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FFCP PHASE1:Mm9::chr10:108448011..108448039,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20979
|EntrezGene=20979
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=P46096
|UniProt=P46096
|association_with_transcript=0bp_to_ENSMUST00000064054,ENSMUST00000105276,ENSMUST00000146618,NM_001252341,NM_001252342,NM_009306_5end
|association_with_transcript=0bp_to_ENSMUST00000064054,ENSMUST00000105276,ENSMUST00000146618,NM_001252341,NM_001252342,NM_009306_5end
|cluster_id=chr10:108448011..108448039,-
|description=CAGE_peak_3_at_Syt1_5end
|description=CAGE_peak_3_at_Syt1_5end
|id=chr10:108448011..108448039,-
|id=chr10:108448011..108448039,-
|ontology_enrichment_celltype=CL:0000540!2.05e-15!33;CL:0000047!2.05e-15!33;CL:0000031!2.05e-15!33;CL:0000404!2.05e-15!33;CL:0000117!3.52e-13!23;CL:0000337!3.52e-13!23;CL:0000393!1.93e-11!39;CL:0000211!1.93e-11!39;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0002319!2.07e-10!43;CL:0000055!1.86e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000540,3.86e-18,33;CL:0000047,3.86e-18,33;CL:0000031,3.86e-18,33;CL:0000404,3.86e-18,33;CL:0000117,1.83e-15,23;CL:0000337,1.83e-15,23;CL:0000393,3.27e-13,39;CL:0000211,3.27e-13,39;CL:0000221,6.89e-11,44;CL:0000133,6.89e-11,44;CL:0002319,8.90e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.46e-30!71;UBERON:0003075!1.46e-30!71;UBERON:0007284!1.46e-30!71;UBERON:0001017!3.09e-29!73;UBERON:0005743!3.09e-29!73;UBERON:0000073!7.15e-29!75;UBERON:0001016!7.15e-29!75;UBERON:0004121!6.22e-28!102;UBERON:0000924!6.22e-28!102;UBERON:0006601!6.22e-28!102;UBERON:0000033!3.44e-26!63;UBERON:0001049!3.59e-24!52;UBERON:0005068!3.59e-24!52;UBERON:0006241!3.59e-24!52;UBERON:0007135!3.59e-24!52;UBERON:0003056!6.23e-24!49;UBERON:0000955!1.57e-23!50;UBERON:0006238!1.57e-23!50;UBERON:0002616!9.90e-23!49;UBERON:0003080!3.03e-20!40;UBERON:0002780!1.49e-19!39;UBERON:0001890!1.49e-19!39;UBERON:0006240!1.49e-19!39;UBERON:0002020!1.37e-18!34;UBERON:0007811!5.23e-17!86;UBERON:0002791!9.54e-16!29;UBERON:0003528!9.54e-16!29;UBERON:0001893!9.54e-16!29;UBERON:0000153!2.08e-15!94;UBERON:0000956!4.09e-11!21;UBERON:0001869!4.09e-11!21;UBERON:0000203!4.09e-11!21;UBERON:0002619!3.08e-09!17;UBERON:0002021!5.65e-08!10;UBERON:0000411!5.65e-08!10;UBERON:0001950!5.65e-08!10;UBERON:0000468!7.30e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.67e-34,64;UBERON:0003075,1.67e-34,64;UBERON:0007284,1.67e-34,64;UBERON:0001017,5.01e-34,73;UBERON:0001016,2.52e-32,75;UBERON:0000073,2.96e-30,54;UBERON:0004121,3.16e-30,95;UBERON:0000924,3.16e-30,95;UBERON:0006601,3.16e-30,95;UBERON:0010371,8.58e-29,73;UBERON:0001049,2.62e-28,52;UBERON:0005068,2.62e-28,52;UBERON:0006241,2.62e-28,52;UBERON:0007135,2.62e-28,52;UBERON:0003056,2.07e-27,49;UBERON:0000955,6.20e-25,47;UBERON:0006238,6.20e-25,47;UBERON:0002616,5.33e-24,46;UBERON:0010314,2.15e-23,92;UBERON:0003080,5.39e-23,40;UBERON:0002780,3.57e-22,39;UBERON:0001890,3.57e-22,39;UBERON:0006240,3.57e-22,39;UBERON:0002020,5.50e-21,34;UBERON:0003528,1.34e-17,29;UBERON:0002791,1.34e-17,29;UBERON:0001893,1.34e-17,29;UBERON:0000956,4.21e-12,21;UBERON:0001869,4.21e-12,21;UBERON:0000203,4.21e-12,21;UBERON:0002619,7.22e-10,17;UBERON:0002021,3.08e-09,10;UBERON:0000411,3.08e-09,10;UBERON:0001950,3.08e-09,10;UBERON:0002420,8.85e-07,8;UBERON:0007245,8.85e-07,8;UBERON:0010009,8.85e-07,8;UBERON:0010011,8.85e-07,8;UBERON:0000454,8.85e-07,8
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,35.20306418957,21.6886301501533,29.1562445612842,0,0,0,0,0,0.299600110518405,0.384218305321555,14.3091664985699,11.0704869431986,10.9368979902719,41.7050437229553,39.3146002893872,19.1085646775328,15.2394298918996,14.7075005857603,68.271846219621,122.32446988561,115.051293408926,38.2470234417562,38.3333226694096,35.4221091978597,73.7043117363646,62.4666497135165,93.0541328960774,52.1492596288392,54.9554687884537,36.1614924901083,0.37863096666592,0.906858721281426,0,0,0,0,0,0,3.93244376368905,0,0,0,1.97180787687353,0,0,0,0,0,0,2.8545969929765,1.03575153458869,6.23456984072264,4.16364784238726,2.74018930480927,3.22861696158482,3.91878865436819,6.11461277105665,1.88499886994513,0,0.86759614151947,0,0,0,0,0,68.8034872977136