FFCP PHASE1:Mm9::chr10:110447057..110447081,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320150 | |EntrezGene=320150 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TRB3 | |UniProt=Q3TRB3 | ||
|association_with_transcript=0bp_to_ENSMUST00000099285_5end | |association_with_transcript=0bp_to_ENSMUST00000099285_5end | ||
|cluster_id=chr10:110447057..110447081,- | |||
|description=CAGE_peak_1_at_Zdhhc17_5end | |description=CAGE_peak_1_at_Zdhhc17_5end | ||
|id=chr10:110447057..110447081,- | |id=chr10:110447057..110447081,- | ||
|ontology_enrichment_celltype=CL:0000540!1.75e-09!33;CL:0000047!1.75e-09!33;CL:0000031!1.75e-09!33;CL:0000404!1.75e-09!33;CL:0000117!1.96e-09!23;CL:0000337!1.96e-09!23;CL:0000393!1.85e-08!39;CL:0000211!1.85e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.75e-09,33;CL:0000047,1.75e-09,33;CL:0000031,1.75e-09,33;CL:0000404,1.75e-09,33;CL:0000117,1.96e-09,23;CL:0000337,1.96e-09,23;CL:0000393,1.85e-08,39;CL:0000211,1.85e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.01e-20!94;UBERON:0007811!3.67e-19!86;UBERON:0000033!1.89e-17!63;UBERON:0002346!6.67e-16!71;UBERON:0003075!6.67e-16!71;UBERON:0007284!6.67e-16!71;UBERON:0003056!3.48e-15!49;UBERON:0000955!5.96e-15!50;UBERON:0006238!5.96e-15!50;UBERON:0001017!8.49e-15!73;UBERON:0005743!8.49e-15!73;UBERON:0001049!1.22e-14!52;UBERON:0005068!1.22e-14!52;UBERON:0006241!1.22e-14!52;UBERON:0007135!1.22e-14!52;UBERON:0002616!2.74e-14!49;UBERON:0000073!4.52e-14!75;UBERON:0001016!4.52e-14!75;UBERON:0004121!1.43e-13!102;UBERON:0000924!1.43e-13!102;UBERON:0006601!1.43e-13!102;UBERON:0002020!2.41e-13!34;UBERON:0003080!5.01e-12!40;UBERON:0002791!5.65e-12!29;UBERON:0003528!5.65e-12!29;UBERON:0001893!5.65e-12!29;UBERON:0002780!2.11e-11!39;UBERON:0001890!2.11e-11!39;UBERON:0006240!2.11e-11!39;UBERON:0000475!1.80e-08!200;UBERON:0000477!2.49e-08!154;UBERON:0000956!6.57e-08!21;UBERON:0001869!6.57e-08!21;UBERON:0000203!6.57e-08!21;UBERON:0000025!2.35e-07!114;UBERON:0002021!5.48e-07!10;UBERON:0000411!5.48e-07!10;UBERON:0001950!5.48e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.86e-18,64;UBERON:0003075,6.86e-18,64;UBERON:0007284,6.86e-18,64;UBERON:0000073,8.24e-16,54;UBERON:0003056,3.48e-15,49;UBERON:0010314,7.87e-15,92;UBERON:0001017,8.49e-15,73;UBERON:0004121,9.49e-15,95;UBERON:0000924,9.49e-15,95;UBERON:0006601,9.49e-15,95;UBERON:0010371,1.16e-14,73;UBERON:0001049,1.22e-14,52;UBERON:0005068,1.22e-14,52;UBERON:0006241,1.22e-14,52;UBERON:0007135,1.22e-14,52;UBERON:0001016,4.52e-14,75;UBERON:0002020,2.41e-13,34;UBERON:0000955,3.63e-13,47;UBERON:0006238,3.63e-13,47;UBERON:0002616,1.58e-12,46;UBERON:0003080,5.01e-12,40;UBERON:0003528,5.65e-12,29;UBERON:0002791,5.65e-12,29;UBERON:0001893,5.65e-12,29;UBERON:0002780,2.11e-11,39;UBERON:0001890,2.11e-11,39;UBERON:0006240,2.11e-11,39;UBERON:0000956,6.57e-08,21;UBERON:0001869,6.57e-08,21;UBERON:0000203,6.57e-08,21;UBERON:0000025,2.35e-07,114;UBERON:0002021,5.48e-07,10;UBERON:0000411,5.48e-07,10;UBERON:0001950,5.48e-07,10 | |||
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| ||
|short_description=p1@Zdhhc17 | |short_description=p1@Zdhhc17 | ||
}} | }} |
Latest revision as of 14:22, 25 September 2015
Short description: | p1@Zdhhc17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zdhhc17_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000099285_5end |
EntrezGene: | Zdhhc17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.75e-09 | 33 |
neuronal stem cell | 1.75e-09 | 33 |
neuroblast | 1.75e-09 | 33 |
electrically signaling cell | 1.75e-09 | 33 |
CNS neuron (sensu Vertebrata) | 1.96e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-09 | 23 |
electrically responsive cell | 1.85e-08 | 39 |
electrically active cell | 1.85e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 6.86e-18 | 64 |
neural plate | 6.86e-18 | 64 |
presumptive neural plate | 6.86e-18 | 64 |
regional part of nervous system | 8.24e-16 | 54 |
pre-chordal neural plate | 3.48e-15 | 49 |
structure with developmental contribution from neural crest | 7.87e-15 | 92 |
central nervous system | 8.49e-15 | 73 |
ectoderm-derived structure | 9.49e-15 | 95 |
ectoderm | 9.49e-15 | 95 |
presumptive ectoderm | 9.49e-15 | 95 |
ecto-epithelium | 1.16e-14 | 73 |
neural tube | 1.22e-14 | 52 |
neural rod | 1.22e-14 | 52 |
future spinal cord | 1.22e-14 | 52 |
neural keel | 1.22e-14 | 52 |
nervous system | 4.52e-14 | 75 |
gray matter | 2.41e-13 | 34 |
brain | 3.63e-13 | 47 |
future brain | 3.63e-13 | 47 |
regional part of brain | 1.58e-12 | 46 |
anterior neural tube | 5.01e-12 | 40 |
brain grey matter | 5.65e-12 | 29 |
regional part of telencephalon | 5.65e-12 | 29 |
telencephalon | 5.65e-12 | 29 |
regional part of forebrain | 2.11e-11 | 39 |
forebrain | 2.11e-11 | 39 |
future forebrain | 2.11e-11 | 39 |
cerebral cortex | 6.57e-08 | 21 |
cerebral hemisphere | 6.57e-08 | 21 |
pallium | 6.57e-08 | 21 |
tube | 2.35e-07 | 114 |
occipital lobe | 5.48e-07 | 10 |
visual cortex | 5.48e-07 | 10 |
neocortex | 5.48e-07 | 10 |