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FFCP PHASE1:Mm9::chr7:106683949..106684008,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109689
|EntrezGene=109689
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BWG8
|UniProt=Q8BWG8
|association_with_transcript=0bp_to_ENSMUST00000098266,NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end
|association_with_transcript=0bp_to_ENSMUST00000098266,NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end
|cluster_id=chr7:106683949..106684008,+
|description=CAGE_peak_3_at_Arrb1_5end
|description=CAGE_peak_3_at_Arrb1_5end
|id=chr7:106683949..106684008,+
|id=chr7:106683949..106684008,+
|ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23
|ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-07,23;CL:0000337,1.36e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000955!6.21e-11!50;UBERON:0006238!6.21e-11!50;UBERON:0002616!2.17e-10!49;UBERON:0001017!3.19e-10!73;UBERON:0005743!3.19e-10!73;UBERON:0002020!4.61e-10!34;UBERON:0001049!4.84e-10!52;UBERON:0005068!4.84e-10!52;UBERON:0006241!4.84e-10!52;UBERON:0007135!4.84e-10!52;UBERON:0000033!5.07e-10!63;UBERON:0002791!9.91e-10!29;UBERON:0003528!9.91e-10!29;UBERON:0001893!9.91e-10!29;UBERON:0000073!5.10e-09!75;UBERON:0001016!5.10e-09!75;UBERON:0003056!5.98e-09!49;UBERON:0003080!8.46e-09!40;UBERON:0002346!1.97e-08!71;UBERON:0003075!1.97e-08!71;UBERON:0007284!1.97e-08!71;UBERON:0002780!3.04e-08!39;UBERON:0001890!3.04e-08!39;UBERON:0006240!3.04e-08!39;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14;UBERON:0005153!9.21e-07!17;UBERON:0004121!9.85e-07!102;UBERON:0000924!9.85e-07!102;UBERON:0006601!9.85e-07!102;UBERON:0000956!9.87e-07!21;UBERON:0001869!9.87e-07!21;UBERON:0000203!9.87e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-11,54;UBERON:0001017,3.19e-10,73;UBERON:0002020,4.61e-10,34;UBERON:0001049,4.84e-10,52;UBERON:0005068,4.84e-10,52;UBERON:0006241,4.84e-10,52;UBERON:0007135,4.84e-10,52;UBERON:0003528,9.91e-10,29;UBERON:0002791,9.91e-10,29;UBERON:0001893,9.91e-10,29;UBERON:0000955,1.31e-09,47;UBERON:0006238,1.31e-09,47;UBERON:0002346,1.53e-09,64;UBERON:0003075,1.53e-09,64;UBERON:0007284,1.53e-09,64;UBERON:0002616,4.35e-09,46;UBERON:0001016,5.29e-09,75;UBERON:0003056,5.97e-09,49;UBERON:0003080,8.46e-09,40;UBERON:0002780,3.04e-08,39;UBERON:0001890,3.04e-08,39;UBERON:0006240,3.04e-08,39;UBERON:0004121,2.31e-07,95;UBERON:0000924,2.31e-07,95;UBERON:0006601,2.31e-07,95;UBERON:0002048,3.08e-07,14;UBERON:0000117,3.08e-07,14;UBERON:0000171,3.08e-07,14;UBERON:0000170,3.08e-07,14;UBERON:0005597,3.08e-07,14;UBERON:0000118,3.08e-07,14;UBERON:0005153,9.21e-07,17;UBERON:0000956,9.87e-07,21;UBERON:0001869,9.87e-07,21;UBERON:0000203,9.87e-07,21
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|phase1_expression=3.20297694209588,5.23463111459042,4.54999239389536,9.0739263392049,11.0197060588196,4.70061961353291,4.67225281191051,5.93967287831251,1.40788722151667,0.468129052643987,0.171217968225505,0.159544317990673,6.33442700745461,6.03200776691082,7.32841475994458,8.50396123037269,7.69518065940961,6.30924330716475,8.5010948835558,4.66828616977833,6.63337663178344,5.65958421845046,5.48519557191764,5.91971964335605,3.67054849707472,2.8711598205751,2.15380998079537,3.23206849028834,3.99049180858385,5.04060259519861,2.21730510655305,34.2916563668201,36.9038872550742,15.8481681015439,6.06588401477677,6.4831511689812,7.55426618170766,11.3003540298965,5.4693474116666,8.89990364755457,9.99993529652724,12.9778642142105,7.2826552954673,2.01434908760924,2.12891555560981,2.20256102594018,2.34717403304412,1.30815093828268,3.29529274101708,2.3331587888914,3.91961980551015,1.43752564364972,4.86569557567435,5.07753499407941,3.6970317905671,1.02903774414379,4.29800159908135,1.54701627683233,11.9366711907163,8.99284664762456,13.3104594736298,4.40497891689872,0,6.74924787961049,8.89979726310277,4.9733608046227,6.2916023208865,4.61061966385865,10.0578923939223,11.8805225731888,9.04397333810943,11.1403883917483,6.62605622854841,6.61450315760752,8.24271050756833,7.35375029288017,12.1127469099328,11.1087984134113,12.9029487935245,11.0784481693363,9.97215315266265,8.33461392890816,9.77140496504833,13.5063026407603,13.2934475565825,7.07108605136802,7.11858403995515,7.26957838718672,0.605809546665472,2.19157524309678,10.4351215932604,2.58127163094416,0,0,0,0.448026887097336,3.23022166303029,2.72688516124892,4.1565760736459,3.88673531961374,3.80277233397037,