FFCP PHASE1:Mm9::chr5:137463258..137463284,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26433 | |EntrezGene=26433 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1750 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENSMUST00000129896_5end | |association_with_transcript=10bp_to_ENSMUST00000129896_5end | ||
|cluster_id=chr5:137463258..137463284,+ | |||
|description=CAGE_peak_2_at_Plod3_5end | |description=CAGE_peak_2_at_Plod3_5end | ||
|id=chr5:137463258..137463284,+ | |id=chr5:137463258..137463284,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.16e-08!50;CL:0000221!4.38e-07!44;CL:0000133!4.38e-07!44;CL:0000333!7.69e-07!10;CL:0000095!7.69e-07!10;CL:0000243!7.69e-07!10;CL:0000123!7.69e-07!10;CL:0000125!7.69e-07!10;CL:0000030!7.69e-07!10;CL:0000339!7.69e-07!10 | |ontology_enrichment_celltype=CL:0000055!1.16e-08!50;CL:0000221!4.38e-07!44;CL:0000133!4.38e-07!44;CL:0000333!7.69e-07!10;CL:0000095!7.69e-07!10;CL:0000243!7.69e-07!10;CL:0000123!7.69e-07!10;CL:0000125!7.69e-07!10;CL:0000030!7.69e-07!10;CL:0000339!7.69e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,5.37e-07,10;CL:0000095,5.37e-07,10;CL:0000243,5.37e-07,10;CL:0000123,5.37e-07,10;CL:0000125,5.37e-07,10;CL:0000030,5.37e-07,10;CL:0000339,5.37e-07,10;CL:0002453,7.79e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.90e-08!23;UBERON:0001009!1.90e-08!23;UBERON:0004872!6.17e-07!33 | |ontology_enrichment_uberon=UBERON:0004535!1.90e-08!23;UBERON:0001009!1.90e-08!23;UBERON:0004872!6.17e-07!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.19e-08,23;UBERON:0001009,1.19e-08,23;UBERON:0004872,6.18e-07,33 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0,0.258246646883153,0,0,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0.411343300817216,1.27316895539409,2.29616883407888,0.992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0,0.332469290716985,0,3.34825304589526,1.5626706890476,1.0470474879476,4.1176204162171,4.09827290975067,3.88408282424923,4.02869817521847,3.85232338634155,3.48738829107195,21.9069576417451,10.4652075062614,12.0827400503959,8.55491555926847,4.89952475688769,11.5002051491977,0.335565212115473,1.45072428402269,1.00828139742739,5.40244815675489,12.6074713573053,3.09403255366465,1.61853168687678,1.05798195854407,1.90149421051854,5.76035704517525,5.33576877666684,3.1496490104849,2.96659908770092,4.9733608046227,9.58720353658895,11.9107674649682,0.933206510776299,1.35005938331691,0.630974884054146,5.42736870367227,3.53389665522582,0.61245399607477,0.862609239164127,0.919218786610021,4.40463523997555,1.91531007127782,2.30409799884365,1.58263545276233,1.28082701043374,2.08365348222704,2.79182999001381,2.8138130501584,2.75036845998258,2.65165726926301,2.98980529678116,3.54158947068071,2.80186915332781,2.72057616384428,7.8263411949453,0.860423876981386,0,1.07940638327563,1.94932925234301,1.34408066129201,0.983110940922263,3.40860645156115,1.55871602761721,1.7666978725517,4.08445917352373,7.69958864485907,12.7402619853323,21.3320010945999,1.29894624606728,0,0,0.5709193985953,0.776813650941515,0.890652834388949,2.77576522825817,3.65358573974569,2.99800146432876,2.41156224884196,1.52865319276416,2.76466500925286,3.70792451601561,3.32578520915797,1.76922110389975,3.88240439873782,1.98757366614354,1.93950101254089,0,2.34224637609238,1.46612694769419,0.255457055208591,1.7972268675888,1.19980546198682,3.93917703926501,1.19832511523858,0.915001205637253,1.38219787324151,0.173824320192276,1.79000820131231,0.62336413367868,1.46017136760982,4.07357455401265,2.61254638281195,0.758168275301024,0.841767423545896,1.30120442962704,3.90833577536904,2.70093194708024,3.0140963567143,2.31324097114515,1.40925092313335,2.52994656