,58.6450779077674,0.255457055208591,0,0,0,96.9145436949203,100.650132620098,42.7224797183739,131.932659025938,119.419118573264,126.958495225891,104.970097204839,0.509196819251581,0,0,27.988766832901,1.82168620147785,6.66716102857071,10.2635413989049,10.7000420663358,14.8999933141408,19.4732854832972,24.17504493641,53.5515977429762,0,0.378212160335639,0.879755620819744,0.657587197282725,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0.134206418760372,128.487158572682,34.6788543718189,0,0.528901133327089,0.639864751605702,1.85789337488351,2.83508414908605,2.01683524623343,2.2237804384487,0.760902504450237,0,0.494096864172033,1.00534083520108,0.596869416123452,1.75467678407208,1.79763881730844,0,0.597423819763102,0.189667900953082,1.02823661348756,0,1.01825663922657,0.387904974335251,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0.275936746304732,48.4862781763132,54.6206459519667,0,0,8.83423014365519,7.41833614163613,11.6328634775711,1.91175038362042,3.11918143715352,4.24614796183249,7.69140333182299,10.8134667427185,11.0680577825027,145.8798776555,1.41940085208269,1.24645922567079,1.14020871547503,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,1.8962205476149,0,0,46.640225988269,2.52085531643834,1.94038025674132,5.78709994585299,9.22169214939823,11.0588666913284,14.8094118541909,12.7875278628132,0,0,2.20528398054962,0,0,0.0603129249281559,0,0,0.582961673259701,40.6081411403016,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,1.58167996790568,2.64315307264903,1.40406943068342,1.04544148007234,1.09181281873089,2.02296519577231,0.661227645802687,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.827292452285488,2.91676782516071,2.58319646955462,2.87225413334323,3.28600268208111,1.17183946359555,0.734015410979976,0.241584120826006,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.685861259894999,0.302478555410522,1.26695244961678,0.962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.15913756419314,0,0.36630324853453,0.214368379079066,0,97.1373169301354,107.255780106172,103.121192419091,77.6776384193468,91.1159751294954,96.6904188658817,106.653555036625,105.375161554468,91.5347666148093,115.978309832408,1.45302286617847,3.59122386060928,5.12200817262403,4.86213434136588,5.44994222832754,8.27295788025063,7.77863547305653,6.79915688888351,6.4183841918363,10.3605856823157,10.1391719956096,9.05406438653166,7.30403758265083,9.02754648908657,11.2573519153002,5.71552429539688,9.85016770531272,8.48800570040302,8.24171801606613,7.50714492685426,5.82877729055206,6.03417740941747,5.48403236878838,8.28474574804273,6.58765662907314,7.27685627868418,7.86590283352922,7.89209134313529,7.06181391998481,5.05028044491965,8.77899134118889,7.09232273104057,5.32000356120596,10.0708946770878,7.71626443924566,11.7410971630835,7.71974307869848,8.16510005383534,2.67803664896381,1.76473135295612,2.55054619182464
|phase1_expression=5.60520964866779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.7945671233864,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,35.20306418957,21.6886301501533,29.1562445612842,0,0,0,0,0,0.299600110518405,0.384218305321555,14.3091664985699,11.0704869431986,10.9368979902719,41.7050437229553,39.3146002893872,19.1085646775328,15.2394298918996,14.7075005857603,68.271846219621,122.32446988561,115.051293408926,38.2470234417562,38.3333226694096,35.4221091978597,73.7043117363646,62.4666497135165,93.0541328960774,52.1492596288392,54.9554687884537,36.1614924901083,0.37863096666592,0.906858721281426,0,0,0,0,0,0,3.93244376368905,0,0,0,1.97180787687353,0,0,0,0,0,0,2.8545969929765,1.03575153458869,6.23456984072264,4.16364784238726,2.74018930480927,3.22861696158482,3.91878865436819,6.11461277105665,1.88499886994513,0,0.86759614151947,0,0,0,0,0,68.8034872977136,58.6450779077674,0.255457055208591,0,0,0,96.9145436949203,100.650132620098,42.7224797183739,131.932659025938,119.419118573264,126.958495225891,104.970097204839,0.509196819251581,0,0,27.988766832901,1.82168620147785,6.66716102857071,10.2635413989049,10.7000420663358,14.8999933141408,19.4732854832972,24.17504493641,53.5515977429762,0,0.378212160335639,0.879755620819744,0.657587197282725,0,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0.414