871629695572,1.55025282754142,0.318909537314974,2.29408640602033,0.690739927463582,2.4590339958857,0,0,0,0.275936746304732,0.642202359951168,0.35163505977661,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0.584511715822624,0.790575555893047,0.963963949265421,4.25820255624806,0.712262414669021,1.95464351224291,1.15479086080775,2.65490276679926,0.728341908464944,0,0.377210159511796,0,0,1.55056975900933,0,0.356497378384721,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.658196082408484,0.304464949114599,0.23467170806371,0.63549621259146,4.6310963591542,1.97863503529776,1.29171541356724,1.14594557363496,1.07435109602823,1.47726809770555,2.62332752966866,0.370850604021019,0.683483523191411,1.857481811669,1.29636169158798,1.13021074202815,1.0935538217682,0.457556346413045,0.169978429993855,0.419854356970974,0.138199973804424,0.954670618015114,1.58167996790568,0.813277868507395,1.62008011232702,1.25452977608681,2.40198820120795,1.61837215661785,1.57041565878138,1.30877970992015,0.388844919875379,0,0,1.34564891439581,0.66183396182839,0.777804753376191,1.29159823477731,1.35164900392623,1.29092962510329,0.39061315453185,1.04859344425711,0,0.288030006257865,0.632022241256357,2.43270258348197,1.74608627180206,1.42912905275575,1.79026695667481,1.78813219303138,2.04332264183947,0.738447635872886,1.21159739937777,0.762068066549998,1.10908803650525,0.779663045918019,0.481059208201647,1.16876902181569,0.453460767230423,0.665957860122194,0.269141569828427,0.503653849092235,2.12508553435409,0.563047426353546,0.549454872801795,1.71494703263253,3.51100472824754,0,0.460325236507177,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0.399024873401031,0.682934423016537,0.486213434136588,0.628839487883947,0.919217542250071,0.888986911206461,0.618105171716683,0.962757628775446,1.51618327058278,0.760437899670719,1.13175804831646,0.936415074698824,0.832326981263301,0.516919220600519,1.90517476513229,0.579421629724277,0.964546102318525,1.23625770240992,1.76638704161277,0.685738504770831,1.77475806159337,1.66905332963125,1.16277133305863,1.50575008664529,0.423073039458382,0.914639864363863,0.263069711437843,1.08643291076689,1.12228454331548,0.711810108745045,0.394017929502254,2.04615521584845,0.77468420592983,1.92906610981141,0.749431733813838,0.935726433781634,2.14871054048298,0.382576664137687,0.661774257358546,0.231867835620421 | |||
|short_description=p2@Neu3 | |||
}} |
Latest revision as of 14:24, 25 September 2015
Short description: | p2@Neu3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Neu3_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENSMUST00000036331, NM_016720, uc009imc.1_5end |
EntrezGene: | Neu3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 3.90e-08 | 134 |
subdivision of digestive tract | 4.20e-07 | 114 |