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.01104889002957,3.65388415100992,7.50919862576798,6.97678053604676,5.89850111004862,2.74018930480927,6.45723392316964,4.37095657602605,6.58496759959947,5.52933001850572,5.6854842578906,4.77177877835708,10.6153266233985,7.117741397686,6.62524555381181,4.363877278217,5.59175283654366,13.1751358655196,9.84399522023239,7.40825460104915,4.55297473122497,2.39961092397363,5.20987930999565,23.5171303865572,19.6725259212009,7.53926112677186,17.5562563394199,12.0186264945255,15.584103341967,13.4660248346239,8.04530974417499,5.22509276562391,2.52722758433675,4.8401626853889,3.3831315170303,5.0578462975364,7.92273371143537,6.32960234910003,10.6136938676071,9.09607414022434,11.5253121208466,9.05461797586555,7.11374376678379,7.18603104637713,7.03804496655795,3.72632745126877,4.72680323683516,2.78601733217733,5.76189981942242,7.36426787228425,4.91549231119264,3.08817488537658,4.83077948972507,6.62802472113606,5.15957331958412,5.94204802821349,6.39210786080068,3.93528463494808,5.86215028972037,4.41814495025775,7.51165523918934,7.35621656913168,3.62031669809657,3.61168420974009,2.51313309592153,3.65499968563331,4.83010253640311,5.36825675041487,13.4585567081041,14.7153595702377,4.29544417878937,6.34681359992506,10.024547775156,8.59275685883622,9.02072229254653,8.0673409849337,7.11609740303585,4.56541502670142,7.59246498471219,4.11747386810027,8.54539709920916,9.94782360205754,6.82374304916921,5.39291645192533,9.51007419448655,9.16049856970089,7.39704813717019,5.71242563048644,5.63538678365402,7.73875045812194,8.14600446104028,7.08371780892217,9.54871710576285,6.19962621514329,5.33795674660674,6.91024117962083,1.48226313543574,8.67594549723689,10.0245087507734,7.87017393346988,7.30296436998611,6.51178331331525,3.8193877767213,4.60313819921297,5.5125977103512,5.49122826376163,7.18841032636773,5.20997326735905,2.49630138491648,1.76805214562978,1.61457672169721,2.8946611281802,12.9327233116623,8.14813070613084,11.2445833744998,8.14776411720903,8.91822943496308,9.88286918906713,15.9489239393629,9.36641509717434,16.3940549870439,18.1601045511995,12.9158362612565,12.7813385478276,10.3610989119537,12.8737662137545,3.01582567878545,4.35124547054968,3.93411418415229,8.55403913544671,14.6101036888891,13.9481907044722,0.819674726883377,3.28212205365685,6.62567260774139,2.73307121007647,5.60100834105277,6.4521575447189,8.46634961513098,8.77537245445381,6.47697122679831,6.42962887404886,5.92931666919785,15.7447445046685,7.66476460124651,5.1639025063504,8.1443479676788,10.7230579932148,6.63725691699814,2.91336763385978,1.209294227859,2.07465587731488,2.36241514304618,4.61152721915891,5.42699415653264,4.72593848320757,3.92147116223193,3.47640433729398,2.10837217149998,3.09406629744561,2.7235168460303,3.96134406868882,7.37344497561701,5.14408884075822,4.96552654198366,6.42127743367454,4.44282355625727,8.82948352432338,5.86679270159276,15.2519091021951,8.60060752414351,4.28704257647848,5.16686165426898,3.25689794612042,2.86493625607528,3.28281799490123,8.74442509889552,11.6817940266621,7.68918963590337,9.28740905834501,12.5932278611404,8.4765805652111,8.61173634642459,6.86334519619568,6.11922347977879,6.71766971153558,4.97519905695926,4.77335309007557,10.7554237817586,6.30290348093231,5.61627772273367,5.01811910434725,5.45906409365444,7.01294601201068,9.09188012978695,7.85267825952089,7.38805347763219,11.1841076355647,3.38215763210514,6.13017838780313,7.1147150896552,7.58359634541786,8.78286799648571,10.1373675294467,8.33236394384853,4.1665403150064,3.67007705489988,1.69108884578204,1.72818003754719,1.89606672376907,4.86540516696394,4.21114924375792,4.02754551231165,5.37080087002444,4.76835251475036,3.36547258655913,4.13530676088816,2.62512769865184,5.33447646584999,3.2264379243789,3.50848370663109,3.65604998233252,3.15567635890236,4.30787728868902,2.66383144048878,2.06341870201794,2.3503846290971,9.65947970160952,5.06742683718191,8.42497471629419,2.14368379079066,16.551879433167,14.6835479080437,8.28585425712918,12.0308057822273,9.6237782112465,15.7568979547248,14.3524840504043,12.8254275044043,12.158672487054,9.06284817968409,14.497288729051,6.74617759297148,9.97562183502578,8.19521307619844,3.8897074730927,4.82110274044359,7.53758384645058,6.00066165064361,6.79915688888351,5.77654577265267,6.82282471762253,7.60437899670719,5.84741658296836,5.24392441831341,6.40251524048693,5.16919220600519,6.19181798667996,4.86714168968393,5.01563973205633,4.53294490883637,6.91834924631667,4.80016953339582,6.92155644021416,5.24559617884106,6.1045494985578,4.98779716201252,5.33072029717562,5.85369513192872,5.5244639401947,5.97538100921792,6.73370725989286,7.82991119619549,4.62971067165148,6.95692773388472,6.66228417099654,5.98010494041538,5.9954538705107,6.55008503647143,5.58664740525576,6.31251495827183,4.63241980150983,3.70988536992674