251545071004,1.17263029990548,0.720248245844059,0.473489471170421,0.196764231747404,0.308534225774757,0.232533944750408,0,0.233530684734339,0,0,0,0,0,0.134206418760372,128.487158572682,34.6788543718189,0,0.528901133327089,0.639864751605702,1.85789337488351,2.83508414908605,2.01683524623343,2.2237804384487,0.760902504450237,0,0.494096864172033,1.00534083520108,0.596869416123452,1.75467678407208,1.79763881730844,0,0.597423819763102,0.189667900953082,1.02823661348756,0,1.01825663922657,0.387904974335251,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0.476087281772027,0.195133647857799,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0,0,0,0,0.275936746304732,48.4862781763132,54.6206459519667,0,0,8.83423014365519,7.41833614163613,11.6328634775711,1.91175038362042,3.11918143715352,4.24614796183249,7.69140333182299,10.8134667427185,11.0680577825027,145.8798776555,1.41940085208269,1.24645922567079,1.14020871547503,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,1.8962205476149,0,0,46.640225988269,2.52085531643834,1.94038025674132,5.78709994585299,9.22169214939823,11.0588666913284,14.8094118541909,12.7875278628132,0,0,2.20528398054962,0,0,0.0603129249281559,0,0,0.582961673259701,40.6081411403016,0,0,0,0,0.136694227721025,0.457556346413045,0,0,0,0,1.58167996790568,2.64315307264903,1.40406943068342,1.04544148007234,1.09181281873089,2.02296519577231,0.661227645802687,0.523511883968059,0.648074866458964,0,0,0.747582730219894,0.827292452285488,2.91676782516071,2.58319646955462,2.87225413334323,3.28600268208111,1.17183946359555,0.734015410979976,0.241584120826006,0,0.316011120628178,0.608175645870493,0.308132871494482,0.51968329191118,0.716106782669926,0.39736270956253,0.360586348559907,0.590758108698309,0.302899349844443,0.685861259894999,0.302478555410522,1.26695244961678,0.962118416403295,0.584384510907845,0.226730383615211,0,0,0,1.15913756419314,0,0.36630324853453,0.214368379079066,0,97.1373169301354,107.255780106172,103.121192419091,77.6776384193468,91.1159751294954,96.6904188658817,106.653555036625,105.375161554468,91.5347666148093,115.978309832408,1.45302286617847,3.59122386060928,5.12200817262403,4.86213434136588,5.44994222832754,8.27295788025063,7.77863547305653,6.79915688888351,6.4183841918363,10.3605856823157,10.1391719956096,9.05406438653166,7.30403758265083,9.02754648908657,11.2573519153002,5.71552429539688,9.85016770531272,8.48800570040302,8.24171801606613,7.50714492685426,5.82877729055206,6.03417740941747,5.48403236878838,8.28474574804273,6.58765662907314,7.27685627868418,7.86590283352922,7.89209134313529,7.06181391998481,5.05028044491965,8.77899134118889,7.09232273104057,5.32000356120596,10.0708946770878,7.71626443924566,11.7410971630835,7.71974307869848,8.16510005383534,2.67803664896381,1.76473135295612,2.55054619182464
|short_description=p3@Syt1
|short_description=p3@Syt1
}}
}}

Latest revision as of 14:11, 25 September 2015

Short description:p3@Syt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Syt1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000064054, ENSMUST00000105276, ENSMUST00000146618, NM_001252341, NM_001252342, NM_009306_5end
EntrezGene:Syt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Syt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C335.20
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C729.16
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F141.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.11
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D368.27
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3122.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7115.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D438.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E473.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E562.47
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I693.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D652.15
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F654.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.16
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D76.23
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C16.11
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B268.80