311268,0.776110112217047,1.07783996466421,2.08016688184601,1.93546236580344,1.7535658594206,1.66828349535359,3.1342694986995,2.26360350048738,3.58261680273288,2.1066395619397,3.08817488537658,5.96743348730745,4.34964122324554,3.28336483973535,2.34080679899319,3.31442629819294,3.34499193970586,2.77680803197281,4.18561100550734,4.29237442239391,2.45207218971056,2.63295759861569,3.11918181750281,2.1888578577381,2.92399974850665,2.19550115291051,2.68412837520744,0.420579897128254,1.02904612379284,0,1.32225283331772,2.55945900642281,0.464473343720877,1.67527699718721,0.403367049246685,0.444756087689741,1.33157938278791,0.474529061544512,0.494096864172033,0.754005626400808,1.59165177632921,1.36474860983384,0,0,0.597423819763102,2.0863469104839,2.28497025219458,3.38123207019241,1.01825663922657,1.93952487167626,2.24434623649019,2.71917109634306,2.36176236767363,1.8839847340965,1.72756029490521,0.592905254174298,1.83529616287703,1.57247196090562,0.224862112384854,1.01430060694251,0.72353147925725,2.03700681425136,1.72617682470486,0.648540907100142,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.26289438973556,0.179397413521912,0.482443521363367,2.58654466233247,2.65287976478679,1.46668478797823,3.05541154395339,0.704070744865506,2.84760637651087,3.80869825417622,4.87834119644497,2.52216230569906,2.87904096543407,3.6674596791222,2.62181303545181,4.14443956478149,3.90552458170081,4.52373851817817,2.71952841909355,0.983528546038072,1.10374698521893,1.9266070798535,2.34423373184406,0.327869890753351,3.53459298086122,3.15508219416257,2.73307121007647,2.15423397732799,1.91175038362042,3.11918143715352,3.39691836946599,2.02405350837447,5.26060544240361,3.95287777946523,0.321321316421807,1.56134093729095,4.62970569534864,1.62886959353576,2.63952196756057,2.65490276679926,3.15614827001476,2.41858845571801,0.754420319023592,2.95301892880773,1.53717573971964,2.32585463851399,1.81766864738753,1.06949213515416,0.632073515871632,3.16255825724996,1.03135543248187,1.02131881726136,2.34079422240703,2.45781499187234,3.00071849044229,2.12808280370728,3.38900753443934,2.30368628842969,4.56697423671899,3.75474732901937,11.0152676849186,1.54369878638473,0.65954501176592,0.968786560175433,1.56813604813205,0.358117032009409,0.984845398470368,0.582961673259701,3.15223013417866,1.19609616558497,2.68302928352189,0.925972636848558,0.188368457004691,0.27338845544205,0.686334519619568,0.679913719975421,0.559805809294632,0.967399816630967,0.954670618015114,1.42351197111511,1.82987520414164,0.432021363287205,2.29997125615916,1.09181281873089,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,1.12738587736838,3.13984746692355,2.31641886639937,2.52786544847262,3.7456348808542,2.53434188236167,3.28600268208111,1.8228613878153,2.20204623293993,2.65742532908607,2.30424005006292,0.632022241256357,1.41907650703115,1.02710957164827,0.649604114888975,1.43221356533985,1.19208812868759,0.480781798079875,1.03382669022204,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,1.77588762699252,2.87084341150322,2.01461539636894,1.35232715822533,2.81523713176773,2.01466786693992,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.515559547031063,1.37016503954128,1.5107877947794,2.02506750069542,0,0.906284817968409,1.03552062350364,0.518936737920883,0.798049746802062,1.02440163452481,2.67417388775123,0.209613162627982,1.10306105070008,2.00022055021454,1.64828045791115,1.28367683836726,3.03236654116557,3.29523089857312,2.26351609663291,1.68554713445788,2.30490548657529,2.06767688240208,1.42888107384922,2.31768651889711,1.73618298417335,2.06042950401653,0.735994600671987,1.71434626192708,1.06485483695602,2.38436189947321,2.0348498328526,3.01150017329058,2.62305284464197,2.56099162021882,1.8414879800649,1.90125759384206,1.68342681497322,1.89816028998679,2.46261205938909,3.27384834535751,1.70430525304563,1.54325288784913,1.74867404556562,2.33931608445408,1.50409737833809,2.67803664896381,2.64709702943419,2.08681052058379 | |phase1_expression=2.88267924788629,0,0,0,0,0.33575854382378,0,0.258246646883153,0,0,0,0,0.342401459862411,0.262261207256992,0,0.202475267389826,0,0.473193248037357,0.411343300817216,1.27316895539409,2.29616883407888,0.992909512008853,0.261199789138935,0.159992422793407,0.22940928106717,0,0,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0.61506478758457,0,0,0.332469290716985,0,3.34825304589526,1.5626706890476,1.0470474879476,4.1176204162171,4.09827290975067,3.88408282424923,4.02869817521847,3.85232338634155,3.48738829107195,21.9069576417451,10.4652075062614,12.0827400503959,8.55491555926847,4.89952475688769,11.5002051491977,0.335565212115473,1.45072428402269,1.00828139742739,5.40244815675489,12.6074713573053,3.09403255366465,1.61853168687678,1.05798195854407,1.90149421051854,5.76035704517525,5.33576877666684,3.1496490104849,2.96659908770092,4.9733608046227,9.58720353658895,11.9107674649682,0.933206510776299,1.35005938331691,0.630974884054146,5.42736870367227,3.53389665522582,0.61245399607477,0.862609239164127,0.919218786610021,4.40463523997555,1.91531007127782,2.30409799884365,1.58263545276233,1.28082701043374,2.08365348222704,2.79182999001381,2.8138130501584,2.75036845998258,2.65165726926301,2.98980529678116,3.54158947068071,2.80186915332781,2.72057616384428,7.8263411949453,0.860423876981386,0,1.07940638327563,1.94932925234301,1.34408066129201,0.983110940922263,3.40860645156115,1.55871602761721,1.7666978725517,4.08445917352373,7.69958864485907,12.7402619853323,21.3320010945999,1.29894624606728,0,0,0.5709193985953,0.776813650941515,0.890652834388949,2.77576522825817,3.65358573974569,2.99800146432876,2.41156224884196,1.52865319276416,2.76466500925286,3.70792451601561,3.32578520915797,1.76922110389975,3.88240439873782,1.98757366614354,1.93950101254089,0,2.34224637609238,1.46612694769419,0.255457055208591,1.7972268675888,1.19980546198682,3.93917703926501,1.19832511523858,0.915001205637253,1.38219787324151,0.173824320192276,1.79000820131231,0.62336413367868,1.46017136760982,4.07357455401265,2.61254638281195,0.758168275301024,0.841767423545896,1.30120442962704,3.90833577536904,2.70093194708024,3.0140963567143,2.31324097114515,1.40925092313335,2.52994656311268,0.776110112217047,1.07783996466421,2.08016688184601,1.93546236580344,1.7535658594206,1.66828349535359,3.1342694986995,2.26360350048738,3.58261680273288,2.1066395619397,3.08817488537658,5.96743348730745,4.34964122324554,3.28336483973535,2.34080679899319,3.31442629819294,3.34499193970586,2.77680803197281,4.18561100550734,4.29237442239391,2.45207218971056,2.63295759861569,3.11918181750281,2.1888578577381,2.92399974850665,2.19550115291051,2.68412837520744,0.420579897128254,1.02904612379284,0,1.32225283331772,2.55945900642281,0.464473343720877,1.67527699718721,0.403367049246685,0.444756087689741,1.33157938278791,0.474529061544512,0.494096864172033,0.754005626400808,1.59165177632921,1.36474860983384,0,0,0.597423819763102,2.0863469104839,2.28497025219458,3.38123207019241,1.01825663922657,1.93952487167626,2.24434623649019,2.71917109634306,2.36176236767363,1.8839847340965,1.72756029490521,0.592905254174298,1.83529616287703,1.57247196090562,0.224862112384854,1.01430060694251,0.72353147925725,2.03700681425136,1.72617682470486,0.648540907100142,0.823684239564244,1.43768206527355,2.60498663367952,1.5601883655728,1.26289438973556,0.179397413521912,0.482443521363367,2.58654466233247,2.65287976478679,