|short_description=p3@Arrb1
|short_description=p3@Arrb1
}}
}}

Latest revision as of 14:17, 25 September 2015

Short description:p3@Arrb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arrb1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000098266, NM_177231, NM_178220, uc009ilu.1, uc009ilv.1_5end
EntrezGene:Arrb1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Arrb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.07
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.70
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.67
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.03
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A48.50
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.67
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I334.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.07
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.55
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G811.30
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H38.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C311.94
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C86.29
Mouse Microglia, donor2.CNhs12634.11736-123E84.61
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.06
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.88
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.08
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.77
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E513.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G310.44
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.80
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.65
accessory axillary lymph node, adult.CNhs10475.1063-29H97.51
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I16.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C16.58
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H14.77
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A66.63
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I29.84
colon, adult.CNhs10468.36-18H77.41
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.21
corpora quadrigemina, adult.CNhs10501.16-22A423.52
corpus striatum, adult.CNhs10487.19-21D819.67
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D517.56
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F215.58
diencephalon, neonate N30.CNhs11201.1388-42B213.47
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.05
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.23
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C63.38
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D46.33
eyeball, neonate N00.CNhs11207.633-15C610.61
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G811.53
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H27.19
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I67.36
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E96.63
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C83.94
heart, embryo E16.CNhs11021.457-17C65.86
heart, embryo E17.CNhs11025.479-18E54.42
heart, embryo E18.CNhs11030.1283-20G37.51
heart, neonate N00.CNhs11213.639-21E37.36
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G13.61
heart, neonate N16.CNhs11209.782-15G12.51
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G114.72
intestinal mucosa, adult.CNhs10506.860-29I34.30
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I510.02
intestine, embryo E13.CNhs11010.381-16D58.59
intestine, embryo E15.CNhs10602.976-16D89.02
intestine, embryo E16.CNhs10585.463-22H48.07
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E39.51
intestine, neonate N30.CNhs11131.1384-42G19.16
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F85.71
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.74
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G77.08
kidney, neonate N10.CNhs11206.758-6D59.55
kidney, neonate N20.CNhs11113.832-19I16.20
kidney, neonate N25.CNhs11122.1353-25F35.34
kidney, neonate N30.CNhs11203.1385-42H16.91
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H610.02