cerebellum, neonate N30.CNhs11135.1395-42I258.65
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A496.91
corpus striatum, adult.CNhs10487.19-21D8100.65
corpus striatum, neonate N00.CNhs11226.630-43F142.72
cortex, adult.CNhs10473.12-14D5131.93
cortex, neonate N30.CNhs11107.1392-42F2119.42
diencephalon, adult.CNhs10482.20-12F2126.96
diencephalon, neonate N30.CNhs11201.1388-42B2104.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G427.99
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C910.26
eyeball, embryo E17.CNhs11023.1261-18D410.70
eyeball, neonate N00.CNhs11207.633-15C614.90
eyeball, neonate N01.CNhs11140.1532-43E719.47
eyeball, neonate N02.CNhs11205.1551-44G824.18
eyeball, neonate N16.CNhs11188.777-19A253.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E8128.49
hippocampus, neonate N00.CNhs11228.627-43G134.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C248.49
medulla oblongata, neonate N30.CNhs11200.1396-42A354.62
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.42
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.81
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I9145.88
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G846.64
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F611.06
pituitary gland, embryo E17.CNhs11039.1265-44F514.81
pituitary gland, neonate N00.CNhs11190.1308-22E912.79
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C940.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.87
testis, neonate N00.CNhs11189.1300-22B73.29
testis, neonate N07.CNhs11222.726-26I41.17
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A197.14
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2107.26
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3103.12
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D777.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A491.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A596.69
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6106.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7105.38
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A891.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9115.98
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B15.45
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.36
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.03
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.51
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.07
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I511.74
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D11.76
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron3.86e-1833
neuronal stem cell3.86e-1833
neuroblast3.86e-1833
electrically signaling cell3.86e-1833
CNS neuron (sensu Vertebrata)1.83e-1523
neuroblast (sensu Vertebrata)1.83e-1523
electrically responsive cell3.27e-1339
electrically active cell3.27e-1339
ectodermal cell6.89e-1144
neurectodermal cell6.89e-1144
neural cell8.90e-1143

Uber anatomy
Ontology termp-valuen
neurectoderm1.67e-3464
neural plate1.67e-3464
presumptive neural plate1.67e-3464
central nervous system5.01e-3473
nervous system2.52e-3275
regional part of nervous system2.96e-3054
ectoderm-derived structure3.16e-3095
ectoderm3.16e-3095
presumptive ectoderm3.16e-3095
ecto-epithelium8.58e-2973
neural tube2.62e-2852
neural rod2.62e-2852
future spinal cord2.62e-2852
neural keel2.62e-2852
pre-chordal neural plate2.07e-2749
brain6.20e-2547
future brain6.20e-2547
regional part of brain5.33e-2446
structure with developmental contribution from neural crest2.15e-2392
anterior neural tube5.39e-2340
regional part of forebrain3.57e-2239
forebrain3.57e-2239
future forebrain3.57e-2239
gray matter5.50e-2134
brain grey matter1.34e-1729
regional part of telencephalon1.34e-1729
telencephalon1.34e-1729
cerebral cortex4.21e-1221
cerebral hemisphere4.21e-1221
pallium4.21e-1221
regional part of cerebral cortex7.22e-1017
occipital lobe3.08e-0910
visual cortex3.08e-0910
neocortex3.08e-0910
basal ganglion8.85e-078
nuclear complex of neuraxis8.85e-078
aggregate regional part of brain8.85e-078
collection of basal ganglia8.85e-078
cerebral subcortex8.85e-078
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