1.46668478797823,3.05541154395339,0.704070744865506,2.84760637651087,3.80869825417622,4.87834119644497,2.52216230569906,2.87904096543407,3.6674596791222,2.62181303545181,4.14443956478149,3.90552458170081,4.52373851817817,2.71952841909355,0.983528546038072,1.10374698521893,1.9266070798535,2.34423373184406,0.327869890753351,3.53459298086122,3.15508219416257,2.73307121007647,2.15423397732799,1.91175038362042,3.11918143715352,3.39691836946599,2.02405350837447,5.26060544240361,3.95287777946523,0.321321316421807,1.56134093729095,4.62970569534864,1.62886959353576,2.63952196756057,2.65490276679926,3.15614827001476,2.41858845571801,0.754420319023592,2.95301892880773,1.53717573971964,2.32585463851399,1.81766864738753,1.06949213515416,0.632073515871632,3.16255825724996,1.03135543248187,1.02131881726136,2.34079422240703,2.45781499187234,3.00071849044229,2.12808280370728,3.38900753443934,2.30368628842969,4.56697423671899,3.75474732901937,11.0152676849186,1.54369878638473,0.65954501176592,0.968786560175433,1.56813604813205,0.358117032009409,0.984845398470368,0.582961673259701,3.15223013417866,1.19609616558497,2.68302928352189,0.925972636848558,0.188368457004691,0.27338845544205,0.686334519619568,0.679913719975421,0.559805809294632,0.967399816630967,0.954670618015114,1.42351197111511,1.82987520414164,0.432021363287205,2.29997125615916,1.09181281873089,0.674321731924103,0.991841468704031,1.30877970992015,0.648074866458964,0.621339313086926,1.12738587736838,3.13984746692355,2.31641886639937,2.52786544847262,3.7456348808542,2.53434188236167,3.28600268208111,1.8228613878153,2.20204623293993,2.65742532908607,2.30424005006292,0.632022241256357,1.41907650703115,1.02710957164827,0.649604114888975,1.43221356533985,1.19208812868759,0.480781798079875,1.03382669022204,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.680191150845634,1.77588762699252,2.87084341150322,2.01461539636894,1.35232715822533,2.81523713176773,2.01466786693992,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.515559547031063,1.37016503954128,1.5107877947794,2.02506750069542,0,0.906284817968409,1.03552062350364,0.518936737920883,0.798049746802062,1.02440163452481,2.67417388775123,0.209613162627982,1.10306105070008,2.00022055021454,1.64828045791115,1.28367683836726,3.03236654116557,3.29523089857312,2.26351609663291,1.68554713445788,2.30490548657529,2.06767688240208,1.42888107384922,2.31768651889711,1.73618298417335,2.06042950401653,0.735994600671987,1.71434626192708,1.06485483695602,2.38436189947321,2.0348498328526,3.01150017329058,2.62305284464197,2.56099162021882,1.8414879800649,1.90125759384206,1.68342681497322,1.89816028998679,2.46261205938909,3.27384834535751,1.70430525304563,1.54325288784913,1.74867404556562,2.33931608445408,1.50409737833809,2.67803664896381,2.64709702943419,2.08681052058379 | ||
|short_description=p2@Plod3 | |short_description=p2@Plod3 | ||
}} | }} |
Latest revision as of 14:17, 25 September 2015
Short description: | p2@Plod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Plod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1750 |
Association with transcript: | 10bp_to_ENSMUST00000129896_5end |
EntrezGene: | Plod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 5.37e-07 | 10 |
neuron associated cell | 5.37e-07 | 10 |
glial cell (sensu Vertebrata) | 5.37e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.37e-07 | 10 |
glial cell | 5.37e-07 | 10 |
glioblast | 5.37e-07 | 10 |
glioblast (sensu Vertebrata) | 5.37e-07 | 10 |
oligodendrocyte precursor cell | 7.79e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.19e-08 | 23 |
circulatory system | 1.19e-08 | 23 |
splanchnic layer of lateral plate mesoderm | 6.18e-07 | 33 |