liver, embryo E14.CNhs10594.409-16E17.87
liver, embryo E15.CNhs10520.433-16D77.30
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G25.49
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B112.93
lung, embryo E12.CNhs10522.354-16G28.15
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C58.15
lung, embryo E16.CNhs10998.458-17B68.92
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C69.37
lung, neonate N06.CNhs11212.683-20E516.39
lung, neonate N07.CNhs11111.715-19A318.16
lung, neonate N10.CNhs11219.750-23E612.92
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C710.36
lung, neonate N30.CNhs11133.1394-42H212.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H28.55
medulla oblongata, adult.CNhs10477.17-12C214.61
medulla oblongata, neonate N30.CNhs11200.1396-42A313.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.60
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.47
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I77.66
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G610.72
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.96
pituitary gland, embryo E13.CNhs11009.370-44C77.37
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F66.42
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E98.83
placenta, adult pregnant day10.CNhs10472.539-13I75.87
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F88.60
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G45.17
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I52.86
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C911.68
spleen, adult.CNhs10465.25-2G27.69
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D18.48
spleen, neonate N20.CNhs11112.824-19H18.61
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E310.76
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D55.02
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B87.01
stomach, neonate N07.CNhs11210.718-18A99.09
stomach, neonate N25.CNhs11104.1355-25E47.85
stomach, neonate N30.CNhs11134.1386-42I17.39
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C57.11
testis, embryo E16.CNhs11033.470-26G57.58
testis, embryo E17.CNhs11029.486-18I58.78
testis, embryo E18.CNhs11027.503-18G510.14
testis, neonate N00.CNhs11189.1300-22B78.33
testis, neonate N07.CNhs11222.726-26I44.17
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I24.21
thymus, embryo E16.CNhs11002.456-26C54.03
thymus, embryo E17.CNhs10581.478-18C15.37
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C74.14
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D35.33
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G73.66
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E58.42
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F816.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.68
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A914.50
whole body, embryo E11.CNhs11014.324-5I86.75
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D23.89
whole body, embryo E14.CNhs10519.395-14B14.82
whole body, embryo E16.CNhs10514.453-14F27.54
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G55.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.52
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F95.98
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C25.59
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B43.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.36e-0723
neuroblast (sensu Vertebrata)1.36e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system6.25e-1154
central nervous system3.19e-1073
gray matter4.61e-1034
neural tube4.84e-1052
neural rod4.84e-1052
future spinal cord4.84e-1052
neural keel4.84e-1052
brain grey matter9.91e-1029
regional part of telencephalon9.91e-1029
telencephalon9.91e-1029
brain1.31e-0947
future brain1.31e-0947
neurectoderm1.53e-0964
neural plate1.53e-0964
presumptive neural plate1.53e-0964
regional part of brain4.35e-0946
nervous system5.29e-0975
pre-chordal neural plate5.97e-0949
anterior neural tube8.46e-0940
regional part of forebrain3.04e-0839
forebrain3.04e-0839
future forebrain3.04e-0839
ectoderm-derived structure2.31e-0795
ectoderm2.31e-0795
presumptive ectoderm2.31e-0795
lung3.08e-0714
respiratory tube3.08e-0714
respiration organ3.08e-0714
pair of lungs3.08e-0714
lung primordium3.08e-0714
lung bud3.08e-0714
epithelial bud9.21e-0717
cerebral cortex9.87e-0721
cerebral hemisphere9.87e-0721
pallium9.87e-0721
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