FFCP PHASE1:Mm9::chr10:108447978..108448008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20979 | |EntrezGene=20979 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENSMUST00000146618_5end | |association_with_transcript=9bp_to_ENSMUST00000146618_5end | ||
|cluster_id=chr10:108447978..108448008,- | |||
|description=CAGE_peak_2_at_Syt1_5end | |description=CAGE_peak_2_at_Syt1_5end | ||
|id=chr10:108447978..108448008,- | |id=chr10:108447978..108448008,- | ||
|ontology_enrichment_celltype=CL:0000540!3.93e-15!33;CL:0000047!3.93e-15!33;CL:0000031!3.93e-15!33;CL:0000404!3.93e-15!33;CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000393!8.61e-11!39;CL:0000211!8.61e-11!39;CL:0002319!6.69e-09!43;CL:0000221!6.94e-09!44;CL:0000133!6.94e-09!44 | |ontology_enrichment_celltype=CL:0000540!3.93e-15!33;CL:0000047!3.93e-15!33;CL:0000031!3.93e-15!33;CL:0000404!3.93e-15!33;CL:0000117!2.06e-12!23;CL:0000337!2.06e-12!23;CL:0000393!8.61e-11!39;CL:0000211!8.61e-11!39;CL:0002319!6.69e-09!43;CL:0000221!6.94e-09!44;CL:0000133!6.94e-09!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.07e-16,33;CL:0000047,2.07e-16,33;CL:0000031,2.07e-16,33;CL:0000404,2.07e-16,33;CL:0000117,1.96e-13,23;CL:0000337,1.96e-13,23;CL:0000393,2.16e-11,39;CL:0000211,2.16e-11,39;CL:0002319,5.38e-10,43;CL:0000221,5.65e-10,44;CL:0000133,5.65e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.96e-30,64;UBERON:0003075,2.96e-30,64;UBERON:0007284,2.96e-30,64;UBERON:0001017,1.82e-29,73;UBERON:0001016,3.05e-29,75;UBERON:0000073,3.95e-26,54;UBERON:0004121,4.14e-26,95;UBERON:0000924,4.14e-26,95;UBERON:0006601,4.14e-26,95;UBERON:0010371,1.71e-24,73;UBERON:0001049,1.84e-24,52;UBERON:0005068,1.84e-24,52;UBERON:0006241,1.84e-24,52;UBERON:0007135,1.84e-24,52;UBERON:0003056,5.05e-24,49;UBERON:0000955,1.66e-21,47;UBERON:0006238,1.66e-21,47;UBERON:0002616,1.01e-20,46;UBERON:0003080,4.71e-20,40;UBERON:0010314,1.29e-19,92;UBERON:0002780,2.23e-19,39;UBERON:0001890,2.23e-19,39;UBERON:0006240,2.23e-19,39;UBERON:0002020,1.59e-18,34;UBERON:0003528,1.61e-15,29;UBERON:0002791,1.61e-15,29;UBERON:0001893,1.61e-15,29;UBERON:0000956,9.60e-11,21;UBERON:0001869,9.60e-11,21;UBERON:0000203,9.60e-11,21;UBERON:0002619,5.94e-09,17;UBERON:0002021,7.65e-09,10;UBERON:0000411,7.65e-09,10;UBERON:0001950,7.65e-09,10 | |||
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| ||
|short_description=p2@Syt1 | |short_description=p2@Syt1 | ||
}} | }} |
Latest revision as of 14:11, 25 September 2015
Short description: | p2@Syt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Syt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 9bp_to_ENSMUST00000146618_5end |
EntrezGene: | Syt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.07e-16 | 33 |
neuronal stem cell | 2.07e-16 | 33 |
neuroblast | 2.07e-16 | 33 |
electrically signaling cell | 2.07e-16 | 33 |
CNS neuron (sensu Vertebrata) | 1.96e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.96e-13 | 23 |
electrically responsive cell | 2.16e-11 | 39 |
electrically active cell | 2.16e-11 | 39 |
neural cell | 5.38e-10 | 43 |
ectodermal cell | 5.65e-10 | 44 |
neurectodermal cell | 5.65e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.96e-30 | 64 |
neural plate | 2.96e-30 | 64 |
presumptive neural plate | 2.96e-30 | 64 |
central nervous system | 1.82e-29 | 73 |
nervous system | 3.05e-29 | 75 |
regional part of nervous system | 3.95e-26 | 54 |
ectoderm-derived structure | 4.14e-26 | 95 |
ectoderm | 4.14e-26 | 95 |
presumptive ectoderm | 4.14e-26 | 95 |
ecto-epithelium | 1.71e-24 | 73 |
neural tube | 1.84e-24 | 52 |
neural rod | 1.84e-24 | 52 |
future spinal cord | 1.84e-24 | 52 |
neural keel | 1.84e-24 | 52 |
pre-chordal neural plate | 5.05e-24 | 49 |
brain | 1.66e-21 | 47 |
future brain | 1.66e-21 | 47 |
regional part of brain | 1.01e-20 | 46 |
anterior neural tube | 4.71e-20 | 40 |
structure with developmental contribution from neural crest | 1.29e-19 | 92 |
regional part of forebrain | 2.23e-19 | 39 |
forebrain | 2.23e-19 | 39 |
future forebrain | 2.23e-19 | 39 |
gray matter | 1.59e-18 | 34 |
brain grey matter | 1.61e-15 | 29 |
regional part of telencephalon | 1.61e-15 | 29 |
telencephalon | 1.61e-15 | 29 |
cerebral cortex | 9.60e-11 | 21 |
cerebral hemisphere | 9.60e-11 | 21 |
pallium | 9.60e-11 | 21 |
regional part of cerebral cortex | 5.94e-09 | 17 |
occipital lobe | 7.65e-09 | 10 |
visual cortex | 7.65e-09 | 10 |
neocortex | 7.65e-09 | 10 |